AT7519_SNU-423 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description AT7519 perturbation in SNU-423 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the AT7519_SNU-423 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VIM vimentin 0.256459
IGFBP3 insulin-like growth factor binding protein 3 0.139162
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.136439
GLIS3 GLIS family zinc finger 3 0.134573
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 0.131796
FTH1 ferritin, heavy polypeptide 1 0.130374
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.124967
CD44 CD44 molecule (Indian blood group) 0.111019
COL6A3 collagen, type VI, alpha 3 0.108311
HMGA2 high mobility group AT-hook 2 0.10758
B2M beta-2-microglobulin 0.094143
AKAP12 A kinase (PRKA) anchor protein 12 0.0935537
HDAC9 histone deacetylase 9 0.0920833
LDHA lactate dehydrogenase A 0.0881988
EEF2 eukaryotic translation elongation factor 2 0.0865197
CALR calreticulin 0.0786455
EXT1 exostosin glycosyltransferase 1 0.0733894
CDH13 cadherin 13 0.0705047
FTL ferritin, light polypeptide 0.0703286
HLA-B major histocompatibility complex, class I, B 0.0698881
FN1 fibronectin 1 0.0695555
MARCKS myristoylated alanine-rich protein kinase C substrate 0.0670924
VEGFA vascular endothelial growth factor A 0.0662522
VCAN versican 0.066091
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A 0.0652781
HLA-E major histocompatibility complex, class I, E 0.0640753
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 0.064004
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0634134
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0630632
AHNAK AHNAK nucleoprotein 0.0626034
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0612896
PGK1 phosphoglycerate kinase 1 0.0601708
COL5A1 collagen, type V, alpha 1 0.0594029
MACF1 microtubule-actin crosslinking factor 1 0.0582255
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0579924
IER3 immediate early response 3 0.0575684
ASPH aspartate beta-hydroxylase 0.0567945
HLA-A major histocompatibility complex, class I, A 0.0549881
PLIN2 perilipin 2 0.05323
SFTPA2 surfactant protein A2 0.052595
RND3 Rho family GTPase 3 0.0520007
SQSTM1 sequestosome 1 0.0511563
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.0508358
ZSWIM6 zinc finger, SWIM-type containing 6 0.0506603
ENO1 enolase 1, (alpha) 0.0473203
ATXN1 ataxin 1 0.0450156
CANX calnexin 0.0448885
RNF213 ring finger protein 213 0.0441017
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0434104
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0434097
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0426315
INTS6 integrator complex subunit 6 0.041869
EPAS1 endothelial PAS domain protein 1 0.0418613
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.041381
ZBTB38 zinc finger and BTB domain containing 38 0.0407428
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0404334
TMSB4X thymosin beta 4, X-linked 0.0404048
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.040101
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0399917
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0396695
SLC38A2 solute carrier family 38, member 2 0.0387621
ZFP36L1 ZFP36 ring finger protein-like 1 0.0386691
BICC1 BicC family RNA binding protein 1 0.0381794
ZBTB20 zinc finger and BTB domain containing 20 0.0373101
ZMYND8 zinc finger, MYND-type containing 8 0.0371893
NAV1 neuron navigator 1 0.0367015
SFRP1 secreted frizzled-related protein 1 0.0361901
BTG1 B-cell translocation gene 1, anti-proliferative 0.0357867
RPS4X ribosomal protein S4, X-linked 0.0357382
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 0.0352441
VCL vinculin 0.0347227
CTSB cathepsin B 0.033769
RAB7A RAB7A, member RAS oncogene family 0.0332137
DIAPH2 diaphanous-related formin 2 0.0330786
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0327555
EGFR epidermal growth factor receptor 0.0327288
LPP LIM domain containing preferred translocation partner in lipoma 0.0325599
EGR1 early growth response 1 0.0324167
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0322865
TMEM132D transmembrane protein 132D 0.0317395
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0317108
PAPPA pregnancy-associated plasma protein A, pappalysin 1 0.0313933
CAMK1D calcium/calmodulin-dependent protein kinase ID 0.0312755
IFITM3 interferon induced transmembrane protein 3 0.0306633
PNRC1 proline-rich nuclear receptor coactivator 1 0.0303202
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II 0.0299331
FAM20C family with sequence similarity 20, member C 0.029916
EFNA5 ephrin-A5 0.0298082
COL7A1 collagen, type VII, alpha 1 0.0297986
PTPRK protein tyrosine phosphatase, receptor type, K 0.0297936
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0294659
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.029142
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0289416
NDRG1 N-myc downstream regulated 1 0.0289392
FBXO32 F-box protein 32 0.0286219
INHBA inhibin, beta A 0.028525
AFF3 AF4/FMR2 family, member 3 0.0285062
ZHX2 zinc fingers and homeoboxes 2 0.0281347
