Abemaciclib_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Abemaciclib perturbation in SNU-1 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Abemaciclib_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
BMP2K BMP2 inducible kinase 0.087708
DLG1 discs, large homolog 1 (Drosophila) 0.0543025
HSPA8 heat shock 70kDa protein 8 0.0450385
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0446908
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.040506
CTBP2 C-terminal binding protein 2 0.0404348
SLC7A6 solute carrier family 7 (amino acid transporter light chain, y+L system), member 6 0.0380498
PDE4D phosphodiesterase 4D, cAMP-specific 0.0376657
CARS1 cysteinyl-tRNA synthetase 1 0.0319128
SRSF1 serine/arginine-rich splicing factor 1 0.029644
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0295519
TULP4 tubby like protein 4 0.0294308
TMEM181 transmembrane protein 181 0.0293393
TASOR2 transcription activation suppressor family member 2 0.0285947
STIP1 stress-induced phosphoprotein 1 0.028511
FNDC3B fibronectin type III domain containing 3B 0.0279211
ANXA1 annexin A1 0.0277672
CPNE1 copine I 0.0276918
ELOVL5 ELOVL fatty acid elongase 5 0.0272258
VPS50 VPS50 subunit of EARP/GARPII complex 0.0272145
CREB3L2 cAMP responsive element binding protein 3-like 2 0.0268643
RIOX2 ribosomal oxygenase 2 0.0258645
ZSCAN5A zinc finger and SCAN domain containing 5A 0.0258291
EMP1 epithelial membrane protein 1 0.025738
JADE1 jade family PHD finger 1 0.0253274
TTC23 tetratricopeptide repeat domain 23 0.0252767
EFNA5 ephrin-A5 0.0251816
DNAJC10 DnaJ (Hsp40) homolog, subfamily C, member 10 0.0251354
IFRD1 interferon-related developmental regulator 1 0.0248653
AP2A1 adaptor-related protein complex 2, alpha 1 subunit 0.0248528
AKAP7 A kinase (PRKA) anchor protein 7 0.02473
TMCO3 transmembrane and coiled-coil domains 3 0.0246847
IL13RA1 interleukin 13 receptor, alpha 1 0.0244031
TXLNA taxilin alpha 0.0242054
FLNB filamin B, beta 0.0239743
ARGLU1 arginine and glutamate rich 1 0.0238992
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) 0.0237966
RAB10 RAB10, member RAS oncogene family 0.0237376
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0236398
ZMYM1 zinc finger, MYM-type 1 0.0235625
GNG12 guanine nucleotide binding protein (G protein), gamma 12 0.0233376
DST dystonin 0.0232613
PDS5B PDS5 cohesin associated factor B 0.0232287
PSMF1 proteasome (prosome, macropain) inhibitor subunit 1 (PI31) 0.0231306
ARHGEF11 Rho guanine nucleotide exchange factor (GEF) 11 0.0226225
GDI2 GDP dissociation inhibitor 2 0.0225569
CDK8 cyclin-dependent kinase 8 0.0224214
EHMT1 euchromatic histone-lysine N-methyltransferase 1 0.0223076
EIF4E2 eukaryotic translation initiation factor 4E family member 2 0.0221779
HMGA1 high mobility group AT-hook 1 0.0217906
SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 0.0216865
VIPR1 vasoactive intestinal peptide receptor 1 0.0216821
RNGTT RNA guanylyltransferase and 5'-phosphatase 0.0216467
SMG6 SMG6 nonsense mediated mRNA decay factor 0.0215843
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0213096
MAPKAP1 mitogen-activated protein kinase associated protein 1 0.0211408
ZSWIM5 zinc finger, SWIM-type containing 5 0.021124
ARHGAP32 Rho GTPase activating protein 32 0.0209443
ANKRD11 ankyrin repeat domain 11 0.0207208
RPTOR regulatory associated protein of MTOR, complex 1 0.0204508
SLC25A13 solute carrier family 25 (aspartate/glutamate carrier), member 13 0.0203184
NIN ninein (GSK3B interacting protein) 0.0199794
STAM2 signal transducing adaptor molecule (SH3 domain and ITAM motif) 2 0.0199773
IST1 increased sodium tolerance 1 homolog (yeast) 0.0199447
SPPL3 signal peptide peptidase like 3 0.0197047
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) 0.019592
MAP3K14 mitogen-activated protein kinase kinase kinase 14 0.0195214
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.0192736
SCFD2 sec1 family domain containing 2 0.0192722
EXOC2 exocyst complex component 2 0.0192118
NKTR natural killer cell triggering receptor 0.0191652
TRIM5 tripartite motif containing 5 0.0190765
NAP1L4 nucleosome assembly protein 1-like 4 0.0190682
TRIM25 tripartite motif containing 25 0.0190056
XRN2 5'-3' exoribonuclease 2 0.0189262
RASAL2 RAS protein activator like 2 0.0188155
NRIP1 nuclear receptor interacting protein 1 0.018397
MIPOL1 mirror-image polydactyly 1 0.0183748
DIAPH1 diaphanous-related formin 1 0.0183687
ERCC6L2 excision repair cross-complementation group 6-like 2 0.0182503
TBK1 TANK-binding kinase 1 0.0181619
GOLM2 golgi membrane protein 2 0.0181422
HM13 histocompatibility (minor) 13 0.0180634
DOCK5 dedicator of cytokinesis 5 0.018057
ARF4 ADP-ribosylation factor 4 0.0180212
ANXA2 annexin A2 0.0180014
S100A11 S100 calcium binding protein A11 0.0178291
TNRC6A trinucleotide repeat containing 6A 0.0177132
FOXJ3 forkhead box J3 0.0175389
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0175176
UBE2V1 ubiquitin-conjugating enzyme E2 variant 1 0.0173361
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0173099
USP15 ubiquitin specific peptidase 15 0.016894
UPF3A UPF3 regulator of nonsense transcripts homolog A (yeast) 0.0167375
TTC17 tetratricopeptide repeat domain 17 0.0166195
