Abemaciclib_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Abemaciclib perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Abemaciclib_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.102213
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0770945
VCL vinculin 0.0710501
FAM107B family with sequence similarity 107, member B 0.0700981
FMN1 formin 1 0.0689043
ZSWIM6 zinc finger, SWIM-type containing 6 0.065074
BICD1 bicaudal D homolog 1 (Drosophila) 0.0636804
SEPTIN9 septin 9 0.0634854
TLE4 transducin-like enhancer of split 4 0.0621712
TNFRSF19 tumor necrosis factor receptor superfamily, member 19 0.0576494
PTPRD protein tyrosine phosphatase, receptor type, D 0.0572719
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0547923
EXT1 exostosin glycosyltransferase 1 0.0534905
FNDC3A fibronectin type III domain containing 3A 0.0530138
PRKCA protein kinase C, alpha 0.0522292
DST dystonin 0.0520084
MRTFA myocardin related transcription factor A 0.0511227
PEAK1 pseudopodium-enriched atypical kinase 1 0.0492265
CLTC clathrin, heavy chain (Hc) 0.0483224
KLHL13 kelch-like family member 13 0.046565
DKK2 dickkopf WNT signaling pathway inhibitor 2 0.043619
DNM3 dynamin 3 0.0432968
DACH2 dachshund family transcription factor 2 0.0421285
SIK2 salt-inducible kinase 2 0.042084
FRMD5 FERM domain containing 5 0.041943
LINGO2 leucine rich repeat and Ig domain containing 2 0.0411939
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0409859
ZMIZ1 zinc finger, MIZ-type containing 1 0.0399026
VMP1 vacuole membrane protein 1 0.0398237
MMP16 matrix metallopeptidase 16 (membrane-inserted) 0.0396664
PTEN phosphatase and tensin homolog 0.0394029
DGKH diacylglycerol kinase, eta 0.039154
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0383656
ZFAND3 zinc finger, AN1-type domain 3 0.0381361
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.03697
MAP1B microtubule-associated protein 1B 0.0362733
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0357474
NPAS2 neuronal PAS domain protein 2 0.0352161
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0348452
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0339518
PDLIM5 PDZ and LIM domain 5 0.0331656
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0330418
NCAM2 neural cell adhesion molecule 2 0.0327486
GREM2 gremlin 2, DAN family BMP antagonist 0.0325388
NRIP1 nuclear receptor interacting protein 1 0.0321488
INTS6 integrator complex subunit 6 0.0315419
PTPRK protein tyrosine phosphatase, receptor type, K 0.0310795
PCBP3 poly(rC) binding protein 3 0.0308187
SEC24D SEC24 family member D 0.0302863
SEC31A SEC31 homolog A (S. cerevisiae) 0.0302064
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0297563
COPA coatomer protein complex, subunit alpha 0.0297057
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0292481
PRRC2C proline-rich coiled-coil 2C 0.0289836
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.0285741
LARGE1 LARGE xylosyl- and glucuronyltransferase 1 0.0281028
TENM4 teneurin transmembrane protein 4 0.0278143
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0276688
MED13 mediator complex subunit 13 0.027273
HOMER1 homer scaffolding protein 1 0.0271072
TCF12 transcription factor 12 0.0269258
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 0.0268976
AOPEP aminopeptidase O (putative) 0.0266618
SLIT2 slit homolog 2 (Drosophila) 0.0266222
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0262745
EPHA4 EPH receptor A4 0.0262626
GOLGA4 golgin A4 0.0261385
LONRF2 LON peptidase N-terminal domain and ring finger 2 0.0258581
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0256032
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0253582
MALT1 MALT1 paracaspase 0.0253383
HSPA8 heat shock 70kDa protein 8 0.0246972
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0246936
CHD9 chromodomain helicase DNA binding protein 9 0.0245848
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0243649
USP36 ubiquitin specific peptidase 36 0.0243506
XPR1 xenotropic and polytropic retrovirus receptor 1 0.0240686
PCDH15 protocadherin-related 15 0.0238635
CAMKMT calmodulin-lysine N-methyltransferase 0.0237703
ITGA1 integrin, alpha 1 0.0236423
TRPS1 trichorhinophalangeal syndrome I 0.0235842
PTK2 protein tyrosine kinase 2 0.0234188
MEF2A myocyte enhancer factor 2A 0.0229844
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0228274
CPEB4 cytoplasmic polyadenylation element binding protein 4 0.0227824
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0225835
SCFD2 sec1 family domain containing 2 0.0225639
AFF3 AF4/FMR2 family, member 3 0.0223995
KMT2C lysine (K)-specific methyltransferase 2C 0.0223887
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0218129
AP3B1 adaptor-related protein complex 3, beta 1 subunit 0.0216701
FLT1 fms-related tyrosine kinase 1 0.02162
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0215158
UBAP2 ubiquitin associated protein 2 0.0213825
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0213025
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0212148
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0210714