TRIM55 tripartite motif containing 55 0.0278967
ACTG1 actin gamma 1 0.0278659

decreased expression

Symbol Name Standardized Value
NAMPT nicotinamide phosphoribosyltransferase -0.185411
ELL2 elongation factor, RNA polymerase II, 2 -0.0863058
SPAG9 sperm associated antigen 9 -0.0749543
TOP2A topoisomerase (DNA) II alpha 170kDa -0.065627
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.064708
NAV2 neuron navigator 2 -0.0643784
MKI67 marker of proliferation Ki-67 -0.0601655
RTN4 reticulon 4 -0.0548539
CENPF centromere protein F, 350/400kDa -0.0534605
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0518842
RPS2 ribosomal protein S2 -0.0470294
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0464153
ANLN anillin, actin binding protein -0.0451021
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0438945
OGA O-GlcNAcase -0.0413274
MT2A metallothionein 2A -0.0403229
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0383131
UGCG UDP-glucose ceramide glucosyltransferase -0.0378455
ARRDC3 arrestin domain containing 3 -0.0368412
MSN moesin -0.0364869
CKAP5 cytoskeleton associated protein 5 -0.0364562
TNIP1 TNFAIP3 interacting protein 1 -0.0345272
KIF4A kinesin family member 4A -0.0344351
ZNF292 zinc finger protein 292 -0.0343071
SBF2 SET binding factor 2 -0.0335101
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0334676
DUSP5 dual specificity phosphatase 5 -0.0330358
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0319131
TPX2 TPX2, microtubule-associated -0.0317054
RB1CC1 RB1-inducible coiled-coil 1 -0.0316487
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0308456
ESYT2 extended synaptotagmin-like protein 2 -0.0305253
AFDN afadin, adherens junction formation factor -0.0303332
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0301812
PHIP pleckstrin homology domain interacting protein -0.0290617
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0290314
GOLGA4 golgin A4 -0.0286189
CDCP1 CUB domain containing protein 1 -0.0283895
CCNL1 cyclin L1 -0.0282948
TMEM41B transmembrane protein 41B -0.0279538
PNISR PNN-interacting serine/arginine-rich protein -0.0277765
RBM39 RNA binding motif protein 39 -0.0268994
XPO1 exportin 1 -0.0262924
JMJD1C jumonji domain containing 1C -0.0260164
PRR11 proline rich 11 -0.0252896
SYAP1 synapse associated protein 1 -0.025156
BIRC2 baculoviral IAP repeat containing 2 -0.0239939
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0238548
DIAPH3 diaphanous-related formin 3 -0.0232677
RASA2 RAS p21 protein activator 2 -0.0230057
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0229261
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0226018
PLPP6 phospholipid phosphatase 6 -0.0225368
KDM3A lysine (K)-specific demethylase 3A -0.0219895
TENT5A terminal nucleotidyltransferase 5A -0.0215626
PTBP3 polypyrimidine tract binding protein 3 -0.0213171
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0212186
GAS2L3 growth arrest-specific 2 like 3 -0.0209884
RAB6A RAB6A, member RAS oncogene family -0.0208506
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0208456
ZFC3H1 zinc finger, C3H1-type containing -0.0207507
LCORL ligand dependent nuclear receptor corepressor-like -0.0206026
PCBP2 poly(rC) binding protein 2 -0.0206
KLF7 Kruppel-like factor 7 (ubiquitous) -0.020599
FNDC3B fibronectin type III domain containing 3B -0.0203978
PTMA prothymosin, alpha -0.020023
TRAF3IP2 TRAF3 interacting protein 2 -0.0196548
CDKN2A cyclin-dependent kinase inhibitor 2A -0.0196157
BCLAF1 BCL2-associated transcription factor 1 -0.0192956
MATR3 matrin 3 -0.0192081
ABCA5 ATP-binding cassette, sub-family A (ABC1), member 5 -0.0187873
SET SET nuclear proto-oncogene -0.0187462
MIS18BP1 MIS18 binding protein 1 -0.0187097
FHIP1A FHF complex subunit HOOK interacting protein 1A -0.0187014
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0186221
PTBP2 polypyrimidine tract binding protein 2 -0.018356
ICAM1 intercellular adhesion molecule 1 -0.0183475
TXNRD1 thioredoxin reductase 1 -0.0181955
ADM adrenomedullin -0.0177351
NT5C2 5'-nucleotidase, cytosolic II -0.0176685
ATP13A3 ATPase type 13A3 -0.0174582
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0173835
WSB1 WD repeat and SOCS box containing 1 -0.0173736
NEK7 NIMA-related kinase 7 -0.0173583
SMC4 structural maintenance of chromosomes 4 -0.0173068
KIF11 kinesin family member 11 -0.0172696
UBR2 ubiquitin protein ligase E3 component n-recognin 2 -0.0171937
SRP54 signal recognition particle 54kDa -0.0170835
USP47 ubiquitin specific peptidase 47 -0.0170048
DENND4C DENN/MADD domain containing 4C -0.0169914
SERINC1 serine incorporator 1 -0.0169673
CKAP2 cytoskeleton associated protein 2 -0.0169142
RPS18 ribosomal protein S18 -0.0167362
ARF4 ADP-ribosylation factor 4 -0.0166129
ECPAS Ecm29 proteasome adaptor and scaffold -0.0164597
USP12 ubiquitin specific peptidase 12 -0.0163367
NUP58 nucleoporin 58 -0.0162805
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide -0.0161765
MYH9 myosin, heavy chain 9, non-muscle -0.0161703
KMT2E lysine (K)-specific methyltransferase 2E -0.0160896