ARID3A Gene Set

Dataset CM4AI KOLF21J CRISPRi Gene Perturbation Atlas
Category transcriptomics
Type gene perturbation
Description AT rich interactive domain 3A (BRIGHT-like)|This gene encodes a member of the ARID (AT-rich interaction domain) family of DNA binding proteins. It was found by homology to the Drosophila dead ringer gene, which is important for normal embryogenesis. Other ARID family members have roles in embryonic patterning, cell lineage gene regulation, cell cycle control, transcriptional regulation, and possibly in chromatin structure modification. [provided by RefSeq, Jul 2008] (NCBI Entrez Gene Database, 1820)
Similar Terms
Downloads & Tools

Genes

342 genes differentially expressed following the ARID3A gene perturbation from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas.

increased expression

Symbol Name Standardized Value
APLN apelin 3.4476
APOC2 apolipoprotein C-II 3.4476
DENND6B DENN/MADD domain containing 6B 3.4476
IL2RB interleukin 2 receptor, beta 3.4476
STMND1 stathmin domain containing 1 3.4476
TBC1D28 TBC1 domain family, member 28 3.4476
ERVFRD-1 endogenous retrovirus group FRD, member 1 3.4476
TTLL8 tubulin tyrosine ligase-like family member 8 3.4476
RLN1 relaxin 1 3.4476
EMP1 epithelial membrane protein 1 3.4476
RORC RAR-related orphan receptor C 3.4476
SPATA3 spermatogenesis associated 3 3.4476
UPK3A uroplakin 3A 3.4476
BIRC3 baculoviral IAP repeat containing 3 3.4476
ADAM2 ADAM metallopeptidase domain 2 3.4476
FGD2 FYVE, RhoGEF and PH domain containing 2 3.4476
RNF112 ring finger protein 112 3.4476
NIM1K NIM1 serine/threonine protein kinase 3.4476
NMUR2 neuromedin U receptor 2 3.4476
CCDC152 coiled-coil domain containing 152 3.4476
ADAM29 ADAM metallopeptidase domain 29 3.4476
MMP19 matrix metallopeptidase 19 3.4476
GPR149 G protein-coupled receptor 149 3.4476
GPR179 G protein-coupled receptor 179 3.4476
H3-7 H3.7 histone (putative) 3.4476
AMPD1 adenosine monophosphate deaminase 1 3.4476
TMEM31 transmembrane protein 31 3.4476
TMEM238L transmembrane protein 238 like 3.4476
SLC10A6 solute carrier family 10 (sodium/bile acid cotransporter), member 6 3.4476
GSTT4 glutathione S-transferase theta 4 3.33191
CYP4A22 cytochrome P450, family 4, subfamily A, polypeptide 22 3.33191
PSD2 pleckstrin and Sec7 domain containing 2 3.33191
C11ORF87 chromosome 11 open reading frame 87 3.33191
TKTL2 transketolase-like 2 3.33191
SSTR5 somatostatin receptor 5 3.33191
RPE65 retinal pigment epithelium-specific protein 65kDa 3.33191
MUC5B mucin 5B, oligomeric mucus/gel-forming 3.33191
PPDPFL pancreatic progenitor cell differentiation and proliferation factor like 3.33191
OR2J2 olfactory receptor, family 2, subfamily J, member 2 3.33191
CRYGA crystallin, gamma A 3.33191
GARIN4 golgi associated RAB2 interactor family member 4 3.33191
PTGFR prostaglandin F receptor (FP) 3.33191
TNFSF4 tumor necrosis factor (ligand) superfamily, member 4 3.33191
CPHXL cytoplasmic polyadenylated homeobox like 3.33191
TDO2 tryptophan 2,3-dioxygenase 3.33191
OOSP2 oocyte secreted protein 2 3.33191
FAM216B family with sequence similarity 216, member B 3.33191
B3GNT3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 3.33191
FGF6 fibroblast growth factor 6 3.33191
S100A1 S100 calcium binding protein A1 3.33191
METTL21C methyltransferase like 21C 3.33191
G6PC2 glucose-6-phosphatase, catalytic, 2 3.33191
TNS4 tensin 4 3.33191
C9ORF152 chromosome 9 open reading frame 152 3.33191
ASGR2 asialoglycoprotein receptor 2 3.33191
CCDC197 coiled-coil domain containing 197 3.33191
