Abemaciclib_HS-578T Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Abemaciclib perturbation in HS-578T cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Abemaciclib_HS-578T drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CXCL8 chemokine (C-X-C motif) ligand 8 0.282343
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.238185
CADM1 cell adhesion molecule 1 0.183964
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.172898
TRIO trio Rho guanine nucleotide exchange factor 0.100914
NAMPT nicotinamide phosphoribosyltransferase 0.0987093
NDRG1 N-myc downstream regulated 1 0.0949999
IER3 immediate early response 3 0.0927253
FNDC3B fibronectin type III domain containing 3B 0.0794597
EXT1 exostosin glycosyltransferase 1 0.0776432
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.074733
CDH13 cadherin 13 0.0698073
MRTFA myocardin related transcription factor A 0.0688974
MT2A metallothionein 2A 0.0680534
SOD2 superoxide dismutase 2, mitochondrial 0.0674503
CALR calreticulin 0.0659171
SLC39A14 solute carrier family 39 (zinc transporter), member 14 0.0655742
JARID2 jumonji, AT rich interactive domain 2 0.0639026
MTDH metadherin 0.0630302
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.062597
HILPDA hypoxia inducible lipid droplet-associated 0.0555389
ALCAM activated leukocyte cell adhesion molecule 0.0542094
ADM adrenomedullin 0.0520263
TM4SF1 transmembrane 4 L six family member 1 0.0516432
IL6 interleukin 6 0.0500168
TFG TRK-fused gene 0.0442429
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0427104
GOLGA4 golgin A4 0.0424812
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 0.0424463
VIM vimentin 0.0422225
PTK2 protein tyrosine kinase 2 0.0420586
TRAM1 translocation associated membrane protein 1 0.0419002
FGFR1 fibroblast growth factor receptor 1 0.0407339
RAB1A RAB1A, member RAS oncogene family 0.0404353
HIP1 huntingtin interacting protein 1 0.0402439
RLF rearranged L-myc fusion 0.0399703
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0397043
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0394713
COL1A2 collagen, type I, alpha 2 0.038877
ANKRD11 ankyrin repeat domain 11 0.0378627
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.03729
ELL2 elongation factor, RNA polymerase II, 2 0.0367612
USP3 ubiquitin specific peptidase 3 0.0366624
RND3 Rho family GTPase 3 0.0366485
ZNF292 zinc finger protein 292 0.0364643
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 0.036345
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0355829
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0351603
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0343463
TMSB10 thymosin beta 10 0.0340538
TMEM158 transmembrane protein 158 (gene/pseudogene) 0.0339911
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0339444
RAB2A RAB2A, member RAS oncogene family 0.0336442
PTMA prothymosin, alpha 0.0333417
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0332678
MARCHF6 membrane associated ring-CH-type finger 6 0.0332105
HIPK2 homeodomain interacting protein kinase 2 0.0331678
SP100 SP100 nuclear antigen 0.0328548
RASA2 RAS p21 protein activator 2 0.0320657
RYBP RING1 and YY1 binding protein 0.0320585
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0318864
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0314735
ATP13A3 ATPase type 13A3 0.0312026
EEF2 eukaryotic translation elongation factor 2 0.0311418
QKI QKI, KH domain containing, RNA binding 0.0311025
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0307605
LIMS1 LIM and senescent cell antigen-like domains 1 0.0307486
ARRDC3 arrestin domain containing 3 0.0306674
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 0.0304703
RAB6A RAB6A, member RAS oncogene family 0.0302511
UGCG UDP-glucose ceramide glucosyltransferase 0.0302162
CCNY cyclin Y 0.0301986
SPAG9 sperm associated antigen 9 0.0296039
NAP1L1 nucleosome assembly protein 1-like 1 0.0293802
COPA coatomer protein complex, subunit alpha 0.0292676
HOOK2 hook microtubule-tethering protein 2 0.0291725
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0290142
IRF1 interferon regulatory factor 1 0.0289012
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0288333
MED13L mediator complex subunit 13-like 0.0287081
KHDRBS3 KH domain containing, RNA binding, signal transduction associated 3 0.028218
PDIA6 protein disulfide isomerase family A, member 6 0.0280854
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II 0.0279916
GPBP1 GC-rich promoter binding protein 1 0.0273782
MAP4 microtubule-associated protein 4 0.027377
PNPLA8 patatin-like phospholipase domain containing 8 0.0271616
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0271196
TMEM39A transmembrane protein 39A 0.0268785
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0268476
ESYT2 extended synaptotagmin-like protein 2 0.0267341
PICALM phosphatidylinositol binding clathrin assembly protein 0.02664
TPM4 tropomyosin 4 0.0265178
CANX calnexin 0.0264965
COL3A1 collagen, type III, alpha 1 0.0263943
TRA2A transformer 2 alpha homolog (Drosophila) 0.0263563
GNAS GNAS complex locus 0.0262276
FMNL2 formin-like 2 0.0261825
