ARID3B Gene Set

Dataset CM4AI KOLF21J CRISPRi Gene Perturbation Atlas
Category transcriptomics
Type gene perturbation
Description AT rich interactive domain 3B (BRIGHT-like)|This gene encodes a member of the ARID (AT-rich interaction domain) family of DNA-binding proteins. The encoded protein is homologous with two proteins that bind to the retinoblastoma gene product, and also with the mouse Bright and Drosophila dead ringer proteins. A pseudogene on chromosome 1p31 exists for this gene. Members of the ARID family have roles in embryonic patterning, cell lineage gene regulation, cell cycle control, transcriptional regulation and possibly in chromatin structure modification. [provided by RefSeq, Jul 2008] (NCBI Entrez Gene Database, 10620)
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Genes

336 genes differentially expressed following the ARID3B gene perturbation from the CM4AI KOLF21J CRISPRi Gene Perturbation Atlas.

increased expression

Symbol Name Standardized Value
HRH1 histamine receptor H1 3.11085
TSGA13 testis specific, 13 3.11085
ZNF467 zinc finger protein 467 3.11085
HES5 hes family bHLH transcription factor 5 3.11085
UNC13D unc-13 homolog D (C. elegans) 3.11085
NCF1 neutrophil cytosolic factor 1 3.11085
UPB1 ureidopropionase, beta 3.11085
DRICH1 aspartate-rich 1 3.11085
CLEC19A C-type lectin domain family 19, member A 3.11085
NRAP nebulin-related anchoring protein 3.11085
OR2AG1 olfactory receptor, family 2, subfamily AG, member 1 (gene/pseudogene) 3.11085
CD209 CD209 molecule 3.11085
CYP2E1 cytochrome P450, family 2, subfamily E, polypeptide 1 3.11085
RSPH6A radial spoke head 6 homolog A (Chlamydomonas) 3.11085
CD6 CD6 molecule 3.11085
LILRA2 leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2 3.11085
DNAJC5B DnaJ (Hsp40) homolog, subfamily C, member 5 beta 3.11085
MAP3K7CL MAP3K7 C-terminal like 3.11085
ROBO4 roundabout, axon guidance receptor, homolog 4 (Drosophila) 3.11085
ADGRE1 adhesion G protein-coupled receptor E1 3.11085
IGFL4 IGF-like family member 4 3.11085
IGFL2 IGF-like family member 2 3.11085
ASPDH aspartate dehydrogenase domain containing 3.11085
PLIN1 perilipin 1 3.11085
CDKN2B cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4) 3.11085
KCNJ5 potassium channel, inwardly rectifying subfamily J, member 5 3.11085
DSG3 desmoglein 3 3.11085
MUC1 mucin 1, cell surface associated 3.11085
LCN15 lipocalin 15 3.11085
CRX cone-rod homeobox 3.11085
TTLL2 tubulin tyrosine ligase-like family member 2 3.11085
LRRIQ4 leucine-rich repeats and IQ motif containing 4 3.11085
NPIPA3 nuclear pore complex interacting protein family, member A3 3.11085
WNT8A wingless-type MMTV integration site family, member 8A 3.11085
LRRC61 leucine rich repeat containing 61 3.11085
MUC20 mucin 20, cell surface associated 3.11085
ZAP70 zeta-chain (TCR) associated protein kinase 70kDa 3.11085
C9ORF152 chromosome 9 open reading frame 152 3.11085
C1ORF146 chromosome 1 open reading frame 146 3.11085
GNAT3 guanine nucleotide binding protein, alpha transducing 3 3.11085
PAX8 paired box 8 3.11085
ADH1A alcohol dehydrogenase 1A (class I), alpha polypeptide 3.11085
NUGGC nuclear GTPase, germinal center associated 3.11085
ARSF arylsulfatase F 3.11085
SLC39A2 solute carrier family 39 (zinc transporter), member 2 3.11085
C11ORF87 chromosome 11 open reading frame 87 3.11085
TRPV3 transient receptor potential cation channel, subfamily V, member 3 3.11085
TRPV5 transient receptor potential cation channel, subfamily V, member 5 3.11085
OXTR oxytocin receptor 3.11085
ABCG5 ATP-binding cassette, sub-family G (WHITE), member 5 3.11085