MAP3K13 mitogen-activated protein kinase kinase kinase 13 0.0165997
ZNF608 zinc finger protein 608 0.016447
MARK2 MAP/microtubule affinity-regulating kinase 2 0.0164363
SS18 synovial sarcoma translocation, chromosome 18 0.0164271
IQCJ IQ motif containing J 0.0164105

decreased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha -0.160472
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.137042
VCL vinculin -0.101877
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.101474
ADAM10 ADAM metallopeptidase domain 10 -0.09711
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0926908
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0793071
CPED1 cadherin-like and PC-esterase domain containing 1 -0.0773385
RPS6 ribosomal protein S6 -0.0759687
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0672754
FOXP1 forkhead box P1 -0.0639263
LDHA lactate dehydrogenase A -0.061038
TXNRD1 thioredoxin reductase 1 -0.0595271
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0589097
SLC38A2 solute carrier family 38, member 2 -0.0551118
RBM39 RNA binding motif protein 39 -0.0546908
EEF2 eukaryotic translation elongation factor 2 -0.0534813
SOX6 SRY (sex determining region Y)-box 6 -0.0528058
RPL11 ribosomal protein L11 -0.0518149
TMSB4X thymosin beta 4, X-linked -0.0514117
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0506964
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0474073
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0466034
NBEA neurobeachin -0.0465115
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.0449054
TJP1 tight junction protein 1 -0.0446001
S100A6 S100 calcium binding protein A6 -0.0421345
AHNAK AHNAK nucleoprotein -0.0420753
RPL35A ribosomal protein L35a -0.0414139
PGK1 phosphoglycerate kinase 1 -0.0410859
BMP10 bone morphogenetic protein 10 -0.0407311
RPL12 ribosomal protein L12 -0.0403085
GOLGA4 golgin A4 -0.0400409
B2M beta-2-microglobulin -0.0399712
RPL31 ribosomal protein L31 -0.0399653
NFIA nuclear factor I/A -0.0399383
LOC112694756 uncharaterized LOC112694756 -0.0389844
RPS12 ribosomal protein S12 -0.0386012
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0384995
RPLP1 ribosomal protein, large, P1 -0.037352
RPL26 ribosomal protein L26 -0.0355422
SMC3 structural maintenance of chromosomes 3 -0.0354179
ENO1 enolase 1, (alpha) -0.0352518
PKM pyruvate kinase, muscle -0.0352479
RPS23 ribosomal protein S23 -0.0349548
RPLP0 ribosomal protein, large, P0 -0.0348184
RPS19 ribosomal protein S19 -0.0344303
NAP1L1 nucleosome assembly protein 1-like 1 -0.033552
RPS13 ribosomal protein S13 -0.0330615
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0330158
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0328308
TPT1 tumor protein, translationally-controlled 1 -0.032666
GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 -0.0325111
EVI5 ecotropic viral integration site 5 -0.0323781
DPYD dihydropyrimidine dehydrogenase -0.0323088
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 -0.0322617
SSBP2 single-stranded DNA binding protein 2 -0.0322177
CACNB4 calcium channel, voltage-dependent, beta 4 subunit -0.0317222
SQSTM1 sequestosome 1 -0.0314799
CAMTA1 calmodulin binding transcription activator 1 -0.0305143
PFN1 profilin 1 -0.0302378
DUSP4 dual specificity phosphatase 4 -0.0296841
CENPF centromere protein F, 350/400kDa -0.0293418
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0291543
NPAS2 neuronal PAS domain protein 2 -0.0289715
ACTG1 actin gamma 1 -0.0286108
WSB1 WD repeat and SOCS box containing 1 -0.028532
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0275913
POTEF POTE ankyrin domain family, member F -0.0275725
ECT2 epithelial cell transforming 2 -0.0275566
ZMYM2 zinc finger, MYM-type 2 -0.0272795
ZEB1 zinc finger E-box binding homeobox 1 -0.0271833
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0267826
SRRM2 serine/arginine repetitive matrix 2 -0.0266225
PNISR PNN-interacting serine/arginine-rich protein -0.0266194
ZBTB20 zinc finger and BTB domain containing 20 -0.0265628
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0264766
RPL7A ribosomal protein L7a -0.0264121
RPS3 ribosomal protein S3 -0.0262475
AKAP9 A kinase (PRKA) anchor protein 9 -0.0257253
CD47 CD47 molecule -0.0255959
SET SET nuclear proto-oncogene -0.0254501
RPL37A ribosomal protein L37a -0.0251935
GARS1 glycyl-tRNA synthetase 1 -0.0249708
RPL27A ribosomal protein L27a -0.0249053
RPS25 ribosomal protein S25 -0.0248617
CANX calnexin -0.0243779
CSDE1 cold shock domain containing E1, RNA-binding -0.0243647
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0242414
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0241912
RPLP2 ribosomal protein, large, P2 -0.0239948
SEPTIN7 septin 7 -0.0239612
TRERF1 transcriptional regulating factor 1 -0.0237847
ARL4C ADP-ribosylation factor-like 4C -0.023724
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like -0.0231978
RB1CC1 RB1-inducible coiled-coil 1 -0.0231776
TNRC6B trinucleotide repeat containing 6B -0.023162
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0229276
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0228985
RPL36 ribosomal protein L36 -0.0228934