AT7519_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description AT7519 perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the AT7519_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
B2M beta-2-microglobulin 0.184473
MYH9 myosin, heavy chain 9, non-muscle 0.127744
COL6A3 collagen, type VI, alpha 3 0.12295
NDRG1 N-myc downstream regulated 1 0.109181
FTH1 ferritin, heavy polypeptide 1 0.0860981
CD44 CD44 molecule (Indian blood group) 0.0860919
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.0845669
VEGFA vascular endothelial growth factor A 0.0712559
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0669988
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0630272
PKM pyruvate kinase, muscle 0.0626806
CALR calreticulin 0.0601877
RNF145 ring finger protein 145 0.0593598
KMT2E lysine (K)-specific methyltransferase 2E 0.0583885
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.0562497
KYNU kynureninase 0.0546672
POTEF POTE ankyrin domain family, member F 0.0480952
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0471748
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0469376
ZNF292 zinc finger protein 292 0.0462794
ELL2 elongation factor, RNA polymerase II, 2 0.045069
EXT1 exostosin glycosyltransferase 1 0.0442611
IGFBP3 insulin-like growth factor binding protein 3 0.0434051
FNDC3B fibronectin type III domain containing 3B 0.0433487
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0420005
RYBP RING1 and YY1 binding protein 0.0419892
TXNIP thioredoxin interacting protein 0.0415779
ARRDC3 arrestin domain containing 3 0.0415032
BHLHE40 basic helix-loop-helix family, member e40 0.0392481
NAMPT nicotinamide phosphoribosyltransferase 0.0385116
HILPDA hypoxia inducible lipid droplet-associated 0.0381043
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0378499
RNF24 ring finger protein 24 0.0369445
NRXN3 neurexin 3 0.03668
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0355125
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0350746
ZNF395 zinc finger protein 395 0.0347605
CYLD cylindromatosis (turban tumor syndrome) 0.0346829
UGCG UDP-glucose ceramide glucosyltransferase 0.0343757
MARCKS myristoylated alanine-rich protein kinase C substrate 0.0336885
ANXA5 annexin A5 0.0327651
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.0326059
MSN moesin 0.0321915
TRA2A transformer 2 alpha homolog (Drosophila) 0.031791
PCBP2 poly(rC) binding protein 2 0.0310728
RTN4 reticulon 4 0.0304232
FNDC3A fibronectin type III domain containing 3A 0.0301868
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0300772
MYADM myeloid-associated differentiation marker 0.0300651
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0300443
GRID1 glutamate receptor, ionotropic, delta 1 0.0298986
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0295534
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0290547
IGFBP5 insulin-like growth factor binding protein 5 0.0290361
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0289926
MATR3 matrin 3 0.0288839
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0287492
INSIG2 insulin induced gene 2 0.0286171
ANKRD28 ankyrin repeat domain 28 0.0285139
CCNL1 cyclin L1 0.0284487
ZNF638 zinc finger protein 638 0.0283991
GLS2 glutaminase 2 (liver, mitochondrial) 0.0282739
EIF4A1 eukaryotic translation initiation factor 4A1 0.0282729
ATP13A3 ATPase type 13A3 0.0282511
UBA6 ubiquitin-like modifier activating enzyme 6 0.0281737
CAV1 caveolin 1, caveolae protein, 22kDa 0.0281336
MAP1B microtubule-associated protein 1B 0.0276449
MXI1 MAX interactor 1, dimerization protein 0.0276285
COL5A1 collagen, type V, alpha 1 0.0275436
MKI67 marker of proliferation Ki-67 0.0274999
AP2B1 adaptor-related protein complex 2, beta 1 subunit 0.0274894
FAM13A family with sequence similarity 13, member A 0.0274665
FAT1 FAT atypical cadherin 1 0.0272549
ZMIZ1 zinc finger, MIZ-type containing 1 0.026978
MYLK myosin light chain kinase 0.0268829
ANKRD37 ankyrin repeat domain 37 0.0268803
SMAD3 SMAD family member 3 0.0266507
SYNPO synaptopodin 0.0265291
SSBP2 single-stranded DNA binding protein 2 0.0263067
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0262058
MEF2A myocyte enhancer factor 2A 0.0261905
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0261786
MACF1 microtubule-actin crosslinking factor 1 0.0261677
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0255243
CCNI cyclin I 0.0254036
ITM2B integral membrane protein 2B 0.0253633
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0252795
FUS FUS RNA binding protein 0.0251999
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0251578
ERBIN erbb2 interacting protein 0.0249815
TENT2 terminal nucleotidyltransferase 2 0.0249289
AOPEP aminopeptidase O (putative) 0.0248519
TPI1 triosephosphate isomerase 1 0.0243769
PTGES2 prostaglandin E synthase 2 0.0243058
HOOK2 hook microtubule-tethering protein 2 0.0240607
TAGLN2 transgelin 2 0.0240418
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 0.0238716
