AT7519_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description AT7519 perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the AT7519_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PEG10 paternally expressed 10 0.113583
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0855427
GPC3 glypican 3 0.0830847
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0815814
HDAC9 histone deacetylase 9 0.08092
TRIO trio Rho guanine nucleotide exchange factor 0.0652723
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) 0.0647165
SYT1 synaptotagmin I 0.0579391
RASAL2 RAS protein activator like 2 0.0565804
TENM2 teneurin transmembrane protein 2 0.055437
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.0527451
ZFAND3 zinc finger, AN1-type domain 3 0.0514084
ZNF292 zinc finger protein 292 0.0508633
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0475849
APP amyloid beta (A4) precursor protein 0.0469909
ANKRD33B ankyrin repeat domain 33B 0.0461794
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0454075
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 0.0453638
ENAH enabled homolog (Drosophila) 0.0445405
PPP1R12A protein phosphatase 1, regulatory subunit 12A 0.0440305
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0438031
IGF1R insulin-like growth factor 1 receptor 0.0437433
TRA2A transformer 2 alpha homolog (Drosophila) 0.040791
SLIT2 slit homolog 2 (Drosophila) 0.0406103
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0388976
ADGRL2 adhesion G protein-coupled receptor L2 0.0388346
PGAP1 post-GPI attachment to proteins 1 0.0387909
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 0.0385479
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0376065
SAMD4A sterile alpha motif domain containing 4A 0.0372588
ZNF217 zinc finger protein 217 0.0367215
CDH10 cadherin 10, type 2 (T2-cadherin) 0.0364727
CDC73 cell division cycle 73 0.0352355
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0347215
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0343183
EEF2 eukaryotic translation elongation factor 2 0.0338943
TTC28 tetratricopeptide repeat domain 28 0.0337663
ZEB2 zinc finger E-box binding homeobox 2 0.0328576
DST dystonin 0.0325527
FUBP1 far upstream element (FUSE) binding protein 1 0.032072
PLEKHG1 pleckstrin homology domain containing, family G (with RhoGef domain) member 1 0.0318785
TRPS1 trichorhinophalangeal syndrome I 0.0314062
EPRS1 glutamyl-prolyl-tRNA synthetase 1 0.031349
TAS2R14 taste receptor, type 2, member 14 0.0312289
NRG1 neuregulin 1 0.030911
FOXO1 forkhead box O1 0.0306596
RBM20 RNA binding motif protein 20 0.0304384
PCLO piccolo presynaptic cytomatrix protein 0.0300791
ADGRL3 adhesion G protein-coupled receptor L3 0.0300182
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0297363
DDAH1 dimethylarginine dimethylaminohydrolase 1 0.0296659
NCOA2 nuclear receptor coactivator 2 0.0294699
CCN2 cellular communication network factor 2 0.0292684
ZC3H13 zinc finger CCCH-type containing 13 0.0286198
PLPP1 phospholipid phosphatase 1 0.0283529
RFPL4B ret finger protein-like 4B 0.0282284
PUM1 pumilio RNA-binding family member 1 0.028114
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0280487
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5 0.027955
ZSWIM6 zinc finger, SWIM-type containing 6 0.0278595
MRPS30 mitochondrial ribosomal protein S30 0.0278188
FBXO11 F-box protein 11 0.0277012
EPB41L3 erythrocyte membrane protein band 4.1-like 3 0.0276454
TSC22D2 TSC22 domain family, member 2 0.0275511
FNDC3B fibronectin type III domain containing 3B 0.0274687
CDH19 cadherin 19, type 2 0.0273264
USP25 ubiquitin specific peptidase 25 0.0272631
UTRN utrophin 0.027115
TMSB4X thymosin beta 4, X-linked 0.0266503
OSBPL10 oxysterol binding protein-like 10 0.0263817
MTCL1 microtubule crosslinking factor 1 0.0261154
CPA6 carboxypeptidase A6 0.0259957
MED13L mediator complex subunit 13-like 0.0259228
COL5A2 collagen, type V, alpha 2 0.0255358
THBS1 thrombospondin 1 0.0254976
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.025225
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.025105
ZNF146 zinc finger protein 146 0.025081
DOCK5 dedicator of cytokinesis 5 0.024998
NEBL nebulette 0.0247687
RBM28 RNA binding motif protein 28 0.0245558
MKI67 marker of proliferation Ki-67 0.0239019
ITSN2 intersectin 2 0.0238233
FOXP2 forkhead box P2 0.0235699
LIN28B lin-28 homolog B (C. elegans) 0.0235162
TMEM64 transmembrane protein 64 0.0234246
HP1BP3 heterochromatin protein 1, binding protein 3 0.0233857
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0233529
YARS1 tyrosyl-tRNA synthetase 1 0.0233098
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0232439
MTF2 metal response element binding transcription factor 2 0.0231429
USP15 ubiquitin specific peptidase 15 0.0231396
SMG7 SMG7 nonsense mediated mRNA decay factor 0.0231277
STAG2 stromal antigen 2 0.023004
ADGRV1 adhesion G protein-coupled receptor V1 0.0228491
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0227954
