APTO-253_PANC-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description APTO-253 perturbation in PANC-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the APTO-253_PANC-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VCL vinculin 0.113181
CENPF centromere protein F, 350/400kDa 0.0623819
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0494349
TOP2A topoisomerase (DNA) II alpha 170kDa 0.045722
ZFP36 ZFP36 ring finger protein 0.0427759
MKI67 marker of proliferation Ki-67 0.0419328
PLEKHG2 pleckstrin homology domain containing, family G (with RhoGef domain) member 2 0.040395
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0374587
EGR1 early growth response 1 0.0364214
GARS1 glycyl-tRNA synthetase 1 0.0338293
FBL fibrillarin 0.0312069
ENO1 enolase 1, (alpha) 0.0303305
VMP1 vacuole membrane protein 1 0.0269282
ELL2 elongation factor, RNA polymerase II, 2 0.0255636
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0250599
MAP1B microtubule-associated protein 1B 0.024357
SAMD4B sterile alpha motif domain containing 4B 0.0243313
WEE1 WEE1 G2 checkpoint kinase 0.0240977
PFN1 profilin 1 0.0240006
SESN2 sestrin 2 0.0239947
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.022274
FHL2 four and a half LIM domains 2 0.0219936
LOC102724023 ES1 protein homolog, mitochondrial 0.0217387
MAP3K20 mitogen-activated protein kinase kinase kinase 20 0.0216634
GOLT1A golgi transport 1A 0.0199106
RPL3 ribosomal protein L3 0.0195558
KTN1 kinectin 1 (kinesin receptor) 0.0195274
FOSL1 FOS-like antigen 1 0.0193494
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0188123
RPL21 ribosomal protein L21 0.018176
ZSWIM6 zinc finger, SWIM-type containing 6 0.0178578
ATF6 activating transcription factor 6 0.017599
SMC1A structural maintenance of chromosomes 1A 0.0170305
CBX3 chromobox homolog 3 0.0164904
RNASE1 ribonuclease, RNase A family, 1 (pancreatic) 0.016417
SRRM2 serine/arginine repetitive matrix 2 0.0161522
KPNB1 karyopherin (importin) beta 1 0.0158766
PAF1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae) 0.0156891
BIRC2 baculoviral IAP repeat containing 2 0.0154189
SMC4 structural maintenance of chromosomes 4 0.0153677
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0153264
MYADM myeloid-associated differentiation marker 0.0147098
EIF3K eukaryotic translation initiation factor 3, subunit K 0.0142198
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0141439
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0140985
TUBA1B tubulin, alpha 1b 0.0140704
RPS2 ribosomal protein S2 0.0140421
TIMM50 translocase of inner mitochondrial membrane 50 homolog (S. cerevisiae) 0.01392
DSTN destrin (actin depolymerizing factor) 0.0137482
HMMR hyaluronan-mediated motility receptor (RHAMM) 0.0136516
KLF6 Kruppel-like factor 6 0.013558
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0133233
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0132898
HDGF hepatoma-derived growth factor 0.0131732
MYPN myopalladin 0.0131513
CKAP2 cytoskeleton associated protein 2 0.0130996
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0130558
SUPT16H suppressor of Ty 16 homolog (S. cerevisiae) 0.0129156
KIF4A kinesin family member 4A 0.0129003
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase 0.0125208
SERBP1 SERPINE1 mRNA binding protein 1 0.0124768
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0122549
TGOLN2 trans-golgi network protein 2 0.0119596
PDLIM5 PDZ and LIM domain 5 0.0118362
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0117626
ARHGAP29 Rho GTPase activating protein 29 0.0117579
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.011756
TPX2 TPX2, microtubule-associated 0.0117093
SRSF4 serine/arginine-rich splicing factor 4 0.0117071
NACA nascent polypeptide-associated complex alpha subunit 0.0116257
KAT6B K(lysine) acetyltransferase 6B 0.0114385
POTEF POTE ankyrin domain family, member F 0.0113213
YBX3 Y box binding protein 3 0.0111377
LRP11 low density lipoprotein receptor-related protein 11 0.0111351
DEK DEK proto-oncogene 0.0110883
HSPE1 heat shock 10kDa protein 1 0.011035
FLOT1 flotillin 1 0.0110133
ASNS asparagine synthetase (glutamine-hydrolyzing) 0.0109257
RPL32 ribosomal protein L32 0.0109116
DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 0.0106961
PRR13 proline rich 13 0.0105643
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 0.0103709
TXNRD1 thioredoxin reductase 1 0.0103073
RPL7 ribosomal protein L7 0.0102119
PA2G4 proliferation-associated 2G4, 38kDa 0.010195
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0101506
IL6ST interleukin 6 signal transducer 0.0101462
RAD23A RAD23 homolog A (S. cerevisiae) 0.0100763
ATF3 activating transcription factor 3 0.0100537
EIF5B eukaryotic translation initiation factor 5B 0.0100347
EEF2 eukaryotic translation elongation factor 2 0.0100289
STMN1 stathmin 1 0.0100206
NCOA7 nuclear receptor coactivator 7 0.0100093
MRTFA myocardin related transcription factor A 0.00991898
DNAJC8 DnaJ (Hsp40) homolog, subfamily C, member 8 0.00990054
SET SET nuclear proto-oncogene 0.00981801
FAU Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed 0.0098051
PSAT1 phosphoserine aminotransferase 1 0.00978525
