Abemaciclib_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Abemaciclib perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Abemaciclib_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
INTS6 integrator complex subunit 6 0.147945
LMO7 LIM domain 7 0.133717
EXT1 exostosin glycosyltransferase 1 0.118806
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.10945
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0920188
HKDC1 hexokinase domain containing 1 0.0893508
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 0.086207
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 0.0857173
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0776728
GCLC glutamate-cysteine ligase, catalytic subunit 0.0721493
MCTP1 multiple C2 domains, transmembrane 1 0.0693358
SMAD3 SMAD family member 3 0.0683424
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.0642986
AKAP13 A kinase (PRKA) anchor protein 13 0.0607205
PDZD8 PDZ domain containing 8 0.0574263
RAB7A RAB7A, member RAS oncogene family 0.0571629
EFNB2 ephrin-B2 0.0563144
FNDC3B fibronectin type III domain containing 3B 0.0520041
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0509439
ASPH aspartate beta-hydroxylase 0.0503734
ANXA2 annexin A2 0.0476717
ZSWIM6 zinc finger, SWIM-type containing 6 0.0467303
ERN1 endoplasmic reticulum to nucleus signaling 1 0.045892
GMDS GDP-mannose 4,6-dehydratase 0.0450904
MAN1A1 mannosidase, alpha, class 1A, member 1 0.0447051
TM4SF19 transmembrane 4 L six family member 19 0.0441849
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0432342
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0427418
FNDC3A fibronectin type III domain containing 3A 0.0424721
TOP1 topoisomerase (DNA) I 0.0418143
NABP1 nucleic acid binding protein 1 0.0410017
ANKRD10 ankyrin repeat domain 10 0.0408361
SHB Src homology 2 domain containing adaptor protein B 0.0406789
MAP7 microtubule-associated protein 7 0.0399134
DST dystonin 0.0390933
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0386255
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0369876
ELOF1 elongation factor 1 homolog (S. cerevisiae) 0.0366286
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0364987
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0361424
PMM2 phosphomannomutase 2 0.0354099
DUSP10 dual specificity phosphatase 10 0.035304
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa 0.0352304
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0350929
RAB10 RAB10, member RAS oncogene family 0.0346566
EPSTI1 epithelial stromal interaction 1 (breast) 0.0339938
RNF213 ring finger protein 213 0.033885
SIPA1L2 signal-induced proliferation-associated 1 like 2 0.0337828
KYNU kynureninase 0.033763
RIGI RNA sensor RIG-I 0.0325759
SND1 staphylococcal nuclease and tudor domain containing 1 0.030942
ARHGEF38 Rho guanine nucleotide exchange factor (GEF) 38 0.0306594
PLEKHM1 pleckstrin homology domain containing, family M (with RUN domain) member 1 0.0299656
PADI1 peptidyl arginine deiminase, type I 0.0298087
BTBD9 BTB (POZ) domain containing 9 0.0296814
MX1 MX dynamin-like GTPase 1 0.0295574
ALCAM activated leukocyte cell adhesion molecule 0.0294731
VMP1 vacuole membrane protein 1 0.0293833
SEC24D SEC24 family member D 0.0292485
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0291487
RFFL ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 0.0288895
GOLGA4 golgin A4 0.0287705
HM13 histocompatibility (minor) 13 0.0285407
CEMIP cell migration inducing protein, hyaluronan binding 0.0281343
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 0.0277849
HOMER1 homer scaffolding protein 1 0.0276298
TNNC1 troponin C type 1 (slow) 0.0276043
UBAP2 ubiquitin associated protein 2 0.0274067
ZNF292 zinc finger protein 292 0.0273667
TMC5 transmembrane channel-like 5 0.0271801
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase 0.0271547
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0266493
JAK1 Janus kinase 1 0.0266212
KIAA1217 KIAA1217 0.0265573
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0264179
COG3 component of oligomeric golgi complex 3 0.0258547
PCCA propionyl CoA carboxylase, alpha polypeptide 0.0257224
FNIP1 folliculin interacting protein 1 0.0254836
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0254672
PLSCR2 phospholipid scramblase 2 0.0253139
FHIT fragile histidine triad 0.0252625
HSPH1 heat shock 105kDa/110kDa protein 1 0.0249691
TPP2 tripeptidyl peptidase II 0.0248811
UCHL3 ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) 0.0244714
LAMA4 laminin, alpha 4 0.0244692
LURAP1L leucine rich adaptor protein 1-like 0.0238325
ZBTB43 zinc finger and BTB domain containing 43 0.0238116
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0235604
SPRED2 sprouty-related, EVH1 domain containing 2 0.0234096
IARS1 isoleucyl-tRNA synthetase 1 0.0232393
YAP1 Yes-associated protein 1 0.0231712
SDC4 syndecan 4 0.0229868
ANKRD17 ankyrin repeat domain 17 0.0228578
ACSL5 acyl-CoA synthetase long-chain family member 5 0.0228464
SEC24A SEC24 family member A 0.0227718
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae) 0.0225594
GOLGB1 golgin B1 0.0224551
DIAPH1 diaphanous-related formin 1 0.0222833
