APTO-253_NCI-H2347 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description APTO-253 perturbation in NCI-H2347 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the APTO-253_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.262673
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.188703
POTEF POTE ankyrin domain family, member F 0.166439
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.141389
TXNRD1 thioredoxin reductase 1 0.14133
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.129156
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.115371
TRIO trio Rho guanine nucleotide exchange factor 0.114759
PABPC1 poly(A) binding protein, cytoplasmic 1 0.113976
TMSB10 thymosin beta 10 0.106444
S100A6 S100 calcium binding protein A6 0.104207
MT2A metallothionein 2A 0.102102
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0966915
ALCAM activated leukocyte cell adhesion molecule 0.0922475
ELL2 elongation factor, RNA polymerase II, 2 0.0854641
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.083726
PTMA prothymosin, alpha 0.0802003
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0764458
ENO1 enolase 1, (alpha) 0.0736813
FTH1 ferritin, heavy polypeptide 1 0.0727961
TXNIP thioredoxin interacting protein 0.0679565
IFI27 interferon, alpha-inducible protein 27 0.0646934
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0643138
MAP1B microtubule-associated protein 1B 0.0570474
RPLP1 ribosomal protein, large, P1 0.0565913
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0565818
SGMS2 sphingomyelin synthase 2 0.0562274
FN1 fibronectin 1 0.0559754
RPS19 ribosomal protein S19 0.0539506
S100A10 S100 calcium binding protein A10 0.0533777
RPL8 ribosomal protein L8 0.0481799
NPEPPS aminopeptidase puromycin sensitive 0.0461642
ADAM9 ADAM metallopeptidase domain 9 0.045435
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase 0.0452624
RNF145 ring finger protein 145 0.0423926
RUNX1 runt-related transcription factor 1 0.041735
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0414341
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0404965
KRT7 keratin 7, type II 0.0402203
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0396975
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0395762
RPLP0 ribosomal protein, large, P0 0.0390879
MSN moesin 0.0389046
LOC112694756 uncharaterized LOC112694756 0.0378088
EEF2 eukaryotic translation elongation factor 2 0.037571
HMGA1 high mobility group AT-hook 1 0.0373695
S100A9 S100 calcium binding protein A9 0.0373323
CD44 CD44 molecule (Indian blood group) 0.037159
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0369155
RPL32 ribosomal protein L32 0.0368826
KLF6 Kruppel-like factor 6 0.0368158
TSC22D2 TSC22 domain family, member 2 0.0360531
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0359485
ARHGAP42 Rho GTPase activating protein 42 0.03577
EZR ezrin 0.0355759
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 0.0354025
LAMB3 laminin, beta 3 0.0351808
PARD3 par-3 family cell polarity regulator 0.034949
DSG2 desmoglein 2 0.0347238
ANXA2 annexin A2 0.0345184
PPARG peroxisome proliferator-activated receptor gamma 0.0337851
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0333698
RASAL2 RAS protein activator like 2 0.0332386
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0327574
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0323803
LDHA lactate dehydrogenase A 0.032038
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0314528
GRAMD2B GRAM domain containing 2B 0.0313089
PDIA4 protein disulfide isomerase family A, member 4 0.0306137
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.0301706
NDRG1 N-myc downstream regulated 1 0.0300168
DST dystonin 0.0299955
DUSP10 dual specificity phosphatase 10 0.0297315
HSPA8 heat shock 70kDa protein 8 0.0291849
SEPTIN7 septin 7 0.0288774
CALR calreticulin 0.0286692
ERC2 ELKS/RAB6-interacting/CAST family member 2 0.0282821
NAMPT nicotinamide phosphoribosyltransferase 0.028253
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.027813
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.027777
C15ORF48 chromosome 15 open reading frame 48 0.0277288
UGCG UDP-glucose ceramide glucosyltransferase 0.0276251
IL6ST interleukin 6 signal transducer 0.0275245
YBX1 Y box binding protein 1 0.0275119
LGALS3 lectin, galactoside-binding, soluble, 3 0.0275032
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 0.0273392
GPX4 glutathione peroxidase 4 0.0265318
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.0262218
TPD52 tumor protein D52 0.0262205
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0262102
ARRDC3 arrestin domain containing 3 0.0260295
VGLL3 vestigial-like family member 3 0.0259529
CCNI cyclin I 0.0258883
BRD2 bromodomain containing 2 0.0258602
SH3RF2 SH3 domain containing ring finger 2 0.0258341
GLS2 glutaminase 2 (liver, mitochondrial) 0.025634
OSMR oncostatin M receptor 0.0255883
DSPP dentin sialophosphoprotein 0.0254531
MYOF myoferlin 0.0251109
UBC ubiquitin C 0.0251063

decreased expression

Symbol Name Standardized Value