ZC2HC1B zinc finger, C2HC-type containing 1B 3.33191
IL18R1 interleukin 18 receptor 1 3.33191
TLE7 TLE family member 7 3.33191
IL4 interleukin 4 3.33191
ULBP1 UL16 binding protein 1 3.33191
NR1I3 nuclear receptor subfamily 1, group I, member 3 3.33191
RNF227 ring finger protein 227 3.33191
LDHAL6B lactate dehydrogenase A-like 6B 3.33191
C3ORF80 chromosome 3 open reading frame 80 3.33191
DAO D-amino-acid oxidase 3.33191
CABP4 calcium binding protein 4 3.33191
STAM signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 3.33191
SLAMF7 SLAM family member 7 3.33191
LRRC3C leucine rich repeat containing 3C 3.33191
HAO2 hydroxyacid oxidase 2 (long chain) 3.33191
PLG plasminogen 3.33191
H1-6 H1.6 linker histone, cluster member 3.33191
TMPRSS7 transmembrane protease, serine 7 3.33191
LY6H lymphocyte antigen 6 complex, locus H 3.33191
TBX10 T-box 10 3.33191
PARVG parvin, gamma 3.33191
GUCY1A1 guanylate cyclase 1 soluble subunit alpha 1 3.33191
GPR132 G protein-coupled receptor 132 3.33191
CGB3 chorionic gonadotropin subunit beta 3 3.33191
PTPRH protein tyrosine phosphatase, receptor type, H 3.33191
GARIN1A golgi associated RAB2 interactor 1A 3.33191
ENPP7 ectonucleotide pyrophosphatase/phosphodiesterase 7 3.33191
LRRD1 leucine-rich repeats and death domain containing 1 3.33191
ASB15 ankyrin repeat and SOCS box containing 15 3.33191
USP26 ubiquitin specific peptidase 26 3.33191
VWA5B2 von Willebrand factor A domain containing 5B2 3.33191
MAGEA3 melanoma antigen family A3 3.33191
MUC6 mucin 6, oligomeric mucus/gel-forming 3.33191
SPDYE4 speedy/RINGO cell cycle regulator family member E4 3.33191
COX4I1 cytochrome c oxidase subunit IV isoform 1 3.33191
PLVAP plasmalemma vesicle associated protein 3.33191
HYI hydroxypyruvate isomerase (putative) 3.33191
RAB44 RAB44, member RAS oncogene family 3.33191
ACTL10 actin-like 10 3.33191
CCER2 coiled-coil glutamate-rich protein 2 3.33191
ATP13A4 ATPase type 13A4 3.33191
OR2A25 olfactory receptor, family 2, subfamily A, member 25 3.33191
TBX20 T-box 20 3.33191
PDILT protein disulfide isomerase-like, testis expressed 3.33191
NTRK1 neurotrophic tyrosine kinase, receptor, type 1 3.33191
SLC25A41 solute carrier family 25, member 41 3.33191
OR14A2 olfactory receptor, family 14, subfamily A, member 2 3.33191
STAB1 stabilin 1 3.33191
DUOX2 dual oxidase 2 3.33191
ERICH6B glutamate-rich 6B 3.33191
ADAM7 ADAM metallopeptidase domain 7 3.33191
SULT2A1 sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1 3.33191
AKNAD1 AKNA domain containing 1 3.33191
SLC6A13 solute carrier family 6 (neurotransmitter transporter), member 13 3.33191
CDH19 cadherin 19, type 2 3.33191
ODF1 outer dense fiber of sperm tails 1 3.33191
SPATA31E1 SPATA31 subfamily E, member 1 3.33191
CRYBB2 crystallin, beta B2 3.33191
POF1B premature ovarian failure, 1B 3.33191
TP53AIP1 tumor protein p53 regulated apoptosis inducing protein 1 3.33191
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) 3.33191
CFH complement factor H 3.33191
SPMIP10 sperm microtubule inner protein 10 3.33191
OR56A3 olfactory receptor, family 56, subfamily A, member 3 3.33191
C18ORF63 chromosome 18 open reading frame 63 3.33191
NXNL1 nucleoredoxin-like 1 3.33191
CSTA cystatin A (stefin A) 3.33191
DRD5 dopamine receptor D5 3.33191
FOXE1 forkhead box E1 3.33191
GSTA3 glutathione S-transferase alpha 3 3.33191
IDI2 isopentenyl-diphosphate delta isomerase 2 3.33191
PLCD4 phospholipase C, delta 4 3.33191
NYX nyctalopin 3.33191
OR9H1 olfactory receptor family 9 subfamily H member 1 pseudogene (gene/pseudogene) 3.33191
