Adagrasib_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Adagrasib perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Adagrasib_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
COL5A2 collagen, type V, alpha 2 0.111819
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.111733
COL3A1 collagen, type III, alpha 1 0.10388
COL11A1 collagen, type XI, alpha 1 0.0974736
ITGAV integrin, alpha V 0.0915881
ZEB2 zinc finger E-box binding homeobox 2 0.0861752
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0718167
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0699565
TMSB4X thymosin beta 4, X-linked 0.0689174
RPL4 ribosomal protein L4 0.0681664
PCLO piccolo presynaptic cytomatrix protein 0.065912
NCKAP1 NCK-associated protein 1 0.0653425
HDAC9 histone deacetylase 9 0.0607372
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0605173
H1-4 H1.4 linker histone, cluster member 0.0538158
TPT1 tumor protein, translationally-controlled 1 0.0531768
RPS12 ribosomal protein S12 0.0510298
ZNF608 zinc finger protein 608 0.0508991
RPL3 ribosomal protein L3 0.0497908
RPS2 ribosomal protein S2 0.0496015
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0491841
NACA nascent polypeptide-associated complex alpha subunit 0.0490994
PDGFC platelet derived growth factor C 0.0484458
RPL37 ribosomal protein L37 0.046673
DST dystonin 0.0466054
NR2F1 nuclear receptor subfamily 2, group F, member 1 0.0461709
MYH9 myosin, heavy chain 9, non-muscle 0.0453673
UPP1 uridine phosphorylase 1 0.0440265
CFL2 cofilin 2 (muscle) 0.0440156
ENAH enabled homolog (Drosophila) 0.0430695
THBS1 thrombospondin 1 0.0429859
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 0.0424554
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0420661
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0417824
RFPL4B ret finger protein-like 4B 0.0416313
ADGRV1 adhesion G protein-coupled receptor V1 0.0413916
SPATS2 spermatogenesis associated, serine-rich 2 0.0413655
TLK1 tousled-like kinase 1 0.0408641
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0406335
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0402628
CADM2 cell adhesion molecule 2 0.0399794
OSBPL8 oxysterol binding protein-like 8 0.0396475
TRA2A transformer 2 alpha homolog (Drosophila) 0.0393061
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0385595
MB21D2 Mab-21 domain containing 2 0.0384549
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0384234
CSDE1 cold shock domain containing E1, RNA-binding 0.038386
RPL26 ribosomal protein L26 0.0374316
ANXA1 annexin A1 0.0371791
MKI67 marker of proliferation Ki-67 0.0368194
ANKRD12 ankyrin repeat domain 12 0.0364429
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0364421
RPS18 ribosomal protein S18 0.0362125
PCDH18 protocadherin 18 0.0357976
SRRM2 serine/arginine repetitive matrix 2 0.0357235
FOXG1 forkhead box G1 0.0356766
AKAP12 A kinase (PRKA) anchor protein 12 0.0355442
STMN1 stathmin 1 0.0353146
HNRNPH3 heterogeneous nuclear ribonucleoprotein H3 (2H9) 0.0349248
PRAG1 PEAK1 related, kinase-activating pseudokinase 1 0.0346112
SNRNP200 small nuclear ribonucleoprotein 200kDa (U5) 0.0340322
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0339051
GASK1B golgi associated kinase 1B 0.0335233
H1-5 H1.5 linker histone, cluster member 0.0334206
EEF1G eukaryotic translation elongation factor 1 gamma 0.0333933
YES1 YES proto-oncogene 1, Src family tyrosine kinase 0.0332411
RPL7 ribosomal protein L7 0.0328145
ARHGAP15 Rho GTPase activating protein 15 0.032254
BZW1 basic leucine zipper and W2 domains 1 0.0322329
MDK midkine (neurite growth-promoting factor 2) 0.0319772
HNRNPR heterogeneous nuclear ribonucleoprotein R 0.0318829
RPL13A ribosomal protein L13a 0.0317985
FST follistatin 0.0317123
PTMA prothymosin, alpha 0.0313584
TMED9 transmembrane emp24 protein transport domain containing 9 0.0305067
ERBB4 erb-b2 receptor tyrosine kinase 4 0.0302335
ANKRD11 ankyrin repeat domain 11 0.0300334
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0297157
SP3 Sp3 transcription factor 0.029669
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0296253
FXR1 fragile X mental retardation, autosomal homolog 1 0.0291635
FUS FUS RNA binding protein 0.0290449
FIP1L1 factor interacting with PAPOLA and CPSF1 0.0290074
RDX radixin 0.0286808
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0285775
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.0283957
CABLES1 Cdk5 and Abl enzyme substrate 1 0.0283681
SFRP4 secreted frizzled-related protein 4 0.0282379
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0277893
SFTPA2 surfactant protein A2 0.0277583
ISG15 ISG15 ubiquitin-like modifier 0.0276319
ELF2 E74-like factor 2 (ets domain transcription factor) 0.0275463
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0275426
MCFD2 multiple coagulation factor deficiency 2 0.0273533
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.027164
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0267247
DARS1 aspartyl-tRNA synthetase 1 0.0264341
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0263119
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0259267
KIF5B kinesin family member 5B 0.0258904