MACF1 microtubule-actin crosslinking factor 1 0.0261346
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.025926
EIF3E eukaryotic translation initiation factor 3, subunit E 0.0257561

decreased expression

Symbol Name Standardized Value
FN1 fibronectin 1 -0.270039
PSD3 pleckstrin and Sec7 domain containing 3 -0.0776533
COL6A3 collagen, type VI, alpha 3 -0.0756451
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0642323
ZBTB20 zinc finger and BTB domain containing 20 -0.0641608
IGFBP3 insulin-like growth factor binding protein 3 -0.0607827
PRELID2 PRELI domain containing 2 -0.0469015
COL5A1 collagen, type V, alpha 1 -0.0459052
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0456192
DST dystonin -0.0441777
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0427664
HMGA2 high mobility group AT-hook 2 -0.0411037
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0395389
PDE4D phosphodiesterase 4D, cAMP-specific -0.0394265
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0387587
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 -0.0355046
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0326647
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0290902
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0273871
EPHB1 EPH receptor B1 -0.0262462
CNTN5 contactin 5 -0.0258326
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.025549
LTBP1 latent transforming growth factor beta binding protein 1 -0.0252542
LOX lysyl oxidase -0.0249784
POTEF POTE ankyrin domain family, member F -0.0239196
MAP1B microtubule-associated protein 1B -0.0238425
ASPH aspartate beta-hydroxylase -0.0235978
EGFR epidermal growth factor receptor -0.0232044
SMYD3 SET and MYND domain containing 3 -0.022865
TNS3 tensin 3 -0.0225691
ADAM12 ADAM metallopeptidase domain 12 -0.0218326
ATXN1 ataxin 1 -0.0218048
BBS9 Bardet-Biedl syndrome 9 -0.0216938
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.021332
FER fer (fps/fes related) tyrosine kinase -0.0211164
COL6A1 collagen, type VI, alpha 1 -0.0206613
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0205539
FBN1 fibrillin 1 -0.0205261
PIEZO2 piezo-type mechanosensitive ion channel component 2 -0.0201594
TRPS1 trichorhinophalangeal syndrome I -0.0200728
CENPF centromere protein F, 350/400kDa -0.0200218
EXOC4 exocyst complex component 4 -0.0199661
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0198255
SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 -0.0196282
DPYD dihydropyrimidine dehydrogenase -0.0193532
GLIS3 GLIS family zinc finger 3 -0.0190671
NREP neuronal regeneration related protein -0.0189182
VEGFA vascular endothelial growth factor A -0.018717
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0185176
VCL vinculin -0.018493
PRR16 proline rich 16 -0.0183482
PFN1 profilin 1 -0.0182213
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.017341
ANTXR2 anthrax toxin receptor 2 -0.0172575
HMGA1 high mobility group AT-hook 1 -0.0172241
NALF1 NALCN channel auxiliary factor 1 -0.0171405
SBF2 SET binding factor 2 -0.0167567
KLF12 Kruppel-like factor 12 -0.0166809
EBF1 early B-cell factor 1 -0.0166327
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.0165656
NAV1 neuron navigator 1 -0.0164273
ITGA11 integrin, alpha 11 -0.0163655
NKAIN3 Na+/K+ transporting ATPase interacting 3 -0.0163497
MBNL1 muscleblind-like splicing regulator 1 -0.0161582
STAU2 staufen double-stranded RNA binding protein 2 -0.01601
LOC112694756 uncharaterized LOC112694756 -0.0157974
NRG3 neuregulin 3 -0.0157783
KLF7 Kruppel-like factor 7 (ubiquitous) -0.0156938
TENM3 teneurin transmembrane protein 3 -0.0153799
WWTR1 WW domain containing transcription regulator 1 -0.0152982
MBD5 methyl-CpG binding domain protein 5 -0.0152901
KIRREL3 kin of IRRE like 3 (Drosophila) -0.0152019
SCMH1 sex comb on midleg homolog 1 (Drosophila) -0.0148676
CPQ carboxypeptidase Q -0.0148485
JAK2 Janus kinase 2 -0.0147298
MYLK myosin light chain kinase -0.0147027
NRP1 neuropilin 1 -0.0146972
RAD51B RAD51 paralog B -0.0145835
SMAD3 SMAD family member 3 -0.014381
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0143743
PRSS23 protease, serine, 23 -0.0142965
WDR27 WD repeat domain 27 -0.0142872
LAMC1 laminin, gamma 1 (formerly LAMB2) -0.014286
TPM1 tropomyosin 1 (alpha) -0.0142659
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6 -0.0142518
PTPRK protein tyrosine phosphatase, receptor type, K -0.0142372
METTL15 methyltransferase like 15 -0.0141543
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0141424
RANBP17 RAN binding protein 17 -0.0141219
ABLIM3 actin binding LIM protein family, member 3 -0.0140978
BCAS3 breast carcinoma amplified sequence 3 -0.0140634
TAS2R14 taste receptor, type 2, member 14 -0.0139103
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0136178
ACACA acetyl-CoA carboxylase alpha -0.013608
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0135955
BNC2 basonuclin 2 -0.0135248
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0132423
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.0132239
ARID1B AT rich interactive domain 1B (SWI1-like) -0.0131743
UBE2E2 ubiquitin-conjugating enzyme E2E 2 -0.0131472