OPALIN oligodendrocytic myelin paranodal and inner loop protein 3.33191
TTC24 tetratricopeptide repeat domain 24 3.33191
ZNF831 zinc finger protein 831 3.33191
NT5DC4 5'-nucleotidase domain containing 4 3.33191
AMN amnion associated transmembrane protein 3.33191
TF transferrin 3.33191
OR52K1 olfactory receptor, family 52, subfamily K, member 1 3.33191
SPMAP2L sperm microtubule associated protein 2 like 3.33191
PLA1A phospholipase A1 member A 3.33191
SAMD7 sterile alpha motif domain containing 7 3.33191
TBX1 T-box 1 3.33191
AICDA activation-induced cytidine deaminase 3.33191
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61) 3.33191
CRYBA1 crystallin, beta A1 3.33191
DMRTB1 DMRT-like family B with proline-rich C-terminal, 1 3.33191
CIMIP4 ciliary microtubule inner protein 4 3.33191
REELD1 reeler domain containing 1 3.33191
NUTM2B NUT family member 2B 3.33191
FOLR3 folate receptor 3 (gamma) 3.33191
SPEGNB SPEG neighbor 3.33191
HEMGN hemogen 3.33191
CD80 CD80 molecule 3.33191
HSD11B1 hydroxysteroid (11-beta) dehydrogenase 1 3.33191
CETP cholesteryl ester transfer protein, plasma 3.33191
CSF3R colony stimulating factor 3 receptor (granulocyte) 3.33191
LRRC74B leucine rich repeat containing 74B 3.33191
CYP2C19 cytochrome P450, family 2, subfamily C, polypeptide 19 3.33191
SLC28A3 solute carrier family 28 (concentrative nucleoside transporter), member 3 3.33191
MAEL maelstrom spermatogenic transposon silencer 3.33191
SULT1C3 sulfotransferase family, cytosolic, 1C, member 3 3.33191
SPNS3 spinster homolog 3 (Drosophila) 3.33191
PMP2 peripheral myelin protein 2 3.33191
IL17F interleukin 17F 3.33191
GCSAML germinal center-associated, signaling and motility-like 3.33191
PF4V1 platelet factor 4 variant 1 3.33191
PHOSPHO1 phosphatase, orphan 1 3.33191
OR3A1 olfactory receptor, family 3, subfamily A, member 1 3.33191
PLA2G4E phospholipase A2, group IVE 3.33191
GREM1 gremlin 1, DAN family BMP antagonist 3.33191
ERLN endoregulin 3.33191
PRRT1B proline rich transmembrane protein 1B 3.33191
PRKD2 protein kinase D2 3.25489
GPR87 G protein-coupled receptor 87 3.24347
PNLDC1 poly(A)-specific ribonuclease (PARN)-like domain containing 1 3.24347
GRPEL1 GrpE-like 1, mitochondrial (E. coli) 3.10746
NEK9 NIMA-related kinase 9 3.07936
PRODH proline dehydrogenase (oxidase) 1 3.06734
DNAJC14 DnaJ (Hsp40) homolog, subfamily C, member 14 2.94045
INTS10 integrator complex subunit 10 2.89104
ZNF385A zinc finger protein 385A 2.86654
STUM stum, mechanosensory transduction mediator homolog 2.82136
PLSCR4 phospholipid scramblase 4 2.77544
GPR183 G protein-coupled receptor 183 2.62868
ENG endoglin 2.5794
RHD Rh blood group, D antigen 2.53827
BDH1 3-hydroxybutyrate dehydrogenase, type 1 2.53313
PLP1 proteolipid protein 1 2.51577
KDM2B lysine (K)-specific demethylase 2B 2.51332
LIG4 ligase IV, DNA, ATP-dependent 2.51315
MEIS3 Meis homeobox 3 2.49302
THAP11 THAP domain containing 11 2.48253
KTN1 kinectin 1 (kinesin receptor) 2.46271
CATSPERD catsper channel auxiliary subunit delta 2.43083
NIPSNAP3B nipsnap homolog 3B (C. elegans) 2.39952
CRACDL CRACD like 2.39131
DOK7 docking protein 7 2.39131
LOX lysyl oxidase 2.39131
CHRNA4 cholinergic receptor, nicotinic, alpha 4 (neuronal) 2.38318
VSTM4 V-set and transmembrane domain containing 4 2.38318
RASL11A RAS-like, family 11, member A 2.37421
SLC39A14 solute carrier family 39 (zinc transporter), member 14 2.33253
PCIF1 PDX1 C-terminal inhibiting factor 1 2.32309
SEC11C SEC11 homolog C (S. cerevisiae) 2.31594
FUNDC1 FUN14 domain containing 1 2.28626