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.00975859
CCT2 chaperonin containing TCP1, subunit 2 (beta) 0.00960318

decreased expression

Symbol Name Standardized Value
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.1861
AHNAK AHNAK nucleoprotein -0.18578
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.185215
VIM vimentin -0.18437
TRIO trio Rho guanine nucleotide exchange factor -0.165118
THSD4 thrombospondin, type I, domain containing 4 -0.146089
SMAD3 SMAD family member 3 -0.101268
FMNL2 formin-like 2 -0.09315
FNDC3B fibronectin type III domain containing 3B -0.0909545
MACF1 microtubule-actin crosslinking factor 1 -0.087148
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0858439
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0808517
MYOF myoferlin -0.0799472
HMGA2 high mobility group AT-hook 2 -0.076252
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0760873
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1 -0.0758948
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0754834
SEPTIN9 septin 9 -0.0739867
RPS16 ribosomal protein S16 -0.0720095
SLC35F3 solute carrier family 35, member F3 -0.0707225
NAV2 neuron navigator 2 -0.0699057
DST dystonin -0.0689498
SPAG9 sperm associated antigen 9 -0.0669361
PTK2 protein tyrosine kinase 2 -0.063066
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 -0.0558097
PDE10A phosphodiesterase 10A -0.0555082
NHSL1 NHS-like 1 -0.0536584
OGA O-GlcNAcase -0.052111
ATG7 autophagy related 7 -0.0511504
CTBP2 C-terminal binding protein 2 -0.0510161
HSPG2 heparan sulfate proteoglycan 2 -0.0505824
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0495787
ZCCHC7 zinc finger, CCHC domain containing 7 -0.049288
ASPH aspartate beta-hydroxylase -0.048027
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0477662
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) -0.0474176
ACTN4 actinin, alpha 4 -0.0468111
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.046412
AFAP1 actin filament associated protein 1 -0.0461673
APLP2 amyloid beta (A4) precursor-like protein 2 -0.0451808
ZEB1 zinc finger E-box binding homeobox 1 -0.0442351
MAML3 mastermind-like 3 (Drosophila) -0.0441473
TM4SF1 transmembrane 4 L six family member 1 -0.044114
IGF1R insulin-like growth factor 1 receptor -0.0430842
TNS3 tensin 3 -0.0422153
NF1 neurofibromin 1 -0.0420014
ICAM1 intercellular adhesion molecule 1 -0.0410055
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) -0.0399802
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0397789
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.039758
CMIP c-Maf inducing protein -0.0386484
CANX calnexin -0.0380833
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) -0.0375616
ANKRD11 ankyrin repeat domain 11 -0.0375543
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0372766
NPAS2 neuronal PAS domain protein 2 -0.0371834
HNRNPL heterogeneous nuclear ribonucleoprotein L -0.0367409
TPT1 tumor protein, translationally-controlled 1 -0.0367403
SDK1 sidekick cell adhesion molecule 1 -0.0366672
EFNA5 ephrin-A5 -0.0362871
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0362705
MORF4L2 mortality factor 4 like 2 -0.0362176
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3 -0.0361184
AFDN afadin, adherens junction formation factor -0.0359742
APP amyloid beta (A4) precursor protein -0.035873
EXT1 exostosin glycosyltransferase 1 -0.0357086
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0355625
EGFR epidermal growth factor receptor -0.0344735
WSB1 WD repeat and SOCS box containing 1 -0.0332642
NAP1L1 nucleosome assembly protein 1-like 1 -0.0329728
LPP LIM domain containing preferred translocation partner in lipoma -0.0327454
SDCCAG8 serologically defined colon cancer antigen 8 -0.0323233
SBF2 SET binding factor 2 -0.032159
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0319021
ACTG1 actin gamma 1 -0.0318877
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0313898
MYO10 myosin X -0.0313358
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase -0.0312834
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0307698
SNX14 sorting nexin 14 -0.030491
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0304326
PRSS23 protease, serine, 23 -0.0303813
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.030179
MARCHF6 membrane associated ring-CH-type finger 6 -0.0297795
HIPK2 homeodomain interacting protein kinase 2 -0.0297262
RASA3 RAS p21 protein activator 3 -0.029601
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0294637
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.029068
CSNK1A1 casein kinase 1, alpha 1 -0.0290346
ATM ATM serine/threonine kinase -0.0285469
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0281464
PTPRJ protein tyrosine phosphatase, receptor type, J -0.0281422
BIRC6 baculoviral IAP repeat containing 6 -0.0278936
RPL11 ribosomal protein L11 -0.0277674
ZMYND8 zinc finger, MYND-type containing 8 -0.0277482
COL18A1 collagen, type XVIII, alpha 1 -0.0276928
CAVIN1 caveolae associated protein 1 -0.0276135
HMGA1 high mobility group AT-hook 1 -0.0271371
RPL37A ribosomal protein L37a -0.0271311
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.0270284