SETX senataxin 0.0222463
POF1B premature ovarian failure, 1B 0.0213407

decreased expression

Symbol Name Standardized Value
ZMYND8 zinc finger, MYND-type containing 8 -0.172067
B2M beta-2-microglobulin -0.162142
PTMA prothymosin, alpha -0.112595
NDRG1 N-myc downstream regulated 1 -0.107532
TPT1 tumor protein, translationally-controlled 1 -0.10215
TXNIP thioredoxin interacting protein -0.0665967
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0661671
LCN2 lipocalin 2 -0.0660264
EZR ezrin -0.0643556
LOC102724023 ES1 protein homolog, mitochondrial -0.0625957
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.0607487
HLA-B major histocompatibility complex, class I, B -0.0594303
PERP PERP, TP53 apoptosis effector -0.0566698
LYZ lysozyme -0.0564441
ZBTB20 zinc finger and BTB domain containing 20 -0.0562823
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0527465
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0525514
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0491454
TSC22D1 TSC22 domain family, member 1 -0.0471679
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 -0.0461826
RPL35A ribosomal protein L35a -0.0453005
RNF149 ring finger protein 149 -0.0449439
PGK1 phosphoglycerate kinase 1 -0.0443905
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0437324
GCC2 GRIP and coiled-coil domain containing 2 -0.0435125
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0433788
WSB1 WD repeat and SOCS box containing 1 -0.0426042
HLA-E major histocompatibility complex, class I, E -0.0425626
EIF1 eukaryotic translation initiation factor 1 -0.0422798
UBR2 ubiquitin protein ligase E3 component n-recognin 2 -0.0419297
RHOBTB3 Rho-related BTB domain containing 3 -0.0417762
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0404927
H1-0 H1.0 linker histone -0.0389238
MT2A metallothionein 2A -0.0387301
MEIS2 Meis homeobox 2 -0.038278
PHF3 PHD finger protein 3 -0.0382085
FTH1 ferritin, heavy polypeptide 1 -0.0371561
DSPP dentin sialophosphoprotein -0.0370932
MBNL2 muscleblind-like splicing regulator 2 -0.0366496
S100A6 S100 calcium binding protein A6 -0.0361479
PTBP3 polypyrimidine tract binding protein 3 -0.0350256
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0349811
CD46 CD46 molecule, complement regulatory protein -0.0344878
WDR45B WD repeat domain 45B -0.0342629
AKAP9 A kinase (PRKA) anchor protein 9 -0.0338496
HLA-A major histocompatibility complex, class I, A -0.0338195
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.0336358
CCNL1 cyclin L1 -0.0335531
BICRAL BICRA like chromatin remodeling complex associated protein -0.0335104
NBR1 neighbor of BRCA1 gene 1 -0.0332806
TMSB10 thymosin beta 10 -0.0331122
KLHL24 kelch-like family member 24 -0.0329041
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0329032
MPHOSPH8 M-phase phosphoprotein 8 -0.0328781
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0328615
NPEPPS aminopeptidase puromycin sensitive -0.0327036
DIAPH3 diaphanous-related formin 3 -0.0325115
ANXA4 annexin A4 -0.0315565
NCOR1 nuclear receptor corepressor 1 -0.0315207
SMC4 structural maintenance of chromosomes 4 -0.031404
OGA O-GlcNAcase -0.0312445
EGR1 early growth response 1 -0.0310589
SBF2 SET binding factor 2 -0.0309876
ACTG1 actin gamma 1 -0.0308659
UBAC2 UBA domain containing 2 -0.0307039
HLA-C major histocompatibility complex, class I, C -0.0303944
UBC ubiquitin C -0.0293968
VDAC1 voltage-dependent anion channel 1 -0.0292199
KLF3 Kruppel-like factor 3 (basic) -0.0291786
SPDYA speedy/RINGO cell cycle regulator family member A -0.0289066
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 -0.0288777
MKI67 marker of proliferation Ki-67 -0.0288128
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 -0.0287988
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.028667
S100P S100 calcium binding protein P -0.0286413
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0286285
EPCAM epithelial cell adhesion molecule -0.0282233
SLC38A1 solute carrier family 38, member 1 -0.0281519
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.027967
JUP junction plakoglobin -0.0279168
KRT19 keratin 19, type I -0.0277924
PKM pyruvate kinase, muscle -0.0277305
MUC20 mucin 20, cell surface associated -0.02751
MUC13 mucin 13, cell surface associated -0.0272389
PTPRF protein tyrosine phosphatase, receptor type, F -0.0268697
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.0266718
ESYT2 extended synaptotagmin-like protein 2 -0.0266592
PTEN phosphatase and tensin homolog -0.0265063
IFI6 interferon, alpha-inducible protein 6 -0.0261204
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0260173
ABHD2 abhydrolase domain containing 2 -0.0260163
SREBF2 sterol regulatory element binding transcription factor 2 -0.0259381
RPLP1 ribosomal protein, large, P1 -0.025895
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0257364
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0257289
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.025606
TMEM62 transmembrane protein 62 -0.0255779
LOC112694756 uncharaterized LOC112694756 -0.0254647
ZNF395 zinc finger protein 395 -0.0248593
UBE2B ubiquitin-conjugating enzyme E2B -0.0248436