Adagrasib_KATO III Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Adagrasib perturbation in KATO III cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Adagrasib_KATO III drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FGFR2 fibroblast growth factor receptor 2 0.416829
KRT18 keratin 18, type I 0.116041
VEGFA vascular endothelial growth factor A 0.0921326
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0672962
ANXA1 annexin A1 0.0592992
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.0542431
B2M beta-2-microglobulin 0.0528885
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0522953
TMSB4X thymosin beta 4, X-linked 0.0505019
NFE2L1 nuclear factor, erythroid 2-like 1 0.0494964
DSPP dentin sialophosphoprotein 0.0472811
MYH9 myosin, heavy chain 9, non-muscle 0.0449795
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0428008
TMF1 TATA element modulatory factor 1 0.0409122
MBNL2 muscleblind-like splicing regulator 2 0.0385428
FAM13A family with sequence similarity 13, member A 0.0365269
RPS3 ribosomal protein S3 0.0364607
RPS12 ribosomal protein S12 0.0360336
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0355724
HSPA8 heat shock 70kDa protein 8 0.0332557
SRRM2 serine/arginine repetitive matrix 2 0.0332046
RPL4 ribosomal protein L4 0.0325264
SLK STE20-like kinase 0.0324151
FTL ferritin, light polypeptide 0.0319943
HLA-A major histocompatibility complex, class I, A 0.0314475
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0313745
KRT19 keratin 19, type I 0.0312092
PGK1 phosphoglycerate kinase 1 0.0305138
LCN2 lipocalin 2 0.0304605
LAMB3 laminin, beta 3 0.0302525
DSTN destrin (actin depolymerizing factor) 0.0295428
SET SET nuclear proto-oncogene 0.0291887
CSNK1A1 casein kinase 1, alpha 1 0.0290567
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0289506
SLTM SAFB-like, transcription modulator 0.0277979
NUPR1 nuclear protein, transcriptional regulator, 1 0.0275956
RPS17 ribosomal protein S17 0.027455
RPL3 ribosomal protein L3 0.0271714
MACF1 microtubule-actin crosslinking factor 1 0.027087
SFTPA2 surfactant protein A2 0.0267354
LIMA1 LIM domain and actin binding 1 0.0260276
CLINT1 clathrin interactor 1 0.0256119
GOLGA4 golgin A4 0.025388
HDAC9 histone deacetylase 9 0.0252769
CSDE1 cold shock domain containing E1, RNA-binding 0.0248709
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide 0.0248107
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0247863
LIPH lipase, member H 0.0247194
MCU mitochondrial calcium uniporter 0.0245126
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0243814
TNIP1 TNFAIP3 interacting protein 1 0.024246
HDGF hepatoma-derived growth factor 0.0242243
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0240787
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0240498
ZFP36L2 ZFP36 ring finger protein-like 2 0.023516
TPT1 tumor protein, translationally-controlled 1 0.0234068
KLF5 Kruppel-like factor 5 (intestinal) 0.0227203
ESYT2 extended synaptotagmin-like protein 2 0.0223607
ATF4 activating transcription factor 4 0.0223277
PMM2 phosphomannomutase 2 0.0214985
RNF145 ring finger protein 145 0.0214523
TMC5 transmembrane channel-like 5 0.0207947
ANXA11 annexin A11 0.0205995
ANXA3 annexin A3 0.0205329
RPL11 ribosomal protein L11 0.0199971
SNX9 sorting nexin 9 0.0198914
KMT2E lysine (K)-specific methyltransferase 2E 0.0196827
TMED2 transmembrane emp24 domain trafficking protein 2 0.0196789
CNBP CCHC-type zinc finger, nucleic acid binding protein 0.0193998
OPTN optineurin 0.019208
GOLGB1 golgin B1 0.0190768
AKAP13 A kinase (PRKA) anchor protein 13 0.0189895
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0188445
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1) 0.0187965
ADAM9 ADAM metallopeptidase domain 9 0.0187318
EPS8 epidermal growth factor receptor pathway substrate 8 0.0183976
DDIT4 DNA-damage-inducible transcript 4 0.0182625
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0181443
NARS1 asparaginyl-tRNA synthetase 1 0.0181086
RPS2 ribosomal protein S2 0.018045
KDELR1 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 1 0.0177115
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0175943
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0174837
DDX6 DEAD (Asp-Glu-Ala-Asp) box helicase 6 0.0174438
TPM3 tropomyosin 3 0.017329
NCKAP1 NCK-associated protein 1 0.0172595
NACA nascent polypeptide-associated complex alpha subunit 0.0171702
CEACAM1 carcinoembryonic antigen-related cell adhesion molecule 1 (biliary glycoprotein) 0.0169835
EIF4H eukaryotic translation initiation factor 4H 0.0169458
APOL1 apolipoprotein L, 1 0.0169326
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 0.0167185
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.0166774
AKAP12 A kinase (PRKA) anchor protein 12 0.0166247
GDA guanine deaminase 0.0166114
TFF2 trefoil factor 2 0.016606
ITGA6 integrin, alpha 6 0.0165753
SLCO1B3 solute carrier organic anion transporter family, member 1B3 0.0165545
AREG amphiregulin 0.0164194
RAD23B RAD23 homolog B (S. cerevisiae) 0.0163982
SRRM1 serine/arginine repetitive matrix 1 0.0163696