PLK2 polo-like kinase 2 0.0227169
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0226845
MED12L mediator complex subunit 12-like 0.0226021
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0225363

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.15852
VIM vimentin -0.128396
PTMA prothymosin, alpha -0.104117
CADM2 cell adhesion molecule 2 -0.0944548
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.089031
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.0801335
RPL35A ribosomal protein L35a -0.0791948
COL11A1 collagen, type XI, alpha 1 -0.076058
RPS8 ribosomal protein S8 -0.0735881
RPLP1 ribosomal protein, large, P1 -0.0711752
RPS6 ribosomal protein S6 -0.0676432
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.066714
MDK midkine (neurite growth-promoting factor 2) -0.0577618
RPS16 ribosomal protein S16 -0.0558255
RPL11 ribosomal protein L11 -0.0541801
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0526117
RPL23 ribosomal protein L23 -0.0520811
RPL19 ribosomal protein L19 -0.0466775
ITGAV integrin, alpha V -0.0437516
RPL31 ribosomal protein L31 -0.0433212
RPL5 ribosomal protein L5 -0.0430641
FTL ferritin, light polypeptide -0.042455
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0395864
RPS21 ribosomal protein S21 -0.0392944
RPS25 ribosomal protein S25 -0.0385873
MEIS2 Meis homeobox 2 -0.0367298
WSB1 WD repeat and SOCS box containing 1 -0.0366128
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0361309
PARD3B par-3 family cell polarity regulator beta -0.0348351
CBX3 chromobox homolog 3 -0.0337815
RPS13 ribosomal protein S13 -0.0335436
NDRG1 N-myc downstream regulated 1 -0.0334004
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0332831
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0330422
MRPS6 mitochondrial ribosomal protein S6 -0.0326631
HSPB1 heat shock 27kDa protein 1 -0.0325536
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0325402
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0321738
S100A9 S100 calcium binding protein A9 -0.0319581
NR2F1 nuclear receptor subfamily 2, group F, member 1 -0.0319478
TPT1 tumor protein, translationally-controlled 1 -0.0318705
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0313566
RPL34 ribosomal protein L34 -0.0310356
THOC2 THO complex 2 -0.0308912
RPL12 ribosomal protein L12 -0.0307964
RPS12 ribosomal protein S12 -0.030079
PRRC2C proline-rich coiled-coil 2C -0.0294083
NAMPT nicotinamide phosphoribosyltransferase -0.0294038
NPEPPS aminopeptidase puromycin sensitive -0.0294017
S100A10 S100 calcium binding protein A10 -0.0290532
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0289227
PFN1 profilin 1 -0.0288812
RPS19 ribosomal protein S19 -0.0287285
RPL36A ribosomal protein L36a -0.0286741
SERF2 small EDRK-rich factor 2 -0.0279763
RPLP0 ribosomal protein, large, P0 -0.0277362
SNX6 sorting nexin 6 -0.0276848
SMYD3 SET and MYND domain containing 3 -0.0276213
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0273662
B2M beta-2-microglobulin -0.027194
RPLP2 ribosomal protein, large, P2 -0.0270457
PBX3 pre-B-cell leukemia homeobox 3 -0.0268657
DEK DEK proto-oncogene -0.0261746
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0256853
RAD51B RAD51 paralog B -0.0255127
KPNB1 karyopherin (importin) beta 1 -0.0255022
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) -0.0254606
NACA nascent polypeptide-associated complex alpha subunit -0.0254434
RPL28 ribosomal protein L28 -0.0252487
DPYD dihydropyrimidine dehydrogenase -0.0252398
PRTG protogenin -0.0244596
ASTN2 astrotactin 2 -0.0244356
RPL8 ribosomal protein L8 -0.0243206
TOX thymocyte selection-associated high mobility group box -0.0242904
TPM4 tropomyosin 4 -0.0241958
PARD3 par-3 family cell polarity regulator -0.0241661
MYO9B myosin IXB -0.0241562
FN1 fibronectin 1 -0.0239017
FTH1 ferritin, heavy polypeptide 1 -0.0238241
MYL12B myosin, light chain 12B, regulatory -0.0237636
KCTD16 potassium channel tetramerization domain containing 16 -0.0237112
PKM pyruvate kinase, muscle -0.0235945
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0234374
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0234149
SMIM44 small integral membrane protein 44 -0.0229513
RPL36 ribosomal protein L36 -0.0228703
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0228132
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0227842
RTN4 reticulon 4 -0.0223756
PDIA3 protein disulfide isomerase family A, member 3 -0.0221848
RPS14 ribosomal protein S14 -0.0218542
PCDH9 protocadherin 9 -0.0216954
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0216354
BBX bobby sox homolog (Drosophila) -0.0215529
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0213003
RPS11 ribosomal protein S11 -0.0212321
CNRIP1 cannabinoid receptor interacting protein 1 -0.0211428
DPPA4 developmental pluripotency associated 4 -0.0208397
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 -0.0204523
RAB6A RAB6A, member RAS oncogene family -0.0204063