HMX3 H6 family homeobox 3 3.11085
SRL sarcalumenin 3.11085
DRC5 dynein regulatory complex subunit 5 3.11085
IRAG2 inositol 1,4,5-triphosphate receptor associated 2 3.11085
CES4A carboxylesterase 4A 3.11085
ALDOB aldolase B, fructose-bisphosphate 3.11085
AVPR1A arginine vasopressin receptor 1A 3.11085
SCEL sciellin 3.11085
PLN phospholamban 3.11085
SPRR2A small proline-rich protein 2A 3.11085
FMO3 flavin containing monooxygenase 3 3.11085
PKD2L1 polycystic kidney disease 2-like 1 3.11085
SLC2A2 solute carrier family 2 (facilitated glucose transporter), member 2 3.11085
RTL9 retrotransposon Gag like 9 3.11085
CALHM5 calcium homeostasis modulator family member 5 3.11085
TAFA3 TAFA chemokine like family member 3 3.11085
ZC3H11C zinc finger CCCH-type containing 11C 3.11085
LINC02268 long intergenic non-protein coding RNA 2268 3.11085
DEFB109B defensin beta 109B 3.11085
LOC124902436 talanin 3.11085
ACP7 acid phosphatase 7, tartrate resistant (putative) 3.11085
SMIM31 small integral membrane protein 31 3.11085
TMEM272 transmembrane protein 272 3.11085
CFAP276 cilia and flagella associated protein 276 3.11085
SEPTIN12 septin 12 3.11085
MPIG6B megakaryocyte and platelet inhibitory receptor G6b 3.11085
CYP2C9 cytochrome P450, family 2, subfamily C, polypeptide 9 3.11085
ABCC11 ATP-binding cassette, sub-family C (CFTR/MRP), member 11 3.11085
XKR3 XK, Kell blood group complex subunit-related family, member 3 3.11085
S1PR1 sphingosine-1-phosphate receptor 1 3.11085
OR2AT4 olfactory receptor, family 2, subfamily AT, member 4 3.11085
VSX2 visual system homeobox 2 3.11085
NXPE1 neurexophilin and PC-esterase domain family, member 1 3.11085
IRF8 interferon regulatory factor 8 3.11085
CACNA1G calcium channel, voltage-dependent, T type, alpha 1G subunit 3.11085
PTPRD protein tyrosine phosphatase, receptor type, D 3.11085
GGT5 gamma-glutamyltransferase 5 3.11085
TBX20 T-box 20 3.11085
KLHL35 kelch-like family member 35 3.11085
IL5 interleukin 5 3.11085
SLC45A2 solute carrier family 45, member 2 3.11085
RNF113B ring finger protein 113B 3.11085
DYNLRB2 dynein, light chain, roadblock-type 2 3.11085
KL klotho 3.11085
SDR16C5 short chain dehydrogenase/reductase family 16C, member 5 3.11085
SYT15 synaptotagmin XV 3.11085
STYX serine/threonine/tyrosine interacting protein 3.11085
WDR93 WD repeat domain 93 3.11085
IL16 interleukin 16 3.11085
TAS1R1 taste receptor, type 1, member 1 3.11085
SLC12A3 solute carrier family 12 (sodium/chloride transporter), member 3 3.11085
LECT2 leukocyte cell-derived chemotaxin 2 3.11085
SLCO1B3 solute carrier organic anion transporter family, member 1B3 3.11085
CRHR1 corticotropin releasing hormone receptor 1 3.11085
DYTN dystrotelin 3.11085
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 3.11085
DMRT3 doublesex and mab-3 related transcription factor 3 3.11085
SERPIND1 serpin peptidase inhibitor, clade D (heparin cofactor), member 1 3.11085
GSTA1 glutathione S-transferase alpha 1 3.11085
PRH2 proline-rich protein HaeIII subfamily 2 3.11085
DNAJC22 DnaJ (Hsp40) homolog, subfamily C, member 22 3.11085
GPR61 G protein-coupled receptor 61 3.11085
ALOX15B arachidonate 15-lipoxygenase, type B 3.11085
NCR3 natural cytotoxicity triggering receptor 3 3.11085
PLGLB2 plasminogen-like B2 3.11085
MSTN myostatin 3.11085
CD177 CD177 molecule 3.11085
CBFA2T3 core-binding factor, runt domain, alpha subunit 2; translocated to, 3 3.11085
LRRC74A leucine rich repeat containing 74A 3.11085
INTS12 integrator complex subunit 12 3.11085
SMIM17 small integral membrane protein 17 3.11085
C18ORF63 chromosome 18 open reading frame 63 3.11085
