Abemaciclib_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Abemaciclib perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Abemaciclib_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.271737
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.104811
ZFAND3 zinc finger, AN1-type domain 3 0.103349
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.100946
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0866631
GLS2 glutaminase 2 (liver, mitochondrial) 0.0845914
GOLGA4 golgin A4 0.0743905
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0742982
SAMD4A sterile alpha motif domain containing 4A 0.0691121
IER3 immediate early response 3 0.0679167
COPA coatomer protein complex, subunit alpha 0.0677782
FNDC3B fibronectin type III domain containing 3B 0.0620238
USP36 ubiquitin specific peptidase 36 0.0585503
RAB1A RAB1A, member RAS oncogene family 0.0567165
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.056222
WAC WW domain containing adaptor with coiled-coil 0.056165
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0545037
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0542678
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0516533
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0508427
RPLP1 ribosomal protein, large, P1 0.0506516
MT2A metallothionein 2A 0.0493177
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 0.0473451
TOP1 topoisomerase (DNA) I 0.0464437
MARK3 MAP/microtubule affinity-regulating kinase 3 0.0458059
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0443777
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0428201
ANKRD11 ankyrin repeat domain 11 0.0428114
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0423512
ZEB1 zinc finger E-box binding homeobox 1 0.0419445
TRIO trio Rho guanine nucleotide exchange factor 0.04186
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0417198
RAB7A RAB7A, member RAS oncogene family 0.0416605
ZSWIM6 zinc finger, SWIM-type containing 6 0.0413792
S100A6 S100 calcium binding protein A6 0.0403813
FMNL2 formin-like 2 0.0398738
OLA1 Obg-like ATPase 1 0.03979
BIRC6 baculoviral IAP repeat containing 6 0.0392996
KTN1 kinectin 1 (kinesin receptor) 0.0391184
SOD2 superoxide dismutase 2, mitochondrial 0.0388728
PRRC2C proline-rich coiled-coil 2C 0.0376198
NOP58 NOP58 ribonucleoprotein 0.037274
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0368905
FAM107B family with sequence similarity 107, member B 0.0367051
PUM2 pumilio RNA-binding family member 2 0.0348727
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0348499
ELL2 elongation factor, RNA polymerase II, 2 0.0344474
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) 0.0344325
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0336279
HLA-B major histocompatibility complex, class I, B 0.033609
RBM6 RNA binding motif protein 6 0.0335589
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0334469
MCL1 myeloid cell leukemia 1 0.0332194
TSC22D2 TSC22 domain family, member 2 0.0332152
PTK2 protein tyrosine kinase 2 0.0327748
TM9SF3 transmembrane 9 superfamily member 3 0.0326595
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0326412
ITCH itchy E3 ubiquitin protein ligase 0.0324066
CHD1 chromodomain helicase DNA binding protein 1 0.0322145
MED13 mediator complex subunit 13 0.0316806
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0315065
SENP6 SUMO1/sentrin specific peptidase 6 0.0313087
CFLAR CASP8 and FADD-like apoptosis regulator 0.0312176
NUP98 nucleoporin 98kDa 0.031172
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0309987
RBM39 RNA binding motif protein 39 0.030909
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) 0.030786
RBM25 RNA binding motif protein 25 0.030183
NCKAP1 NCK-associated protein 1 0.0300826
NHSL1 NHS-like 1 0.0300824
PTGES2 prostaglandin E synthase 2 0.0300816
CYTH1 cytohesin 1 0.0299176
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 0.0298627
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0297316
LAMC2 laminin, gamma 2 0.0296857
TRA2A transformer 2 alpha homolog (Drosophila) 0.0296817
MYH9 myosin, heavy chain 9, non-muscle 0.029464
ASCC3 activating signal cointegrator 1 complex subunit 3 0.0294293
PPP4R3A protein phosphatase 4 regulatory subunit 3A 0.0292924
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0292712
FTO fat mass and obesity associated 0.0290968
SRP54 signal recognition particle 54kDa 0.0288843
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0283506
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0282408
CTBP2 C-terminal binding protein 2 0.0278336
RPS4Y1 ribosomal protein S4, Y-linked 1 0.0277002
HSPA8 heat shock 70kDa protein 8 0.027482
IGFBP3 insulin-like growth factor binding protein 3 0.0272321
CAPZB capping protein (actin filament) muscle Z-line, beta 0.0271848
NUMB numb homolog (Drosophila) 0.0267804
FUS FUS RNA binding protein 0.0266655
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0266465
TENT2 terminal nucleotidyltransferase 2 0.0266185
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.0262791
EIF3E eukaryotic translation initiation factor 3, subunit E 0.0262257
ANKRD12 ankyrin repeat domain 12 0.026017
