Abiraterone acetate_SK-MEL-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Abiraterone acetate perturbation in SK-MEL-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Abiraterone acetate_SK-MEL-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.0986699
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0661682
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 0.0288815
LOC112694756 uncharaterized LOC112694756 0.0279768
LINGO2 leucine rich repeat and Ig domain containing 2 0.0276394
PRELID2 PRELI domain containing 2 0.0257897
CENPF centromere protein F, 350/400kDa 0.02438
PLEC plectin 0.0232833
TRIO trio Rho guanine nucleotide exchange factor 0.0228399
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.022318
MSN moesin 0.0208258
FLNA filamin A, alpha 0.0201696
SRRM2 serine/arginine repetitive matrix 2 0.0201531
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0181362
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0179843
RPL3 ribosomal protein L3 0.0177496
KTN1 kinectin 1 (kinesin receptor) 0.0176542
NAV2 neuron navigator 2 0.017501
ZNF697 zinc finger protein 697 0.0169387
EIF4H eukaryotic translation initiation factor 4H 0.0168757
MT2A metallothionein 2A 0.0167689
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 0.0164254
FNIP1 folliculin interacting protein 1 0.0160678
KDM4C lysine (K)-specific demethylase 4C 0.0159674
CAMTA1 calmodulin binding transcription activator 1 0.0159011
CLIP4 CAP-GLY domain containing linker protein family, member 4 0.0156268
DENND1A DENN/MADD domain containing 1A 0.0153953
FHIT fragile histidine triad 0.0153338
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0152566
LUC7L2 LUC7-like 2 (S. cerevisiae) 0.0151878
AFDN afadin, adherens junction formation factor 0.0145384
BRAF B-Raf proto-oncogene, serine/threonine kinase 0.0145362
DIAPH3 diaphanous-related formin 3 0.0144894
PRRC2A proline-rich coiled-coil 2A 0.0144431
RASAL2 RAS protein activator like 2 0.0139931
KPNA4 karyopherin alpha 4 (importin alpha 3) 0.0139198
ZCCHC7 zinc finger, CCHC domain containing 7 0.0137684
RFX3 regulatory factor X, 3 (influences HLA class II expression) 0.0137178
TENM1 teneurin transmembrane protein 1 0.0136748
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0130535
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0129705
NGLY1 N-glycanase 1 0.0129614
ATP13A3 ATPase type 13A3 0.0129124
PTPN1 protein tyrosine phosphatase, non-receptor type 1 0.0128915
SND1 staphylococcal nuclease and tudor domain containing 1 0.0127726
CHD1 chromodomain helicase DNA binding protein 1 0.0127114
BIRC6 baculoviral IAP repeat containing 6 0.0126503
ZDHHC17 zinc finger, DHHC-type containing 17 0.012599
PPP2R3A protein phosphatase 2, regulatory subunit B'', alpha 0.0125752
EP300 E1A binding protein p300 0.0123907
MAPK8 mitogen-activated protein kinase 8 0.0122484
GOLGA4 golgin A4 0.0122243
PUM3 pumilio RNA binding family member 3 0.0121952
GALNT18 polypeptide N-acetylgalactosaminyltransferase 18 0.0119678
CSNK1E casein kinase 1, epsilon 0.0119345
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0118588
ZFYVE16 zinc finger, FYVE domain containing 16 0.0118477
AGO2 argonaute RISC catalytic component 2 0.0118116
NDUFA10 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa 0.0116699
ANKIB1 ankyrin repeat and IBR domain containing 1 0.0116524
CARD16 caspase recruitment domain family, member 16 0.0116375
MED13 mediator complex subunit 13 0.0115052
HDLBP high density lipoprotein binding protein 0.0114903
GLS2 glutaminase 2 (liver, mitochondrial) 0.0113288
EXOC4 exocyst complex component 4 0.0112335
SUCO SUN domain containing ossification factor 0.0111391
COA1 cytochrome c oxidase assembly factor 1 homolog (S. cerevisiae) 0.011139
UPF2 UPF2 regulator of nonsense transcripts homolog (yeast) 0.0110936
ZNF644 zinc finger protein 644 0.0110809
SMC5 structural maintenance of chromosomes 5 0.0109994
FAM219A family with sequence similarity 219, member A 0.0108091
HLA-C major histocompatibility complex, class I, C 0.0107944
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 0.0107925
XPNPEP3 X-prolyl aminopeptidase 3, mitochondrial 0.0107436
RCOR1 REST corepressor 1 0.0107316
RBM26 RNA binding motif protein 26 0.0104733
METTL15 methyltransferase like 15 0.0104657
FTH1 ferritin, heavy polypeptide 1 0.0104467
FAF2 Fas associated factor family member 2 0.010247
MNAT1 MNAT CDK-activating kinase assembly factor 1 0.0102147
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0102026
KLHL29 kelch-like family member 29 0.0102012
TFDP2 transcription factor Dp-2 (E2F dimerization partner 2) 0.0101422
MTMR1 myotubularin related protein 1 0.0101083
PRRC2B proline-rich coiled-coil 2B 0.00999408
FBXW7 F-box and WD repeat domain containing 7, E3 ubiquitin protein ligase 0.00996089
OSBPL10 oxysterol binding protein-like 10 0.00967157
UBE2G2 ubiquitin-conjugating enzyme E2G 2 0.00965904
MEGF6 multiple EGF-like-domains 6 0.0096502
SLC30A7 solute carrier family 30 (zinc transporter), member 7 0.00958775
ATRN attractin 0.00958446
HERPUD2 HERPUD family member 2 0.00957352
PNN pinin, desmosome associated protein 0.0095728
RTN4 reticulon 4 0.00954913
YEATS2 YEATS domain containing 2 0.00951026
SP3 Sp3 transcription factor 0.00942797