decreased expression

Symbol Name Standardized Value
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.148086
TSC22D2 TSC22 domain family, member 2 -0.117559
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.108654
TMSB10 thymosin beta 10 -0.107456
VIM vimentin -0.0912214
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0837132
SRP54 signal recognition particle 54kDa -0.0686433
GNAS GNAS complex locus -0.0666072
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0629219
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) -0.0624119
RTN4 reticulon 4 -0.0612626
HMGB1 high mobility group box 1 -0.0582026
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.0569107
ACTN4 actinin, alpha 4 -0.0553365
BMPR1A bone morphogenetic protein receptor, type IA -0.055081
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0513297
RPLP1 ribosomal protein, large, P1 -0.0512513
NCOA2 nuclear receptor coactivator 2 -0.0507177
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0505255
RPL35A ribosomal protein L35a -0.0503981
MRPS6 mitochondrial ribosomal protein S6 -0.0503743
NEBL nebulette -0.048441
YBX1 Y box binding protein 1 -0.048187
NIPBL Nipped-B homolog (Drosophila) -0.0479673
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.0467835
FNDC3B fibronectin type III domain containing 3B -0.0466021
RAB7A RAB7A, member RAS oncogene family -0.0455735
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0441608
CSMD3 CUB and Sushi multiple domains 3 -0.0440677
PFN1 profilin 1 -0.0439865
POTEF POTE ankyrin domain family, member F -0.0438223
LOC112694756 uncharaterized LOC112694756 -0.0428215
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0424567
STRN3 striatin, calmodulin binding protein 3 -0.0418407
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.04165
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0412223
PCDH9 protocadherin 9 -0.0404228
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0401434
NF1 neurofibromin 1 -0.0400808
TNRC6B trinucleotide repeat containing 6B -0.0400405
DLG1 discs, large homolog 1 (Drosophila) -0.0400084
ANK2 ankyrin 2, neuronal -0.0393005
CUX1 cut-like homeobox 1 -0.0386507
IARS1 isoleucyl-tRNA synthetase 1 -0.0381889
SLIT2 slit homolog 2 (Drosophila) -0.0377652
LOC102724023 ES1 protein homolog, mitochondrial -0.0375667
PDIA3 protein disulfide isomerase family A, member 3 -0.0373426
COTL1 coactosin-like F-actin binding protein 1 -0.0370174
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0361574
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) -0.036094
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0357252
SMYD3 SET and MYND domain containing 3 -0.0355364
CHD9 chromodomain helicase DNA binding protein 9 -0.0353121
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0352517
BIRC6 baculoviral IAP repeat containing 6 -0.0351691
GARS1 glycyl-tRNA synthetase 1 -0.0350734
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0350512
ATXN1 ataxin 1 -0.0348144
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0346308
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0343942
NRG1 neuregulin 1 -0.0340569
UBE2R2 ubiquitin-conjugating enzyme E2R 2 -0.0339373
FLNB filamin B, beta -0.0338018
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.0337032
FNDC3A fibronectin type III domain containing 3A -0.0336778
ASNS asparagine synthetase (glutamine-hydrolyzing) -0.0332331
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0332032
SLC44A5 solute carrier family 44, member 5 -0.0329175
ADGRG6 adhesion G protein-coupled receptor G6 -0.0328495
FTH1 ferritin, heavy polypeptide 1 -0.0327353
COL1A2 collagen, type I, alpha 2 -0.032673
SETD5 SET domain containing 5 -0.0326687
USP9X ubiquitin specific peptidase 9, X-linked -0.0325529
SYT1 synaptotagmin I -0.0324447
RTN3 reticulon 3 -0.032386
ZBTB20 zinc finger and BTB domain containing 20 -0.0321751
URI1 URI1, prefoldin-like chaperone -0.0320471
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0319639
SGO2 shugoshin 2 -0.0319064
TAS2R14 taste receptor, type 2, member 14 -0.0318278
LMNA lamin A/C -0.0316457
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0316452
NOP58 NOP58 ribonucleoprotein -0.031586
PTGES3 prostaglandin E synthase 3 (cytosolic) -0.0314735
TMEM165 transmembrane protein 165 -0.0313449
PIAS1 protein inhibitor of activated STAT, 1 -0.0313176
ARFGEF1 ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) -0.0312806
BRMS1L breast cancer metastasis-suppressor 1-like -0.031164
MYO10 myosin X -0.0310791
TRAK1 trafficking protein, kinesin binding 1 -0.0308818
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0308132
FRY furry homolog (Drosophila) -0.0308073
RAPGEF2 Rap guanine nucleotide exchange factor (GEF) 2 -0.0303407
LRCH3 leucine-rich repeats and calponin homology (CH) domain containing 3 -0.0303276
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 -0.0302472
ZFPM2 zinc finger protein, FOG family member 2 -0.0299843
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0299358
TUT4 terminal uridylyl transferase 4 -0.0298696
AFF4 AF4/FMR2 family, member 4 -0.0298225
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0297595