BRD2 bromodomain containing 2 0.0259557
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0259512
PUM1 pumilio RNA-binding family member 1 0.025945
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0259096

decreased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 -0.200151
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.187922
VIM vimentin -0.156269
SLC38A2 solute carrier family 38, member 2 -0.0953858
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0830481
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0786386
AKAP12 A kinase (PRKA) anchor protein 12 -0.0740238
ERBIN erbb2 interacting protein -0.065932
IGF2 insulin-like growth factor 2 -0.0628717
TMSB10 thymosin beta 10 -0.0627052
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0597028
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0554353
MAML3 mastermind-like 3 (Drosophila) -0.0536229
THSD4 thrombospondin, type I, domain containing 4 -0.0500885
GRAMD1B GRAM domain containing 1B -0.0487086
BICC1 BicC family RNA binding protein 1 -0.0485222
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0482255
NQO1 NAD(P)H dehydrogenase, quinone 1 -0.0474596
NEGR1 neuronal growth regulator 1 -0.0461884
PDE4D phosphodiesterase 4D, cAMP-specific -0.0454096
POTEF POTE ankyrin domain family, member F -0.0449682
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0449562
TNRC6B trinucleotide repeat containing 6B -0.0444612
ZFHX3 zinc finger homeobox 3 -0.0434305
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme -0.0428381
FGB fibrinogen beta chain -0.0427077
HDAC9 histone deacetylase 9 -0.0416126
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.040809
TFPI2 tissue factor pathway inhibitor 2 -0.0408055
NTN4 netrin 4 -0.0401521
EDIL3 EGF-like repeats and discoidin I-like domains 3 -0.0396819
MBNL1 muscleblind-like splicing regulator 1 -0.0386999
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0382005
ANKRD28 ankyrin repeat domain 28 -0.0356352
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0340746
TMEM123 transmembrane protein 123 -0.0338087
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0326761
LANCL1 LanC lantibiotic synthetase component C-like 1 (bacterial) -0.0322846
CENPF centromere protein F, 350/400kDa -0.0319874
BABAM2 BRISC and BRCA1 A complex member 2 -0.0318492
TBC1D5 TBC1 domain family, member 5 -0.0310912
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0310386
AHR aryl hydrocarbon receptor -0.0309128
ZBTB20 zinc finger and BTB domain containing 20 -0.0306466
UTRN utrophin -0.0305903
ECT2 epithelial cell transforming 2 -0.0304271
RAD51B RAD51 paralog B -0.0302795
FOXP1 forkhead box P1 -0.0290251
STC1 stanniocalcin 1 -0.0289279
FBXL20 F-box and leucine-rich repeat protein 20 -0.0287859
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.0277406
PRR16 proline rich 16 -0.0274738
PAWR PRKC, apoptosis, WT1, regulator -0.0273959
THBS1 thrombospondin 1 -0.0273051
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0272874
ADGRG6 adhesion G protein-coupled receptor G6 -0.0272603
PTP4A1 protein tyrosine phosphatase type IVA, member 1 -0.0270006
VDAC1 voltage-dependent anion channel 1 -0.0259896
NFIA nuclear factor I/A -0.0259406
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.025364
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0251648
NRG1 neuregulin 1 -0.0249258
AKAP13 A kinase (PRKA) anchor protein 13 -0.0249105
YY1 YY1 transcription factor -0.024796
PTMA prothymosin, alpha -0.0242588
NCEH1 neutral cholesterol ester hydrolase 1 -0.0238635
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0236251
IGFBP4 insulin-like growth factor binding protein 4 -0.0235361
DDAH1 dimethylarginine dimethylaminohydrolase 1 -0.0235106
HMGA1 high mobility group AT-hook 1 -0.0233832
FGG fibrinogen gamma chain -0.0230308
DOCK5 dedicator of cytokinesis 5 -0.0229431
RAD21 RAD21 homolog (S. pombe) -0.0228379
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.02237
TPX2 TPX2, microtubule-associated -0.0223356
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) -0.0223074
TPM4 tropomyosin 4 -0.0220028
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 -0.0218884
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0216505
EGR1 early growth response 1 -0.0214388
ARHGAP29 Rho GTPase activating protein 29 -0.021416
YBX3 Y box binding protein 3 -0.0212923
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 -0.021202
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5 -0.0211133
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0207191
KLF6 Kruppel-like factor 6 -0.020695
SLC35F3 solute carrier family 35, member F3 -0.0205096
ATXN3 ataxin 3 -0.019803
MYOF myoferlin -0.0197868
MORF4L1 mortality factor 4 like 1 -0.0197645
TAGLN2 transgelin 2 -0.0197301
BIRC3 baculoviral IAP repeat containing 3 -0.01935
DPYSL2 dihydropyrimidinase-like 2 -0.0192976
MKI67 marker of proliferation Ki-67 -0.019288
LAPTM4A lysosomal protein transmembrane 4 alpha -0.0187897
RNF213 ring finger protein 213 -0.018706
EXOC4 exocyst complex component 4 -0.0186516
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.0182866
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0180797
CHN1 chimerin 1 -0.0180708