PYGB phosphorylase, glycogen; brain 0.00938552
SERGEF secretion regulating guanine nucleotide exchange factor 0.00935929
ARID1A AT rich interactive domain 1A (SWI-like) 0.00931448
CNOT6 CCR4-NOT transcription complex, subunit 6 0.00927185

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.140018
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0839303
PTMA prothymosin, alpha -0.077543
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0723169
NLGN1 neuroligin 1 -0.0695684
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.067587
ENO1 enolase 1, (alpha) -0.0660765
SQSTM1 sequestosome 1 -0.0545077
VIM vimentin -0.0530709
PKM pyruvate kinase, muscle -0.0519581
IFI6 interferon, alpha-inducible protein 6 -0.0518603
FRMD4A FERM domain containing 4A -0.0479549
NRG3 neuregulin 3 -0.0459863
PGK1 phosphoglycerate kinase 1 -0.0437078
FTL ferritin, light polypeptide -0.0432529
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.0429104
SFTPA2 surfactant protein A2 -0.0427905
TPT1 tumor protein, translationally-controlled 1 -0.0403347
NAP1L1 nucleosome assembly protein 1-like 1 -0.0401774
B2M beta-2-microglobulin -0.0399279
RPS3 ribosomal protein S3 -0.0399065
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0395937
RPL35A ribosomal protein L35a -0.038576
PMEL premelanosome protein -0.0345022
TMSB10 thymosin beta 10 -0.0343677
NAMPT nicotinamide phosphoribosyltransferase -0.0342514
CCND1 cyclin D1 -0.0337687
HLA-E major histocompatibility complex, class I, E -0.0334789
IER3 immediate early response 3 -0.0333945
RPS24 ribosomal protein S24 -0.0331712
IFI16 interferon, gamma-inducible protein 16 -0.0330352
HLA-B major histocompatibility complex, class I, B -0.0329298
TAX1BP1 Tax1 (human T-cell leukemia virus type I) binding protein 1 -0.0326704
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0318204
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0317454
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0300533
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0294359
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) -0.0294176
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0291911
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0288534
IGF1R insulin-like growth factor 1 receptor -0.028268
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0277764
SP100 SP100 nuclear antigen -0.0270541
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0269022
RPL31 ribosomal protein L31 -0.0268722
RPS23 ribosomal protein S23 -0.0266421
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0265619
IFIH1 interferon induced with helicase C domain 1 -0.0261086
RPLP2 ribosomal protein, large, P2 -0.0260563
RPL38 ribosomal protein L38 -0.0259627
RNF213 ring finger protein 213 -0.0258692
LITAF lipopolysaccharide-induced TNF factor -0.0257573
RPS8 ribosomal protein S8 -0.0256763
PRAME preferentially expressed antigen in melanoma -0.0255387
KDM3A lysine (K)-specific demethylase 3A -0.0254612
RPL11 ribosomal protein L11 -0.0254141
UBC ubiquitin C -0.0253882
CTSD cathepsin D -0.0249217
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0243673
ENO2 enolase 2 (gamma, neuronal) -0.0240309
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0238642
RPL19 ribosomal protein L19 -0.0238005
KMT2E lysine (K)-specific methyltransferase 2E -0.0235885
ZMYND8 zinc finger, MYND-type containing 8 -0.0231335
RPS25 ribosomal protein S25 -0.0229906
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0229329
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0229213
CANX calnexin -0.0227576
RPS29 ribosomal protein S29 -0.0227147
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0224203
ERC2 ELKS/RAB6-interacting/CAST family member 2 -0.0222149
TM4SF1 transmembrane 4 L six family member 1 -0.0220924
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.022085
RPS14 ribosomal protein S14 -0.0220347
CTSB cathepsin B -0.0220049
LSAMP limbic system-associated membrane protein -0.0219307
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 -0.0218889
RAB7A RAB7A, member RAS oncogene family -0.0217218
RPS13 ribosomal protein S13 -0.0215041
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.021456
FUS FUS RNA binding protein -0.0212059
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.0208636
IFITM3 interferon induced transmembrane protein 3 -0.0208106
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0206665
CCDC47 coiled-coil domain containing 47 -0.020394
RPL28 ribosomal protein L28 -0.0203223
RHOBTB3 Rho-related BTB domain containing 3 -0.0202568
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0202048
POLR2F polymerase (RNA) II (DNA directed) polypeptide F -0.0201044
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0197247
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.0195833
MORF4L2 mortality factor 4 like 2 -0.0190266
RPL37A ribosomal protein L37a -0.018872
PTP4A2 protein tyrosine phosphatase type IVA, member 2 -0.0186813
RPLP1 ribosomal protein, large, P1 -0.018508
APOD apolipoprotein D -0.0184696
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 -0.0183992
NDRG1 N-myc downstream regulated 1 -0.0183898
GNAS GNAS complex locus -0.0182953
RPS15 ribosomal protein S15 -0.018093