Abiraterone acetate_RKO Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Abiraterone acetate perturbation in RKO cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Abiraterone acetate_RKO drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LAMB3 laminin, beta 3 0.0846233
FLNB filamin B, beta 0.0622176
ARHGAP22 Rho GTPase activating protein 22 0.0542667
SRRM2 serine/arginine repetitive matrix 2 0.0490699
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0458569
NAV2 neuron navigator 2 0.0439959
EEF2 eukaryotic translation elongation factor 2 0.0433895
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0430557
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.042391
FRMD6 FERM domain containing 6 0.0414454
GFPT2 glutamine-fructose-6-phosphate transaminase 2 0.0400622
EIF4H eukaryotic translation initiation factor 4H 0.0392512
MCL1 myeloid cell leukemia 1 0.0386265
SAMD12 sterile alpha motif domain containing 12 0.0351347
MYH9 myosin, heavy chain 9, non-muscle 0.0348492
PBX3 pre-B-cell leukemia homeobox 3 0.0344856
DENND1A DENN/MADD domain containing 1A 0.0335252
HMGA2 high mobility group AT-hook 2 0.0334314
FLNA filamin A, alpha 0.032354
PHC2 polyhomeotic homolog 2 (Drosophila) 0.0319612
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0317635
HSPA8 heat shock 70kDa protein 8 0.0312754
RPL3 ribosomal protein L3 0.0307513
CEP250 centrosomal protein 250kDa 0.0306835
PRRC2A proline-rich coiled-coil 2A 0.0293724
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.029045
NPC1 Niemann-Pick disease, type C1 0.0287208
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0286951
MACF1 microtubule-actin crosslinking factor 1 0.0279682
LARGE1 LARGE xylosyl- and glucuronyltransferase 1 0.0276091
COL27A1 collagen, type XXVII, alpha 1 0.0272488
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0272196
TPM3 tropomyosin 3 0.0270868
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa) 0.0270628
MSI2 musashi RNA-binding protein 2 0.0264059
CRACD capping protein inhibiting regulator of actin dynamics 0.0256384
AGO2 argonaute RISC catalytic component 2 0.0255788
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0255635
NDRG1 N-myc downstream regulated 1 0.0251517
SMTN smoothelin 0.0249587
CDK6 cyclin-dependent kinase 6 0.0233822
STX3 syntaxin 3 0.0232831
SURF4 surfeit 4 0.0231386
SLC44A1 solute carrier family 44 (choline transporter), member 1 0.0229894
RAD51B RAD51 paralog B 0.0228862
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 0.0221766
KMT2E lysine (K)-specific methyltransferase 2E 0.0217252
GALNT18 polypeptide N-acetylgalactosaminyltransferase 18 0.0214001
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.021104
PRRC2B proline-rich coiled-coil 2B 0.0209094
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0206734
SLC25A6 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 0.0205909
HELZ2 helicase with zinc finger 2, transcriptional coactivator 0.020577
MTAP methylthioadenosine phosphorylase 0.0205642
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.0203612
GSE1 Gse1 coiled-coil protein 0.0203553
NUMA1 nuclear mitotic apparatus protein 1 0.0199283
PLEC plectin 0.0198355
DST dystonin 0.019705
BAZ1B bromodomain adjacent to zinc finger domain, 1B 0.0196672
WWC2 WW and C2 domain containing 2 0.0192977
TTR transthyretin 0.0191796
DOCK1 dedicator of cytokinesis 1 0.0191755
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0189842
SLC38A1 solute carrier family 38, member 1 0.0187101
ALCAM activated leukocyte cell adhesion molecule 0.0185529
FRMD4A FERM domain containing 4A 0.0185176
ENO2 enolase 2 (gamma, neuronal) 0.0183945
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0182925
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0182452
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0182229
ATP11A ATPase, class VI, type 11A 0.0181123
MKI67 marker of proliferation Ki-67 0.0178668
ANK2 ankyrin 2, neuronal 0.0176688
CTSL cathepsin L 0.0176259
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.0175734
PLSCR1 phospholipid scramblase 1 0.017523
TMBIM6 transmembrane BAX inhibitor motif containing 6 0.0174567
CUX1 cut-like homeobox 1 0.0172859
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0172169
AKAP12 A kinase (PRKA) anchor protein 12 0.0167959
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.016694
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0166737
CMIP c-Maf inducing protein 0.0165619
RNF213 ring finger protein 213 0.0164932
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0164662
LPP LIM domain containing preferred translocation partner in lipoma 0.016321
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.0162387
ABR active BCR-related 0.016052
LIMA1 LIM domain and actin binding 1 0.0160256
EIF2S3 eukaryotic translation initiation factor 2, subunit 3 gamma, 52kDa 0.0159925
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 0.0159327
RIGI RNA sensor RIG-I 0.0158557
CSNK1G3 casein kinase 1, gamma 3 0.0157975
HDLBP high density lipoprotein binding protein 0.0156799
PRDM16 PR domain containing 16 0.0155523