SNX13 sorting nexin 13 0.0238702
COL7A1 collagen, type VII, alpha 1 0.0238453
IL6ST interleukin 6 signal transducer 0.0238372

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.172956
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.162631
TMSB10 thymosin beta 10 -0.111348
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0786571
HLA-B major histocompatibility complex, class I, B -0.0699565
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0665223
HMGA2 high mobility group AT-hook 2 -0.064594
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0598799
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0572883
CDH13 cadherin 13 -0.0548244
WSB1 WD repeat and SOCS box containing 1 -0.0534415
TPT1 tumor protein, translationally-controlled 1 -0.0523302
PTMA prothymosin, alpha -0.0519102
RAD51B RAD51 paralog B -0.0518781
ZMYND8 zinc finger, MYND-type containing 8 -0.0493653
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0480867
S100A6 S100 calcium binding protein A6 -0.045963
F3 coagulation factor III (thromboplastin, tissue factor) -0.0436478
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0433201
RAI14 retinoic acid induced 14 -0.0429838
MT2A metallothionein 2A -0.0421484
TUBB tubulin, beta class I -0.0415474
EIF1 eukaryotic translation initiation factor 1 -0.0410513
RPLP1 ribosomal protein, large, P1 -0.040972
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0404382
NAV2 neuron navigator 2 -0.0403761
RRBP1 ribosome binding protein 1 -0.0399547
BACE2 beta-site APP-cleaving enzyme 2 -0.0387056
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0380705
RPS5 ribosomal protein S5 -0.0380367
PRRC2C proline-rich coiled-coil 2C -0.0379579
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0378385
TPM4 tropomyosin 4 -0.0375769
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0373765
RPS23 ribosomal protein S23 -0.0369946
PDE4D phosphodiesterase 4D, cAMP-specific -0.0363883
RPS8 ribosomal protein S8 -0.0361107
EFNA5 ephrin-A5 -0.0361039
AHNAK AHNAK nucleoprotein -0.0352683
RPS24 ribosomal protein S24 -0.0347478
LIMS1 LIM and senescent cell antigen-like domains 1 -0.0335499
TM4SF1 transmembrane 4 L six family member 1 -0.0334657
PSD3 pleckstrin and Sec7 domain containing 3 -0.0334564
RPL34 ribosomal protein L34 -0.0332268
KMT2C lysine (K)-specific methyltransferase 2C -0.0326326
ANKRD17 ankyrin repeat domain 17 -0.0323896
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0322923
NSD3 nuclear receptor binding SET domain protein 3 -0.0322738
RBMS1 RNA binding motif, single stranded interacting protein 1 -0.0314547
CHD9 chromodomain helicase DNA binding protein 9 -0.0311493
TTC3 tetratricopeptide repeat domain 3 -0.0308657
RPS11 ribosomal protein S11 -0.0307898
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0306716
RPL37 ribosomal protein L37 -0.0306041
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0304931
CDK13 cyclin-dependent kinase 13 -0.0303731
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0301736
SDC4 syndecan 4 -0.0299334
TMSB4X thymosin beta 4, X-linked -0.0298719
MT1X metallothionein 1X -0.0295939
COL6A2 collagen, type VI, alpha 2 -0.0292891
RASA2 RAS p21 protein activator 2 -0.0290477
RPL35A ribosomal protein L35a -0.0283185
DHRSX dehydrogenase/reductase (SDR family) X-linked -0.0278804
BIRC6 baculoviral IAP repeat containing 6 -0.0273691
MORF4L2 mortality factor 4 like 2 -0.0273282
ITCH itchy E3 ubiquitin protein ligase -0.0270405
RPL26 ribosomal protein L26 -0.0267798
RPLP2 ribosomal protein, large, P2 -0.0260524
FBXO11 F-box protein 11 -0.0260176
VCL vinculin -0.0258881
ENO1 enolase 1, (alpha) -0.0256774
KAZN kazrin, periplakin interacting protein -0.0255749
MAP4 microtubule-associated protein 4 -0.0253938
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 -0.0253624
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0253154
ZFAND3 zinc finger, AN1-type domain 3 -0.0252615
LUC7L LUC7-like (S. cerevisiae) -0.0251456
CAVIN1 caveolae associated protein 1 -0.0250078
IARS1 isoleucyl-tRNA synthetase 1 -0.0248092
RPL12 ribosomal protein L12 -0.0247983
LASP1 LIM and SH3 protein 1 -0.0247871
SMYD3 SET and MYND domain containing 3 -0.0247724
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.024641
CLINT1 clathrin interactor 1 -0.0244519
TM9SF3 transmembrane 9 superfamily member 3 -0.024444
PCNX4 pecanex 4 -0.0243336
RPS19 ribosomal protein S19 -0.024309
PURA purine-rich element binding protein A -0.0242704
TAS2R14 taste receptor, type 2, member 14 -0.0240721
BDP1 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB -0.0240214
FRMD6 FERM domain containing 6 -0.0240092
LPP LIM domain containing preferred translocation partner in lipoma -0.0236444
AUTS2 autism susceptibility candidate 2 -0.0235355
PPP3R1 protein phosphatase 3, regulatory subunit B, alpha -0.023504
H3-3B H3.3 histone B -0.0233276
NBAS neuroblastoma amplified sequence -0.0231325
OSMR oncostatin M receptor -0.0231116
CALU calumenin -0.0231042
ARHGAP5 Rho GTPase activating protein 5 -0.0227