ZFP62 ZFP62 zinc finger protein 2.27946
C10ORF105 chromosome 10 open reading frame 105 2.26541
TRIM11 tripartite motif containing 11 2.25886
RFLNB refilin B 2.25702
PDYN prodynorphin 2.25632
ALOX12B arachidonate 12-lipoxygenase, 12R type 2.25015
SNX19 sorting nexin 19 2.24748
RNPC3 RNA-binding region (RNP1, RRM) containing 3 2.24558
HPGD hydroxyprostaglandin dehydrogenase 15-(NAD) 2.24423
MEIS1 Meis homeobox 1 2.24423
HSPB2 heat shock 27kDa protein 2 2.24423
MEIOB meiosis specific with OB domains 2.24423
RSPH1 radial spoke head 1 homolog (Chlamydomonas) 2.24423
YAE1 YAE1 maturation factor of ABCE1 2.2351
PIP4P2 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 2.21472
DNAJB5 DnaJ (Hsp40) homolog, subfamily B, member 5 2.21219
PDZRN3 PDZ domain containing ring finger 3 2.20121
PITPNA phosphatidylinositol transfer protein, alpha 2.19489
LRRC47 leucine rich repeat containing 47 2.16062
TMEM170A transmembrane protein 170A 2.15699
AKAP19 A-kinase anchoring protein 19 2.1392
SLC25A12 solute carrier family 25 (aspartate/glutamate carrier), member 12 2.12169
MRM1 mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae) 2.12043
MRPL34 mitochondrial ribosomal protein L34 2.10304
PA2G4 proliferation-associated 2G4, 38kDa 2.10304
EVC Ellis van Creveld protein 2.09978
ELF2 E74-like factor 2 (ets domain transcription factor) 2.09683
UQCRH ubiquinol-cytochrome c reductase hinge protein 2.08357
LIPA lipase A, lysosomal acid, cholesterol esterase 2.08357
RPL35A ribosomal protein L35a 2.0187
ADRA1D adrenoceptor alpha 1D 2.01535
TFB1M transcription factor B1, mitochondrial 2.01476
MNAT1 MNAT CDK-activating kinase assembly factor 1 2.001

decreased expression

Symbol Name Standardized Value
RAD21L1 RAD21-like 1 (S. pombe) -3.4476
CLCN1 chloride channel, voltage-sensitive 1 -3.4476
ZNF221 zinc finger protein 221 -3.4476
BTBD19 BTB (POZ) domain containing 19 -3.4476
PDF peptide deformylase (mitochondrial) -3.4476
MAMDC4 MAM domain containing 4 -3.33191
ZBTB47 zinc finger and BTB domain containing 47 -3.33191
PRB2 proline-rich protein BstNI subfamily 2 -3.33191
FCGR2A Fc fragment of IgG, low affinity IIa, receptor (CD32) -3.33191
FIBIN fin bud initiation factor homolog (zebrafish) -3.33191
COX7B2 cytochrome c oxidase subunit VIIb2 -3.33191
LRRC36 leucine rich repeat containing 36 -3.33191
NLRC3 NLR family, CARD domain containing 3 -3.33191
SLC25A45 solute carrier family 25, member 45 -3.33191
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -3.33191
TMEM217 transmembrane protein 217 -3.33191
DPPA3 developmental pluripotency associated 3 -3.33191
GPRASP3 G protein-coupled receptor associated sorting protein family member 3 -3.33191
CHRNA10 cholinergic receptor, nicotinic, alpha 10 (neuronal) -3.33191
ADIRF adipogenesis regulatory factor -3.33191
OR2F1 olfactory receptor, family 2, subfamily F, member 1 (gene/pseudogene) -3.33191
LIX1 Lix1 homolog (chicken) -3.33191
PRH1-TAS2R14 PRH1-TAS2R14 readthrough -3.33191
THSD8 thrombospondin type 1 domain containing 8 -3.33191
OTP orthopedia homeobox -3.33191
ACP7 acid phosphatase 7, tartrate resistant (putative) -3.33191
RAG1 recombination activating gene 1 -3.33191
OPRM1 opioid receptor, mu 1 -3.33191
CTSF cathepsin F -3.33191
B4GALNT1 beta-1,4-N-acetyl-galactosaminyl transferase 1 -3.33191
MORN5 MORN repeat containing 5 -3.33191
ACSBG2 acyl-CoA synthetase bubblegum family member 2 -3.33191
EXOC3L1 exocyst complex component 3-like 1 -3.33191
TRPA1 transient receptor potential cation channel, subfamily A, member 1 -3.33191
TTR transthyretin -3.33191
