Adagrasib_HepG2/C3A Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Adagrasib perturbation in HepG2/C3A cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Adagrasib_HepG2/C3A drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
AKAP12 A kinase (PRKA) anchor protein 12 0.332056
DSPP dentin sialophosphoprotein 0.158199
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.12616
TF transferrin 0.099883
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0850942
VEGFA vascular endothelial growth factor A 0.0805944
RPS12 ribosomal protein S12 0.0758662
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0718279
TPT1 tumor protein, translationally-controlled 1 0.0698759
DDIT4 DNA-damage-inducible transcript 4 0.0610666
ERRFI1 ERBB receptor feedback inhibitor 1 0.0574011
RPL3 ribosomal protein L3 0.0523512
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0511288
PEG3 paternally expressed 3 0.0450254
RPS6 ribosomal protein S6 0.0434231
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0424203
RPS3 ribosomal protein S3 0.0417934
RPL4 ribosomal protein L4 0.0413776
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0411224
SRRM1 serine/arginine repetitive matrix 1 0.0406362
RPL11 ribosomal protein L11 0.0400656
AHSG alpha-2-HS-glycoprotein 0.0399055
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0398214
INSIG2 insulin induced gene 2 0.0389022
RPL37A ribosomal protein L37a 0.0382256
RPL13A ribosomal protein L13a 0.0359337
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.035737
RPL26 ribosomal protein L26 0.0343543
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0342893
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0335469
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0330604
SDC4 syndecan 4 0.0321535
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0319669
EHBP1 EH domain binding protein 1 0.0319417
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0314733
RPL7 ribosomal protein L7 0.0309909
APLP2 amyloid beta (A4) precursor-like protein 2 0.0309005
CP ceruloplasmin (ferroxidase) 0.0307593
RPS17 ribosomal protein S17 0.030507
SESTD1 SEC14 and spectrin domains 1 0.0304784
RPL37 ribosomal protein L37 0.0298601
FMNL2 formin-like 2 0.0297537
CPE carboxypeptidase E 0.0295301
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0292036
APOA2 apolipoprotein A-II 0.0289006
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0289002
PDIA6 protein disulfide isomerase family A, member 6 0.0288231
RPLP0 ribosomal protein, large, P0 0.0285638
GPX4 glutathione peroxidase 4 0.0271817
LYZ lysozyme 0.0270381
AFDN afadin, adherens junction formation factor 0.0268395
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0266291
LDHA lactate dehydrogenase A 0.0259419
RPL27 ribosomal protein L27 0.0257447
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0256302
KIF5B kinesin family member 5B 0.0256151
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0255454
RSRC2 arginine/serine-rich coiled-coil 2 0.025516
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0253398
KDM3A lysine (K)-specific demethylase 3A 0.0250182
TRIM26 tripartite motif containing 26 0.0249696
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 0.0249139
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide 0.0248541
RACK1 receptor for activated C kinase 1 0.0247163
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0237148
CRY1 cryptochrome circadian clock 1 0.02365
RPS8 ribosomal protein S8 0.0236479
CSDE1 cold shock domain containing E1, RNA-binding 0.0233626
MYH9 myosin, heavy chain 9, non-muscle 0.0229894
NACA nascent polypeptide-associated complex alpha subunit 0.0229363
SFTPA2 surfactant protein A2 0.0224707
PSME4 proteasome (prosome, macropain) activator subunit 4 0.0223945
PAPOLA poly(A) polymerase alpha 0.0223928
TNIP1 TNFAIP3 interacting protein 1 0.0223626
HSPA8 heat shock 70kDa protein 8 0.0220682
MACF1 microtubule-actin crosslinking factor 1 0.0220325
RPS4Y1 ribosomal protein S4, Y-linked 1 0.022013
NCKAP1 NCK-associated protein 1 0.0219977
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 0.0218894
RNASET2 ribonuclease T2 0.0216807
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0214882
ESYT2 extended synaptotagmin-like protein 2 0.0214614
OSBPL10 oxysterol binding protein-like 10 0.0214342
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0213561
CHMP4B charged multivesicular body protein 4B 0.0210935
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1 0.0208609
ACSL5 acyl-CoA synthetase long-chain family member 5 0.0207417
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) 0.0204696
KRT18 keratin 18, type I 0.0203542
DST dystonin 0.0203441
ASXL1 additional sex combs like transcriptional regulator 1 0.0202277
TPI1 triosephosphate isomerase 1 0.0202158
BZW1 basic leucine zipper and W2 domains 1 0.0201798
PTBP3 polypyrimidine tract binding protein 3 0.0198521
PLIN2 perilipin 2 0.0198124
PPIG peptidylprolyl isomerase G (cyclophilin G) 0.0198096
RPL12 ribosomal protein L12 0.0197651
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0197647
RPL18 ribosomal protein L18 0.0196665
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0196588

decreased expression