PLCG1 phospholipase C, gamma 1 0.0155233
RAB3IP RAB3A interacting protein 0.0154938
CTIF CBP80/20-dependent translation initiation factor 0.0154323
EFNB2 ephrin-B2 0.0154127

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.224367
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.151978
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.142466
ACTG1 actin gamma 1 -0.115599
UBC ubiquitin C -0.107188
RPS6 ribosomal protein S6 -0.102522
POTEF POTE ankyrin domain family, member F -0.0917819
MT2A metallothionein 2A -0.0821459
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0804518
RPS8 ribosomal protein S8 -0.0664329
STC1 stanniocalcin 1 -0.066257
RPS27A ribosomal protein S27a -0.0644366
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0628968
RPL23 ribosomal protein L23 -0.0601148
RPL8 ribosomal protein L8 -0.0594116
RPL12 ribosomal protein L12 -0.0583367
RPL7A ribosomal protein L7a -0.0568383
RPLP2 ribosomal protein, large, P2 -0.0554153
EEF1G eukaryotic translation elongation factor 1 gamma -0.0535788
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0498224
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0486755
CAPZA1 capping protein (actin filament) muscle Z-line, alpha 1 -0.0483532
TMSB10 thymosin beta 10 -0.047942
RPLP1 ribosomal protein, large, P1 -0.047797
HMGA1 high mobility group AT-hook 1 -0.0474104
RPL9 ribosomal protein L9 -0.0467707
SETD5 SET domain containing 5 -0.0453454
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0452147
RPL7 ribosomal protein L7 -0.0439971
RPL28 ribosomal protein L28 -0.0436456
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0435091
LDHA lactate dehydrogenase A -0.043456
RAD21 RAD21 homolog (S. pombe) -0.0434097
RPS19 ribosomal protein S19 -0.0433016
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0429253
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0415274
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0414037
RPLP0 ribosomal protein, large, P0 -0.0404061
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0391437
TPT1 tumor protein, translationally-controlled 1 -0.0391412
PTMA prothymosin, alpha -0.0389714
CREB5 cAMP responsive element binding protein 5 -0.0388064
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0387269
ZFR zinc finger RNA binding protein -0.0367647
FTL ferritin, light polypeptide -0.0366942
RPL32 ribosomal protein L32 -0.036501
JMJD1C jumonji domain containing 1C -0.0363245
TM9SF3 transmembrane 9 superfamily member 3 -0.0361173
STAU1 staufen double-stranded RNA binding protein 1 -0.0358851
TMEM87A transmembrane protein 87A -0.0357567
RPS11 ribosomal protein S11 -0.0355661
ZMYM2 zinc finger, MYM-type 2 -0.035162
RPS5 ribosomal protein S5 -0.0349532
JUN jun proto-oncogene -0.0347716
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0346756
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0346606
SBF2 SET binding factor 2 -0.0345363
PGK1 phosphoglycerate kinase 1 -0.0343411
PTK2 protein tyrosine kinase 2 -0.0338468
CDK17 cyclin-dependent kinase 17 -0.0336578
TPD52 tumor protein D52 -0.0333258
RAP1B RAP1B, member of RAS oncogene family -0.0333231
TOP1 topoisomerase (DNA) I -0.033042
NIPBL Nipped-B homolog (Drosophila) -0.0325579
RPS23 ribosomal protein S23 -0.0324487
RPS25 ribosomal protein S25 -0.032357
RBM39 RNA binding motif protein 39 -0.0313865
WAC WW domain containing adaptor with coiled-coil -0.0312322
BRD4 bromodomain containing 4 -0.0310819
USP15 ubiquitin specific peptidase 15 -0.0309551
PIAS1 protein inhibitor of activated STAT, 1 -0.0308803
RASA2 RAS p21 protein activator 2 -0.0306281
PHIP pleckstrin homology domain interacting protein -0.0305775
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0304427
RPL19 ribosomal protein L19 -0.0304162
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0303174
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0301921
YAP1 Yes-associated protein 1 -0.0300783
PTBP3 polypyrimidine tract binding protein 3 -0.0298111
RPL30 ribosomal protein L30 -0.0297333
PSME4 proteasome (prosome, macropain) activator subunit 4 -0.029727
CHCHD2 coiled-coil-helix-coiled-coil-helix domain containing 2 -0.0297054
PDIA6 protein disulfide isomerase family A, member 6 -0.0293075
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0291502
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0291352
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.029125
ZEB1 zinc finger E-box binding homeobox 1 -0.0291061
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform -0.029084
MON2 MON2 homolog (S. cerevisiae) -0.02903
GOLGA4 golgin A4 -0.0288828
DENND4A DENN/MADD domain containing 4A -0.0288626
RPS16 ribosomal protein S16 -0.0288124
RPS15 ribosomal protein S15 -0.0287747
AHNAK AHNAK nucleoprotein -0.0286623
PTBP2 polypyrimidine tract binding protein 2 -0.0284945
DIAPH3 diaphanous-related formin 3 -0.028455
RB1CC1 RB1-inducible coiled-coil 1 -0.0283871
RPL5 ribosomal protein L5 -0.0281702
USP34 ubiquitin specific peptidase 34 -0.0281409
COG5 component of oligomeric golgi complex 5 -0.0280387