LPP LIM domain containing preferred translocation partner in lipoma -0.096784
TPT1 tumor protein, translationally-controlled 1 -0.0924398
SAMD4A sterile alpha motif domain containing 4A -0.0903785
RAI14 retinoic acid induced 14 -0.0772962
FNDC3B fibronectin type III domain containing 3B -0.0715265
LMO7 LIM domain 7 -0.0636367
GOLGB1 golgin B1 -0.0636214
TOP1 topoisomerase (DNA) I -0.0573267
TTC3 tetratricopeptide repeat domain 3 -0.0519306
SQSTM1 sequestosome 1 -0.0511349
RPL37A ribosomal protein L37a -0.0475107
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0471054
IGFBP3 insulin-like growth factor binding protein 3 -0.046349
ARHGEF3 Rho guanine nucleotide exchange factor (GEF) 3 -0.0453384
LIMCH1 LIM and calponin homology domains 1 -0.0450576
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.044864
RPS29 ribosomal protein S29 -0.0448553
EGR1 early growth response 1 -0.0438509
ASPH aspartate beta-hydroxylase -0.0428239
RPS27A ribosomal protein S27a -0.0420313
CSTB cystatin B (stefin B) -0.0415482
RBM47 RNA binding motif protein 47 -0.0411975
GRB10 growth factor receptor-bound protein 10 -0.0404735
PDLIM5 PDZ and LIM domain 5 -0.039936
MAP3K13 mitogen-activated protein kinase kinase kinase 13 -0.0394348
NAV2 neuron navigator 2 -0.0373178
KDM5B lysine (K)-specific demethylase 5B -0.035301
MORF4L2 mortality factor 4 like 2 -0.0346074
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0344749
ARF4 ADP-ribosylation factor 4 -0.0344153
ITCH itchy E3 ubiquitin protein ligase -0.0343159
MSI2 musashi RNA-binding protein 2 -0.0341726
FNBP4 formin binding protein 4 -0.0337289
INTS6 integrator complex subunit 6 -0.033523
FBXO34 F-box protein 34 -0.0334573
CTBP2 C-terminal binding protein 2 -0.0334564
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0332858
ARHGAP5 Rho GTPase activating protein 5 -0.0329302
UPP1 uridine phosphorylase 1 -0.0329059
TMF1 TATA element modulatory factor 1 -0.0328834
WSB1 WD repeat and SOCS box containing 1 -0.0326756
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0324366
RPS3 ribosomal protein S3 -0.0322684
ANTXR2 anthrax toxin receptor 2 -0.0313848
CANX calnexin -0.0309339
SMAD3 SMAD family member 3 -0.0305291
EIF1 eukaryotic translation initiation factor 1 -0.030428
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0296628
RPS12 ribosomal protein S12 -0.0295305
CEP350 centrosomal protein 350kDa -0.0292522
ZNF217 zinc finger protein 217 -0.0287999
BBX bobby sox homolog (Drosophila) -0.0284767
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.0282297
WARS1 tryptophanyl-tRNA synthetase 1 -0.028167
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0281398
HLA-A major histocompatibility complex, class I, A -0.0280669
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0278879
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked -0.0275347
HLA-B major histocompatibility complex, class I, B -0.0271739
TMEM165 transmembrane protein 165 -0.0269323
HECTD1 HECT domain containing E3 ubiquitin protein ligase 1 -0.0268344
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0264249
FAM107B family with sequence similarity 107, member B -0.0262906
PIK3CB phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta -0.0260754
CSNK1A1 casein kinase 1, alpha 1 -0.0259126
FTL ferritin, light polypeptide -0.0255303
RSF1 remodeling and spacing factor 1 -0.0255228
RAB5A RAB5A, member RAS oncogene family -0.0253966
ATOSA atos homolog A -0.0247104
NT5C2 5'-nucleotidase, cytosolic II -0.0245034
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0244882
F3 coagulation factor III (thromboplastin, tissue factor) -0.0243777
TMEM263 transmembrane protein 263 -0.024354
STC2 stanniocalcin 2 -0.0242203
BIRC6 baculoviral IAP repeat containing 6 -0.0242134
PLEC plectin -0.0241602
ANO10 anoctamin 10 -0.0241346
MBOAT2 membrane bound O-acyltransferase domain containing 2 -0.0238675
RPS13 ribosomal protein S13 -0.0238549
PLSCR1 phospholipid scramblase 1 -0.0237147
EXOC4 exocyst complex component 4 -0.023629
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0234506
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.023323
MAML3 mastermind-like 3 (Drosophila) -0.0233146
LRCH3 leucine-rich repeats and calponin homology (CH) domain containing 3 -0.0232952
USP34 ubiquitin specific peptidase 34 -0.0232795
LRRC23 leucine rich repeat containing 23 -0.0231464
CRABP2 cellular retinoic acid binding protein 2 -0.0231356
GLRX glutaredoxin (thioltransferase) -0.0231053
NECTIN4 nectin cell adhesion molecule 4 -0.023095
PDXK pyridoxal (pyridoxine, vitamin B6) kinase -0.0230764
TUT7 terminal uridylyl transferase 7 -0.0230629
MCL1 myeloid cell leukemia 1 -0.0229724
EPRS1 glutamyl-prolyl-tRNA synthetase 1 -0.022917
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0228935
MON2 MON2 homolog (S. cerevisiae) -0.0228013
FBXW11 F-box and WD repeat domain containing 11 -0.02275
KDM2A lysine (K)-specific demethylase 2A -0.02267
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0224713
FAM177A1 family with sequence similarity 177, member A1 -0.0224341