C2CD4A C2 calcium-dependent domain containing 4A 3.11085
CGB7 chorionic gonadotropin, beta polypeptide 7 3.11085
AGXT2 alanine--glyoxylate aminotransferase 2 3.11085
APOC4 apolipoprotein C-IV 3.11085
CPA5 carboxypeptidase A5 3.11085
F2RL3 coagulation factor II (thrombin) receptor-like 3 3.11085
PLA1A phospholipase A1 member A 3.11085
ADAM2 ADAM metallopeptidase domain 2 3.11085
IL9R interleukin 9 receptor 3.11085
FGR FGR proto-oncogene, Src family tyrosine kinase 3.11085
TAPBPL TAP binding protein-like 3.11085
KLHL1 kelch-like family member 1 3.11085
EFCAB9 EF-hand calcium binding domain 9 3.11085
AMH anti-Mullerian hormone 3.11085
RBFOX1 RNA binding protein, fox-1 homolog (C. elegans) 1 3.11085
EFCC1 EF-hand and coiled-coil domain containing 1 3.11085
ABCD4 ATP-binding cassette, sub-family D (ALD), member 4 3.11085
GHRH growth hormone releasing hormone 3.11085
WFDC11 WAP four-disulfide core domain 11 3.11085
ITGAX integrin, alpha X (complement component 3 receptor 4 subunit) 3.11085
TMEM184A transmembrane protein 184A 3.11085
GPR78 G protein-coupled receptor 78 3.11085
TMEM255A transmembrane protein 255A 3.11085
ZPBP zona pellucida binding protein 3.11085
SLC36A2 solute carrier family 36 (proton/amino acid symporter), member 2 3.11085
FAM9C family with sequence similarity 9, member C 3.11085
NWD2 NACHT and WD repeat domain containing 2 3.11085
GPAT2 glycerol-3-phosphate acyltransferase 2, mitochondrial 3.11085
CHRNA10 cholinergic receptor, nicotinic, alpha 10 (neuronal) 3.11085
SERTM1 serine-rich and transmembrane domain containing 1 3.11085
RTP3 receptor (chemosensory) transporter protein 3 3.11085
BHLHA15 basic helix-loop-helix family, member a15 3.11085
LRRC24 leucine rich repeat containing 24 3.11085
NMUR2 neuromedin U receptor 2 3.11085
DCST2 DC-STAMP domain containing 2 3.11085
VPREB3 pre-B lymphocyte 3 3.11085
CLEC2A C-type lectin domain family 2, member A 3.11085
RHAG Rh-associated glycoprotein 3.11085
MEIS2 Meis homeobox 2 3.11085
ARHGAP40 Rho GTPase activating protein 40 3.11085
GRAP2 GRB2-related adaptor protein 2 3.11085
LMX1A LIM homeobox transcription factor 1, alpha 3.11085
C22ORF31 chromosome 22 open reading frame 31 3.11085
GREM1 gremlin 1, DAN family BMP antagonist 3.11085
ADAM20 ADAM metallopeptidase domain 20 3.11085
SLC25A34 solute carrier family 25, member 34 3.11085
TAS2R43 taste receptor, type 2, member 43 3.11085
DRC1 dynein regulatory complex subunit 1 3.11085
IL33 interleukin 33 3.11085
TAS2R46 taste receptor, type 2, member 46 3.11085
SLC38A7 solute carrier family 38, member 7 3.08156
ATXN7L1 ataxin 7-like 1 3.03605
GNPTAB N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits 3.00894
DCAF12L1 DDB1 and CUL4 associated factor 12-like 1 2.95891
FAM186B family with sequence similarity 186, member B 2.95891
NOX3 NADPH oxidase 3 2.95891
CLTRN collectrin, amino acid transport regulator 2.95891
LSMEM1 leucine-rich single-pass membrane protein 1 2.95891
MGAT4C MGAT4 family, member C 2.89573
CCDC180 coiled-coil domain containing 180 2.80648
KIAA1958 KIAA1958 2.79082
MICOS10 mitochondrial contact site and cristae organizing system subunit 10 2.78865
NDRG2 NDRG family member 2 2.71244
PIGG phosphatidylinositol glycan anchor biosynthesis, class G 2.69099
ANAPC10 anaphase promoting complex subunit 10 2.65749
FGFBP3 fibroblast growth factor binding protein 3 2.6017
GRIK2 glutamate receptor, ionotropic, kainate 2 2.57898
SH3RF2 SH3 domain containing ring finger 2 2.55716
MACIR macrophage immunometabolism regulator 2.55229
CEP20 centrosomal protein 20 2.52569