HDLBP high density lipoprotein binding protein 0.0210563
SIK3 SIK family kinase 3 0.021049
HECW2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 0.0209805

decreased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 -0.235849
AKAP12 A kinase (PRKA) anchor protein 12 -0.173879
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.137623
ZBTB20 zinc finger and BTB domain containing 20 -0.0977653
VIM vimentin -0.091031
NALF1 NALCN channel auxiliary factor 1 -0.0830525
NRG1 neuregulin 1 -0.0817288
LSAMP limbic system-associated membrane protein -0.0744062
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0607831
NDRG1 N-myc downstream regulated 1 -0.0535454
PSD3 pleckstrin and Sec7 domain containing 3 -0.0486276
RPL23 ribosomal protein L23 -0.0471841
LIMCH1 LIM and calponin homology domains 1 -0.0461004
DPH6 diphthamine biosynthesis 6 -0.0458374
IGF1R insulin-like growth factor 1 receptor -0.0422566
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0421946
TMSB10 thymosin beta 10 -0.0419766
FBXL20 F-box and leucine-rich repeat protein 20 -0.0419703
FAM13A family with sequence similarity 13, member A -0.041958
RPL35A ribosomal protein L35a -0.0414539
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0414042
CPED1 cadherin-like and PC-esterase domain containing 1 -0.0375848
RB1CC1 RB1-inducible coiled-coil 1 -0.0343514
NREP neuronal regeneration related protein -0.0340207
RPL38 ribosomal protein L38 -0.0339201
TPT1 tumor protein, translationally-controlled 1 -0.0339199
SLC38A2 solute carrier family 38, member 2 -0.0336135
BCAS3 breast carcinoma amplified sequence 3 -0.033464
RAD51B RAD51 paralog B -0.0333939
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0332853
ANTXR1 anthrax toxin receptor 1 -0.0325348
CADM2 cell adhesion molecule 2 -0.0324408
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0306376
TNRC6B trinucleotide repeat containing 6B -0.0306088
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0305845
PHF3 PHD finger protein 3 -0.0296276
RPLP1 ribosomal protein, large, P1 -0.0294168
MAPK10 mitogen-activated protein kinase 10 -0.0289381
ACTG1 actin gamma 1 -0.0289236
FTL ferritin, light polypeptide -0.0288585
COL3A1 collagen, type III, alpha 1 -0.0286926
CDK19 cyclin-dependent kinase 19 -0.0279536
KLHL24 kelch-like family member 24 -0.0278215
MBNL2 muscleblind-like splicing regulator 2 -0.027608
ZNF292 zinc finger protein 292 -0.027528
MBTD1 mbt domain containing 1 -0.0268371
DIAPH2 diaphanous-related formin 2 -0.0255159
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0245649
GPC5 glypican 5 -0.0240912
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog -0.0235759
ST6GALNAC3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 -0.0232545
SOS1 son of sevenless homolog 1 (Drosophila) -0.0225502
RPS24 ribosomal protein S24 -0.0220634
RPS19 ribosomal protein S19 -0.0220249
AUH AU RNA binding protein/enoyl-CoA hydratase -0.0218513
AUTS2 autism susceptibility candidate 2 -0.0216204
RPL34 ribosomal protein L34 -0.0215409
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0215397
TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) -0.0215215
IFI16 interferon, gamma-inducible protein 16 -0.0211174
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0210284
PTMA prothymosin, alpha -0.0209834
RPS27 ribosomal protein S27 -0.020821
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0207887
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0205479
OGA O-GlcNAcase -0.020479
RPL32 ribosomal protein L32 -0.0203787
KCNIP4 Kv channel interacting protein 4 -0.0203709
NEK7 NIMA-related kinase 7 -0.0201623
RPL19 ribosomal protein L19 -0.0201289
RSF1 remodeling and spacing factor 1 -0.0200931
MIS18BP1 MIS18 binding protein 1 -0.0200646
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0200459
CSDE1 cold shock domain containing E1, RNA-binding -0.0196777
FRMD4A FERM domain containing 4A -0.019638
SCLT1 sodium channel and clathrin linker 1 -0.0195892
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.0193753
TENT5A terminal nucleotidyltransferase 5A -0.0192051
RPS23 ribosomal protein S23 -0.0191378
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0190027
ARID1B AT rich interactive domain 1B (SWI1-like) -0.0187906
FOXN3 forkhead box N3 -0.0187733
CENPF centromere protein F, 350/400kDa -0.018634
NPEPPS aminopeptidase puromycin sensitive -0.0180387
AFMID arylformamidase -0.0179913
RPL31 ribosomal protein L31 -0.0178463
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 -0.0178086
UBXN7 UBX domain protein 7 -0.017471
COL1A1 collagen, type I, alpha 1 -0.017442
PACS1 phosphofurin acidic cluster sorting protein 1 -0.0171336
RPL7 ribosomal protein L7 -0.0170804
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.017008
CDH2 cadherin 2, type 1, N-cadherin (neuronal) -0.0168624
CLNS1A chloride channel, nucleotide-sensitive, 1A -0.016745
ATM ATM serine/threonine kinase -0.0167407
XRN1 5'-3' exoribonuclease 1 -0.0166892
TBX2 T-box 2 -0.0166757
CD36 CD36 molecule (thrombospondin receptor) -0.0166367
NME2 NME/NM23 nucleoside diphosphate kinase 2 -0.0166119
SLC6A15 solute carrier family 6 (neutral amino acid transporter), member 15 -0.016549