SLC52A1 solute carrier family 52 (riboflavin transporter), member 1 -3.33191
IGSF23 immunoglobulin superfamily, member 23 -3.33191
ADGRG1 adhesion G protein-coupled receptor G1 -3.33191
ZFP28 ZFP28 zinc finger protein -3.26002
TMPRSS9 transmembrane protease, serine 9 -3.25489
ARID3A AT rich interactive domain 3A (BRIGHT-like) -3.13048
SLC4A10 solute carrier family 4, sodium bicarbonate transporter, member 10 -3.09263
TRAF5 TNF receptor-associated factor 5 -3.02723
MRPL48 mitochondrial ribosomal protein L48 -3.01588
IL6ST-DT IL6ST divergent transcript -2.85485
ITGB4 integrin, beta 4 -2.85049
CYTH3 cytohesin 3 -2.80415
SLC1A2 solute carrier family 1 (glial high affinity glutamate transporter), member 2 -2.79882
PTH2R parathyroid hormone 2 receptor -2.53849
SLC31A2 solute carrier family 31 (copper transporter), member 2 -2.51606
TACSTD2 tumor-associated calcium signal transducer 2 -2.51606
CDCA5 cell division cycle associated 5 -2.5036
CRISPLD2 cysteine-rich secretory protein LCCL domain containing 2 -2.49302
ZDHHC24 zinc finger, DHHC-type containing 24 -2.483
WDR59 WD repeat domain 59 -2.4733
UNC5C unc-5 homolog C (C. elegans) -2.44077
RHOV ras homolog family member V -2.37808
DBN1 drebrin 1 -2.3536
NCK1 NCK adaptor protein 1 -2.3343
CDK17 cyclin-dependent kinase 17 -2.3343
HTRA1 HtrA serine peptidase 1 -2.3342
XKRX XK, Kell blood group complex subunit-related, X-linked -2.31148
TGM1 transglutaminase 1 -2.31148
CUX1 cut-like homeobox 1 -2.30129
GREB1L growth regulation by estrogen in breast cancer-like -2.28694
MTUS1 microtubule associated tumor suppressor 1 -2.2864
NSRP1 nuclear speckle splicing regulatory protein 1 -2.28322
TRABD2A TraB domain containing 2A -2.28302
NRIP1 nuclear receptor interacting protein 1 -2.27946
ACTG2 actin, gamma 2, smooth muscle, enteric -2.27338
GPR3 G protein-coupled receptor 3 -2.25632
KLHL15 kelch-like family member 15 -2.25261
DRC11 dynein regulatory complex subunit 11 -2.25081
SNX11 sorting nexin 11 -2.25081
CCDC9 coiled-coil domain containing 9 -2.24423
SPTAN1 spectrin, alpha, non-erythrocytic 1 -2.24423
APOLTP apolipoprotein lipid transfer particle homolog -2.24423
WRAP73 WD repeat containing, antisense to TP73 -2.24423
NAP1L1 nucleosome assembly protein 1-like 1 -2.24423
RTL6 retrotransposon Gag like 6 -2.24166
DOCK3 dedicator of cytokinesis 3 -2.23991
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -2.23991
SPATC1L spermatogenesis and centriole associated 1-like -2.23991
GPX2 glutathione peroxidase 2 -2.22963
HMGCLL1 3-hydroxymethyl-3-methylglutaryl-CoA lyase-like 1 -2.22963
ANKLE1 ankyrin repeat and LEM domain containing 1 -2.21805
ZNF232 zinc finger protein 232 -2.20464
IRF3 interferon regulatory factor 3 -2.16644
C6ORF62 chromosome 6 open reading frame 62 -2.16644
MYT1 myelin transcription factor 1 -2.12169
ZNF606 zinc finger protein 606 -2.11284
CMTM6 CKLF-like MARVEL transmembrane domain containing 6 -2.08719
SESN1 sestrin 1 -2.08357
GPX3 glutathione peroxidase 3 -2.08204
ADCY6 adenylate cyclase 6 -2.06805
RSPO2 R-spondin 2 -2.06805
TC2N tandem C2 domains, nuclear -2.04642
TRMT112 tRNA methyltransferase 11-2 homolog (S. cerevisiae) -2.03994
RBM10 RNA binding motif protein 10 -2.03731
MRFAP1L1 Morf4 family associated protein 1-like 1 -2.03177
NDNF neuron-derived neurotrophic factor -2.02263
UTP6 UTP6, small subunit (SSU) processome component, homolog (yeast) -2.02139
TFCP2 transcription factor CP2 -2.01348
GTF3C4 general transcription factor IIIC, polypeptide 4, 90kDa -2.01348
COG3 component of oligomeric golgi complex 3 -2.00686