TPTE2 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 2.48013
ZNF324B zinc finger protein 324B 2.48013
ANKS4B ankyrin repeat and sterile alpha motif domain containing 4B 2.46279
AQP1 aquaporin 1 (Colton blood group) 2.46279
SHISA9 shisa family member 9 2.42296
CFD complement factor D (adipsin) 2.42258
IGFBP4 insulin-like growth factor binding protein 4 2.36683
CLEC2L C-type lectin domain family 2, member L 2.35208
TMSB4X thymosin beta 4, X-linked 2.34709
KPNA7 karyopherin alpha 7 (importin alpha 8) 2.33965
PCYT1B phosphate cytidylyltransferase 1, choline, beta 2.33816
EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 2.33816
VEPH1 ventricular zone expressed PH domain-containing 1 2.3326
COL10A1 collagen, type X, alpha 1 2.3302
PUS1 pseudouridylate synthase 1 2.30194
CXORF58 chromosome X open reading frame 58 2.295
FLYWCH1 FLYWCH-type zinc finger 1 2.29299
GTF2E1 general transcription factor IIE, polypeptide 1, alpha 56kDa 2.28365
TAMM41 TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae) 2.28081
TNIK TRAF2 and NCK interacting kinase 2.21366
HNRNPK heterogeneous nuclear ribonucleoprotein K 2.17368
ZNF562 zinc finger protein 562 2.17027
ZNF616 zinc finger protein 616 2.14005
ADCY3 adenylate cyclase 3 2.14005
DGAT1 diacylglycerol O-acyltransferase 1 2.12417
CHML choroideremia-like (Rab escort protein 2) 2.10458
ESD esterase D 2.10361
SPINK5 serine peptidase inhibitor, Kazal type 5 2.09275
ANO7 anoctamin 7 2.09039
TRIB2 tribbles pseudokinase 2 2.06507
GNG5 guanine nucleotide binding protein (G protein), gamma 5 2.05778
GNAZ guanine nucleotide binding protein (G protein), alpha z polypeptide 2.04165
COPE coatomer protein complex, subunit epsilon 2.04013
POLR3G polymerase (RNA) III (DNA directed) polypeptide G (32kD) 2.03375
N4BP1 NEDD4 binding protein 1 2.03095
JMJD6 jumonji domain containing 6 2.02879
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 2.02668
WAPL WAPL cohesin release factor 2.01817
GLDN gliomedin 2.00876
ZBTB24 zinc finger and BTB domain containing 24 2.00463
MRPS35 mitochondrial ribosomal protein S35 2.00463
PTPN1 protein tyrosine phosphatase, non-receptor type 1 2.00033

decreased expression

Symbol Name Standardized Value
KRABD3 KRAB domain containing 3 -3.11085
ARID3B AT rich interactive domain 3B (BRIGHT-like) -3.11085
PTX3 pentraxin 3, long -3.11085
LRRC56 leucine rich repeat containing 56 -3.11085
TAL2 T-cell acute lymphocytic leukemia 2 -3.11085
CA7 carbonic anhydrase VII -3.11085
RGPD6 RANBP2-like and GRIP domain containing 6 -3.11085
PHYHIPL phytanoyl-CoA 2-hydroxylase interacting protein-like -3.11085
ACOT12 acyl-CoA thioesterase 12 -3.11085
ARHGEF25 Rho guanine nucleotide exchange factor (GEF) 25 -3.11085
PNMA5 paraneoplastic Ma antigen family member 5 -3.11085
SCIN scinderin -3.11085
DCST1 DC-STAMP domain containing 1 -3.11085
POMC proopiomelanocortin -3.11085
AKR1D1 aldo-keto reductase family 1, member D1 -3.11085
H3C14 H3 clustered histone 14 -3.11085
ODAPH odontogenesis associated phosphoprotein -3.11085
GPR34 G protein-coupled receptor 34 -3.11085
TFF3 trefoil factor 3 (intestinal) -3.11085
NHLH1 nescient helix loop helix 1 -3.11085
CD70 CD70 molecule -3.11085
TUBA4A tubulin, alpha 4a -3.11085
ESR1 estrogen receptor 1 -3.11085
GZMM granzyme M (lymphocyte met-ase 1) -3.11085
HCN2 hyperpolarization activated cyclic nucleotide gated potassium channel 2 -3.11085
LDHAL6A lactate dehydrogenase A-like 6A -3.11085
CD48 CD48 molecule -3.11085
KCTD4 potassium channel tetramerization domain containing 4 -3.11085
TEX12 testis expressed 12 -3.11085
KCTD19 potassium channel tetramerization domain containing 19 -3.11085
