Adagrasib_HS-578T Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Adagrasib perturbation in HS-578T cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Adagrasib_HS-578T drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
VEGFA vascular endothelial growth factor A 0.279686
COL6A3 collagen, type VI, alpha 3 0.207706
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.185671
MYH9 myosin, heavy chain 9, non-muscle 0.176345
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.155879
CALR calreticulin 0.131651
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.128691
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.120687
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0875764
ENO1 enolase 1, (alpha) 0.0777625
UBC ubiquitin C 0.0748043
LDHA lactate dehydrogenase A 0.0709609
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0686762
EEF2 eukaryotic translation elongation factor 2 0.0685378
AHNAK AHNAK nucleoprotein 0.0641723
PDIA6 protein disulfide isomerase family A, member 6 0.0638558
TNIP1 TNFAIP3 interacting protein 1 0.0614387
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0595445
RPL3 ribosomal protein L3 0.0576755
COL6A1 collagen, type VI, alpha 1 0.0568006
MACF1 microtubule-actin crosslinking factor 1 0.0567201
HSPA8 heat shock 70kDa protein 8 0.0543382
APP amyloid beta (A4) precursor protein 0.0517356
ATP13A3 ATPase type 13A3 0.0510431
STC1 stanniocalcin 1 0.0499584
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0492526
NFE2L1 nuclear factor, erythroid 2-like 1 0.0488883
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 0.0472546
INHBA inhibin, beta A 0.0470383
IGFBP7 insulin-like growth factor binding protein 7 0.0464762
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0462352
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0453503
TM4SF1 transmembrane 4 L six family member 1 0.0452445
CSDE1 cold shock domain containing E1, RNA-binding 0.0433003
SDC2 syndecan 2 0.0431585
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0424774
TMSB4X thymosin beta 4, X-linked 0.0418673
SOD2 superoxide dismutase 2, mitochondrial 0.0406495
JARID2 jumonji, AT rich interactive domain 2 0.0396899
HIPK2 homeodomain interacting protein kinase 2 0.038766
PLEC plectin 0.0381526
NAV2 neuron navigator 2 0.0378614
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.037338
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0372748
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0365305
NAV1 neuron navigator 1 0.0360902
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.034979
ARRDC3 arrestin domain containing 3 0.0349743
RPL4 ribosomal protein L4 0.0347394
B2M beta-2-microglobulin 0.0336119
STC2 stanniocalcin 2 0.0332092
COL4A1 collagen, type IV, alpha 1 0.0329778
CALU calumenin 0.0329258
HLA-A major histocompatibility complex, class I, A 0.0324508
TMF1 TATA element modulatory factor 1 0.0323778
TNS1 tensin 1 0.0322756
VMP1 vacuole membrane protein 1 0.0320547
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0315884
RACK1 receptor for activated C kinase 1 0.0315394
MSN moesin 0.0314087
CANX calnexin 0.0313613
SFTPA2 surfactant protein A2 0.0311684
CTSB cathepsin B 0.0302091
IFI6 interferon, alpha-inducible protein 6 0.0301792
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0298277
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0296057
IL6 interleukin 6 0.0292559
DPYSL2 dihydropyrimidinase-like 2 0.0291052
CDH13 cadherin 13 0.0290263
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0288136
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 0.0287065
AKAP12 A kinase (PRKA) anchor protein 12 0.0286077
ANXA1 annexin A1 0.0284019
PICALM phosphatidylinositol binding clathrin assembly protein 0.0282268
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0276716
TPM3 tropomyosin 3 0.0275479
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0273517
ANO6 anoctamin 6 0.0268582
COL3A1 collagen, type III, alpha 1 0.0266314
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0265368
RPS12 ribosomal protein S12 0.0260275
HYOU1 hypoxia up-regulated 1 0.0260151
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0259922
LIMS1 LIM and senescent cell antigen-like domains 1 0.0258271
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 0.0257122
RND3 Rho family GTPase 3 0.0252736
PKM pyruvate kinase, muscle 0.0250525
COPA coatomer protein complex, subunit alpha 0.0249734
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.024833
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.024791
CNOT12 CCR4-NOT transcription complex subunit 12 0.0245728
GJA1 gap junction protein, alpha 1, 43kDa 0.0244745
CD44 CD44 molecule (Indian blood group) 0.0242223
OPTN optineurin 0.0241188
RPS3 ribosomal protein S3 0.0239477
MTSS1 metastasis suppressor 1 0.0237176
DSPP dentin sialophosphoprotein 0.0234152
SRRM2 serine/arginine repetitive matrix 2 0.0233338
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0232296
PPP1R18 protein phosphatase 1, regulatory subunit 18 0.0231395

decreased expression

Symbol Name Standardized Value