Symbol Name Standardized Value
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.259575
IGF2 insulin-like growth factor 2 -0.254445
FN1 fibronectin 1 -0.185555
APOB apolipoprotein B -0.126323
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.09246
TIMP1 TIMP metallopeptidase inhibitor 1 -0.0770141
LRMDA leucine rich melanocyte differentiation associated -0.0726272
GPC6 glypican 6 -0.0656197
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0653434
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.0603063
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 -0.0599548
IGFBP1 insulin-like growth factor binding protein 1 -0.058571
TNFSF14 tumor necrosis factor (ligand) superfamily, member 14 -0.050719
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) -0.0493662
LOC112694756 uncharaterized LOC112694756 -0.0488518
NKD1 naked cuticle homolog 1 (Drosophila) -0.0416059
EGR1 early growth response 1 -0.0404633
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0396189
DNAH17 dynein, axonemal, heavy chain 17 -0.0376161
RPL35A ribosomal protein L35a -0.0365084
RPS27A ribosomal protein S27a -0.0359179
EPAS1 endothelial PAS domain protein 1 -0.0352686
NDRG1 N-myc downstream regulated 1 -0.0349702
INTS6 integrator complex subunit 6 -0.034967
VCL vinculin -0.0337531
CEMIP2 cell migration inducing hyaluronidase 2 -0.0334786
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0333711
MBD5 methyl-CpG binding domain protein 5 -0.0322933
ACTN4 actinin, alpha 4 -0.0306132
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0301212
ASPH aspartate beta-hydroxylase -0.0295633
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) -0.0287971
MALRD1 MAM and LDL receptor class A domain containing 1 -0.0287581
CRLS1 cardiolipin synthase 1 -0.0286941
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae) -0.0284755
IQSEC1 IQ motif and Sec7 domain 1 -0.0278855
UBC ubiquitin C -0.027622
DOCK4 dedicator of cytokinesis 4 -0.0274703
ZBTB20 zinc finger and BTB domain containing 20 -0.0260495
SMAD3 SMAD family member 3 -0.0259185
SVIL supervillin -0.0257147
DHRS3 dehydrogenase/reductase (SDR family) member 3 -0.0251397
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0247259
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.024624
PTPRK protein tyrosine phosphatase, receptor type, K -0.0245091
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0242903
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.023862
TAS2R14 taste receptor, type 2, member 14 -0.0233665
KDM4C lysine (K)-specific demethylase 4C -0.0233433
AGO2 argonaute RISC catalytic component 2 -0.0232975
ZNF638 zinc finger protein 638 -0.0229882
MBNL3 muscleblind-like splicing regulator 3 -0.0228273
MAN1A1 mannosidase, alpha, class 1A, member 1 -0.0223214
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1 -0.0223149
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) -0.0222291
IGF1R insulin-like growth factor 1 receptor -0.0220115
FTH1 ferritin, heavy polypeptide 1 -0.0219814
FAT1 FAT atypical cadherin 1 -0.0218143
GLG1 golgi glycoprotein 1 -0.0215966
CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 -0.0214544
SPDYA speedy/RINGO cell cycle regulator family member A -0.0214179
RUNX1 runt-related transcription factor 1 -0.0209733
MAML2 mastermind-like 2 (Drosophila) -0.0207936
SHOC2 soc-2 suppressor of clear homolog (C. elegans) -0.020459
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0201946
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.0201734
RNF213 ring finger protein 213 -0.0201027
TIMP2 TIMP metallopeptidase inhibitor 2 -0.0200601
NPAS2 neuronal PAS domain protein 2 -0.0200035
ATRN attractin -0.0199412
PTCHD4 patched domain containing 4 -0.0198397
ATXN1 ataxin 1 -0.0194824
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0194086
PATJ PATJ crumbs cell polarity complex component -0.0192875
POTEF POTE ankyrin domain family, member F -0.0190916
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0190298
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0189647
PPARD peroxisome proliferator-activated receptor delta -0.0189508
EXOC6B exocyst complex component 6B -0.0187415
ZNF207 zinc finger protein 207 -0.0186719
JUN jun proto-oncogene -0.018381
SKIL SKI-like proto-oncogene -0.0183003
ATF7IP2 activating transcription factor 7 interacting protein 2 -0.0181757
ATP11A ATPase, class VI, type 11A -0.0180359
PDLIM5 PDZ and LIM domain 5 -0.0179631
PDIA3 protein disulfide isomerase family A, member 3 -0.0179541
ADARB1 adenosine deaminase, RNA-specific, B1 -0.0178982
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0178512
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 -0.0178315
TMSB10 thymosin beta 10 -0.0178256
TGFBI transforming growth factor, beta-induced, 68kDa -0.01764
ZSWIM5 zinc finger, SWIM-type containing 5 -0.0173806
SP100 SP100 nuclear antigen -0.0172686
EXOC4 exocyst complex component 4 -0.0172558
PTPRG protein tyrosine phosphatase, receptor type, G -0.017119
ITGB5 integrin, beta 5 -0.0170916
OSMR oncostatin M receptor -0.0169807
GSE1 Gse1 coiled-coil protein -0.0168937
FAM135A family with sequence similarity 135, member A -0.0168937
CMIP c-Maf inducing protein -0.0168326