decreased expression

Symbol Name Standardized Value
GMDS GDP-mannose 4,6-dehydratase -0.187472
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.176185
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.139961
TMSB10 thymosin beta 10 -0.119599
RPL35A ribosomal protein L35a -0.0979212
LOC112694756 uncharaterized LOC112694756 -0.0941059
PDIA4 protein disulfide isomerase family A, member 4 -0.0937316
PDIA3 protein disulfide isomerase family A, member 3 -0.0805437
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0623374
AGR2 anterior gradient 2 -0.0597385
ACTN4 actinin, alpha 4 -0.059378
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0593208
RPLP1 ribosomal protein, large, P1 -0.055552
AHR aryl hydrocarbon receptor -0.0553186
ATF7IP2 activating transcription factor 7 interacting protein 2 -0.0542821
KPNB1 karyopherin (importin) beta 1 -0.0501279
GNAS GNAS complex locus -0.0498598
TRPS1 trichorhinophalangeal syndrome I -0.0493556
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.049173
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0490802
CEMIP cell migration inducing protein, hyaluronan binding -0.0474748
RNF213 ring finger protein 213 -0.0468772
RUNX1 runt-related transcription factor 1 -0.0466564
FAT1 FAT atypical cadherin 1 -0.0458107
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0454513
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0440894
LLGL2 lethal giant larvae homolog 2 (Drosophila) -0.0439047
TMEM123 transmembrane protein 123 -0.0431928
ASNS asparagine synthetase (glutamine-hydrolyzing) -0.0428439
RTN3 reticulon 3 -0.0424684
SPIDR scaffolding protein involved in DNA repair -0.042452
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0423976
ITGB4 integrin, beta 4 -0.04107
PHF14 PHD finger protein 14 -0.0407899
ATXN1 ataxin 1 -0.0397179
RPS27A ribosomal protein S27a -0.0389822
DLG1 discs, large homolog 1 (Drosophila) -0.0378969
APLP2 amyloid beta (A4) precursor-like protein 2 -0.037084
SPDYA speedy/RINGO cell cycle regulator family member A -0.0366513
NCOA7 nuclear receptor coactivator 7 -0.036477
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0364593
RPS19 ribosomal protein S19 -0.0362223
RPS24 ribosomal protein S24 -0.0360193
CANX calnexin -0.0358458
TFRC transferrin receptor -0.0352464
COBL cordon-bleu WH2 repeat protein -0.0341362
RSRC1 arginine/serine-rich coiled-coil 1 -0.0340423
PTMA prothymosin, alpha -0.0340131
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0339668
H1-0 H1.0 linker histone -0.0334336
HLA-C major histocompatibility complex, class I, C -0.0332369
INTS6 integrator complex subunit 6 -0.0324735
ZC3H12B zinc finger CCCH-type containing 12B -0.0324074
UBC ubiquitin C -0.0321644
CBL Cbl proto-oncogene, E3 ubiquitin protein ligase -0.0319555
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 -0.0318381
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0316585
XKR6 XK, Kell blood group complex subunit-related family, member 6 -0.0314147
ACACA acetyl-CoA carboxylase alpha -0.0311777
FAF1 Fas (TNFRSF6) associated factor 1 -0.0311233
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0308172
WWOX WW domain containing oxidoreductase -0.0307585
SKAP1 src kinase associated phosphoprotein 1 -0.0299912
NF1 neurofibromin 1 -0.0297657
IARS1 isoleucyl-tRNA synthetase 1 -0.0297558
HMGB1 high mobility group box 1 -0.0295103
ANXA2 annexin A2 -0.0294572
STAU1 staufen double-stranded RNA binding protein 1 -0.0294385
FUS FUS RNA binding protein -0.0291945
RAD51B RAD51 paralog B -0.0290406
BPTF bromodomain PHD finger transcription factor -0.0289089
EHBP1 EH domain binding protein 1 -0.0286637
GPHN gephyrin -0.0285992
CDK6 cyclin-dependent kinase 6 -0.0284046
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1 -0.0280266
POF1B premature ovarian failure, 1B -0.0272332
PCBP2 poly(rC) binding protein 2 -0.0272269
POLA1 polymerase (DNA directed), alpha 1, catalytic subunit -0.0271731
ZNF207 zinc finger protein 207 -0.0269555
VTI1A vesicle transport through interaction with t-SNAREs 1A -0.0269484
PTPRG protein tyrosine phosphatase, receptor type, G -0.0267736
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit -0.0265777
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0262742
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa -0.026272
SMC4 structural maintenance of chromosomes 4 -0.026265
EXOC4 exocyst complex component 4 -0.0262431
PKP4 plakophilin 4 -0.0259782
RNF216 ring finger protein 216 -0.0258517
ATF5 activating transcription factor 5 -0.025686
WDR45B WD repeat domain 45B -0.0254435
FDFT1 farnesyl-diphosphate farnesyltransferase 1 -0.0254139
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0254082
CAMKMT calmodulin-lysine N-methyltransferase -0.0252711
CDKAL1 CDK5 regulatory subunit associated protein 1-like 1 -0.0252434
DIAPH2 diaphanous-related formin 2 -0.0252237
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0252125
ZBTB44 zinc finger and BTB domain containing 44 -0.025159
ADIPOR2 adiponectin receptor 2 -0.025125
CCDC146 coiled-coil domain containing 146 -0.0249198
GLG1 golgi glycoprotein 1 -0.0249111