MT2A metallothionein 2A -0.197373
FN1 fibronectin 1 -0.17748
NDRG1 N-myc downstream regulated 1 -0.167631
IGFBP3 insulin-like growth factor binding protein 3 -0.164936
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.110411
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.109785
COL1A1 collagen, type I, alpha 1 -0.0943976
TMSB10 thymosin beta 10 -0.0894072
RPL35A ribosomal protein L35a -0.0876587
MT1X metallothionein 1X -0.071716
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0604121
VIM vimentin -0.0530257
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0495934
ZBTB20 zinc finger and BTB domain containing 20 -0.0486734
DLG1 discs, large homolog 1 (Drosophila) -0.0451912
LOC112694756 uncharaterized LOC112694756 -0.0437674
LMAN1 lectin, mannose-binding, 1 -0.0432621
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.042395
COL1A2 collagen, type I, alpha 2 -0.0418937
TRPS1 trichorhinophalangeal syndrome I -0.0401521
DPYD dihydropyrimidine dehydrogenase -0.0385828
RPS19 ribosomal protein S19 -0.0376667
GNAS GNAS complex locus -0.0367731
F3 coagulation factor III (thromboplastin, tissue factor) -0.0363839
ALCAM activated leukocyte cell adhesion molecule -0.0346094
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0345247
RUNX1 runt-related transcription factor 1 -0.0337763
EGR1 early growth response 1 -0.0329518
RPLP1 ribosomal protein, large, P1 -0.0311671
KPNB1 karyopherin (importin) beta 1 -0.0300239
PXDN peroxidasin -0.0299511
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 -0.0294091
SLC39A14 solute carrier family 39 (zinc transporter), member 14 -0.0292751
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0282881
VDAC1 voltage-dependent anion channel 1 -0.0275023
POSTN periostin, osteoblast specific factor -0.026848
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0266721
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0265309
PDE4D phosphodiesterase 4D, cAMP-specific -0.025753
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0257373
RRBP1 ribosome binding protein 1 -0.0255348
PFN1 profilin 1 -0.0248776
MAP4 microtubule-associated protein 4 -0.0243515
TSC22D2 TSC22 domain family, member 2 -0.0242199
SLC24A3 solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 -0.0240327
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0238176
NFIX nuclear factor I/X (CCAAT-binding transcription factor) -0.0235943
NKTR natural killer cell triggering receptor -0.0234421
RAB7A RAB7A, member RAS oncogene family -0.0234214
FKBP10 FK506 binding protein 10, 65 kDa -0.0233877
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0231858
CAV1 caveolin 1, caveolae protein, 22kDa -0.0229427
GLIS3 GLIS family zinc finger 3 -0.0229315
CSF1 colony stimulating factor 1 (macrophage) -0.0224028
RPS20 ribosomal protein S20 -0.0223854
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0218358
TMEM165 transmembrane protein 165 -0.0218061
PRELID2 PRELI domain containing 2 -0.0217074
PRR16 proline rich 16 -0.0211643
RPS6 ribosomal protein S6 -0.0207755
NREP neuronal regeneration related protein -0.0207401
CNTN5 contactin 5 -0.0206238
HMGB1 high mobility group box 1 -0.0205722
TRAM1 translocation associated membrane protein 1 -0.020481
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.020282
RPL32 ribosomal protein L32 -0.020092
EHD2 EH-domain containing 2 -0.0194364
ERLEC1 endoplasmic reticulum lectin 1 -0.0191818
ANAPC5 anaphase promoting complex subunit 5 -0.0190292
ABI3BP ABI family, member 3 (NESH) binding protein -0.0189316
COL5A1 collagen, type V, alpha 1 -0.0188772
FTL ferritin, light polypeptide -0.0188584
TPM4 tropomyosin 4 -0.0182473
PRRC1 proline-rich coiled-coil 1 -0.0182382
HP1BP3 heterochromatin protein 1, binding protein 3 -0.0181876
GLIPR1 GLI pathogenesis-related 1 -0.0180191
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0178846
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.0175966
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.017373
RPLP2 ribosomal protein, large, P2 -0.0170664
RPL34 ribosomal protein L34 -0.0169733
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) -0.0169142
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase -0.0168146
RTN4 reticulon 4 -0.0167927
RPS24 ribosomal protein S24 -0.0167848
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0167298
RPS21 ribosomal protein S21 -0.0166958
GNAI2 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 -0.0164166
MRPS6 mitochondrial ribosomal protein S6 -0.0159457
CDH2 cadherin 2, type 1, N-cadherin (neuronal) -0.0159144
SEPTIN7 septin 7 -0.0157786
TAPBP TAP binding protein (tapasin) -0.0157676
HMGA1 high mobility group AT-hook 1 -0.0157158
RPL28 ribosomal protein L28 -0.0156631
CAPZB capping protein (actin filament) muscle Z-line, beta -0.015628
ICAM1 intercellular adhesion molecule 1 -0.015624
SEC62 SEC62 homolog (S. cerevisiae) -0.0154321
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0153811
PPP2R3A protein phosphatase 2, regulatory subunit B'', alpha -0.0153049
BTG1 B-cell translocation gene 1, anti-proliferative -0.0151839