DCLK2 doublecortin-like kinase 2 -3.11085
PIH1D2 PIH1 domain containing 2 -3.11085
PLEKHN1 pleckstrin homology domain containing, family N member 1 -3.11085
NMT1 N-myristoyltransferase 1 -3.11085
SV2C synaptic vesicle glycoprotein 2C -3.11085
NACAD NAC alpha domain containing -3.11085
KLK5 kallikrein-related peptidase 5 -3.11085
LRRC36 leucine rich repeat containing 36 -3.11085
ART4 ADP-ribosyltransferase 4 (Dombrock blood group) -3.11085
PYY peptide YY -3.0192
ZMYM2 zinc finger, MYM-type 2 -2.91186
HNMT histamine N-methyltransferase -2.82895
TMEM38A transmembrane protein 38A -2.80859
CHRNA4 cholinergic receptor, nicotinic, alpha 4 (neuronal) -2.80648
DCUN1D1 DCN1, defective in cullin neddylation 1, domain containing 1 -2.7854
TLK1 tousled-like kinase 1 -2.77822
CATSPERQ catsper channel auxiliary subunit theta -2.73864
BCAR1 breast cancer anti-estrogen resistance 1 -2.68596
ZNF664-RFLNA ZNF664-RFLNA readthrough -2.68103
ADGRG2 adhesion G protein-coupled receptor G2 -2.64976
SEMA3G sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G -2.647
FGF4 fibroblast growth factor 4 -2.647
BCL9L B-cell CLL/lymphoma 9-like -2.647
TMEM121B transmembrane protein 121B -2.647
ZNF660-ZNF197 ZNF660-ZNF197 readthrough -2.59319
ASIP agouti signaling protein -2.5801
DHX37 DEAH (Asp-Glu-Ala-His) box polypeptide 37 -2.54433
DERL2 derlin 2 -2.54333
SNX25 sorting nexin 25 -2.51361
BMERB1 bMERB domain containing 1 -2.48465
ARHGEF19 Rho guanine nucleotide exchange factor (GEF) 19 -2.42786
STK31 serine/threonine kinase 31 -2.38888
TSHZ3 teashirt zinc finger homeobox 3 -2.32519
USP45 ubiquitin specific peptidase 45 -2.31707
COL16A1 collagen, type XVI, alpha 1 -2.31587
KLHL26 kelch-like family member 26 -2.295
SYNPO2L synaptopodin 2-like -2.28365
BLOC1S3 biogenesis of lysosomal organelles complex-1, subunit 3 -2.28365
ABHD17C abhydrolase domain containing 17C -2.27331
YY1 YY1 transcription factor -2.26562
ANKRD27 ankyrin repeat domain 27 (VPS9 domain) -2.26562
HTR1A 5-hydroxytryptamine (serotonin) receptor 1A, G protein-coupled -2.21668
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -2.21668
UBL4A ubiquitin-like 4A -2.21366
HLA-DRB1 major histocompatibility complex, class II, DR beta 1 -2.21297
TMEM63B transmembrane protein 63B -2.18158
PLD2 phospholipase D2 -2.17877
TESK2 testis-specific kinase 2 -2.17761
PI4K2B phosphatidylinositol 4-kinase type 2 beta -2.17027
MARCHF9 membrane associated ring-CH-type finger 9 -2.14005
APBB3 amyloid beta (A4) precursor protein-binding, family B, member 3 -2.14005
PZP pregnancy-zone protein -2.14005
SOX21 SRY (sex determining region Y)-box 21 -2.14005
CCDC73 coiled-coil domain containing 73 -2.14005
CPQ carboxypeptidase Q -2.1265
PTPRG protein tyrosine phosphatase, receptor type, G -2.12308
ALOX12B arachidonate 12-lipoxygenase, 12R type -2.09374
SCN2A sodium channel, voltage gated, type II alpha subunit -2.09121
ATAD3C ATPase family, AAA domain containing 3C -2.09121
CHCHD5 coiled-coil-helix-coiled-coil-helix domain containing 5 -2.09039
DIDO1 death inducer-obliterator 1 -2.08012
SHANK2 SH3 and multiple ankyrin repeat domains 2 -2.07143
LMCD1 LIM and cysteine-rich domains 1 -2.05435
TMEM108 transmembrane protein 108 -2.05345
LTN1 listerin E3 ubiquitin protein ligase 1 -2.05054
ACKR4 atypical chemokine receptor 4 -2.05054
NPC2 Niemann-Pick disease, type C2 -2.04173
APIP APAF1 interacting protein -2.03658
INAFM2 InaF-motif containing 2 -2.02695
SSH3 slingshot protein phosphatase 3 -2.01917
NDNF neuron-derived neurotrophic factor -2.01884
DEPTOR DEP domain containing MTOR-interacting protein -2.00033