Adenine_SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Adenine perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Adenine_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTH1 ferritin, heavy polypeptide 1 0.103523
NAMPT nicotinamide phosphoribosyltransferase 0.0668315
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0565663
VEGFA vascular endothelial growth factor A 0.0560286
SMAD3 SMAD family member 3 0.0544257
B2M beta-2-microglobulin 0.0539763
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0481758
TMEM156 transmembrane protein 156 0.0475702
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0453578
TXNIP thioredoxin interacting protein 0.0446425
PRRC2C proline-rich coiled-coil 2C 0.0423649
ELL2 elongation factor, RNA polymerase II, 2 0.0419668
RNF145 ring finger protein 145 0.0387368
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0384284
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0381037
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0379225
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0373816
CXCL8 chemokine (C-X-C motif) ligand 8 0.0372829
NTN4 netrin 4 0.0325145
MBNL1 muscleblind-like splicing regulator 1 0.0314171
TXNRD1 thioredoxin reductase 1 0.0301359
ANKRD28 ankyrin repeat domain 28 0.0295278
WAC WW domain containing adaptor with coiled-coil 0.0289358
SFTPA2 surfactant protein A2 0.0288354
NEK7 NIMA-related kinase 7 0.0283718
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0278628
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0278388
NRP1 neuropilin 1 0.0274558
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.0273989
SEPTIN9 septin 9 0.0270488
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0268816
CALR calreticulin 0.0264376
YBX3 Y box binding protein 3 0.0262179
SPRED2 sprouty-related, EVH1 domain containing 2 0.025346
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0252546
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0251147
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0247672
KMT2E lysine (K)-specific methyltransferase 2E 0.0244773
RAB8B RAB8B, member RAS oncogene family 0.0240183
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0236831
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0234498
CDC73 cell division cycle 73 0.0234107
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0226564
PRPF8 pre-mRNA processing factor 8 0.021992
AFF4 AF4/FMR2 family, member 4 0.0217151
COPA coatomer protein complex, subunit alpha 0.0216835
RLF rearranged L-myc fusion 0.0216798
GOLGA4 golgin A4 0.0216218
RICTOR RPTOR independent companion of MTOR, complex 2 0.0208429
NUP58 nucleoporin 58 0.0206025
PELI1 pellino E3 ubiquitin protein ligase 1 0.0203568
MYH9 myosin, heavy chain 9, non-muscle 0.0202161
RACK1 receptor for activated C kinase 1 0.0201321
LIFR leukemia inhibitory factor receptor alpha 0.0199568
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.019937
SRPK2 SRSF protein kinase 2 0.0197521
NOP58 NOP58 ribonucleoprotein 0.0196889
DOCK5 dedicator of cytokinesis 5 0.0194453
PELO pelota homolog (Drosophila) 0.0194296
EEF2 eukaryotic translation elongation factor 2 0.01941
SVIL supervillin 0.0193235
FAT1 FAT atypical cadherin 1 0.0191709
MAPKAPK2 mitogen-activated protein kinase-activated protein kinase 2 0.0189976
ACBD3 acyl-CoA binding domain containing 3 0.0189334
EXT1 exostosin glycosyltransferase 1 0.0188812
KSR1 kinase suppressor of ras 1 0.0188281
EPS8 epidermal growth factor receptor pathway substrate 8 0.0187523
DDX24 DEAD (Asp-Glu-Ala-Asp) box helicase 24 0.0186904
TPR translocated promoter region, nuclear basket protein 0.0183511
PJA2 praja ring finger 2, E3 ubiquitin protein ligase 0.018351
POTEF POTE ankyrin domain family, member F 0.0183035
SHB Src homology 2 domain containing adaptor protein B 0.018298
ESYT2 extended synaptotagmin-like protein 2 0.0181391
UBA6 ubiquitin-like modifier activating enzyme 6 0.0181355
YBX1 Y box binding protein 1 0.0180558
FNBP1 formin binding protein 1 0.0177386
NPAS2 neuronal PAS domain protein 2 0.0175738
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0175645
NRIP1 nuclear receptor interacting protein 1 0.0175485
WDR45B WD repeat domain 45B 0.01739
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0173796
TOP1 topoisomerase (DNA) I 0.0173611
SETD5 SET domain containing 5 0.0171358
HELZ helicase with zinc finger 0.0170966
MTMR3 myotubularin related protein 3 0.0169991
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0169737
GOLPH3 golgi phosphoprotein 3 (coat-protein) 0.0169558
WDR26 WD repeat domain 26 0.0168367
TPM3 tropomyosin 3 0.0167851
SIK3 SIK family kinase 3 0.0167707
GPBP1 GC-rich promoter binding protein 1 0.0167543
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0167167
YTHDC1 YTH domain containing 1 0.0166746
BHLHE40 basic helix-loop-helix family, member e40 0.0166232
SLTM SAFB-like, transcription modulator 0.0163765
PTBP3 polypyrimidine tract binding protein 3 0.0163397
ETNK1 ethanolamine kinase 1 0.0161371
SUCO SUN domain containing ossification factor 0.0161271
KLHDC10 kelch domain containing 10 0.0161146
IL6ST interleukin 6 signal transducer 0.0160789

decreased expression

Symbol Name Standardized Value
NRG1 neuregulin 1 -0.24997
FN1 fibronectin 1 -0.157195
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.11622
HMGA2 high mobility group AT-hook 2 -0.0997126
ASPH aspartate beta-hydroxylase -0.0679488
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0599576
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0585269
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0574418
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0574371
SQSTM1 sequestosome 1 -0.0568742
VCL vinculin -0.0551583
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0551233
TAS2R14 taste receptor, type 2, member 14 -0.0489919
TPT1 tumor protein, translationally-controlled 1 -0.0481002
RAI14 retinoic acid induced 14 -0.0473351
AEBP2 AE binding protein 2 -0.047152
TMSB10 thymosin beta 10 -0.0468256
MBD5 methyl-CpG binding domain protein 5 -0.0448527
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0445534
GRB10 growth factor receptor-bound protein 10 -0.0405376
TRIO trio Rho guanine nucleotide exchange factor -0.0391898
MRPS6 mitochondrial ribosomal protein S6 -0.0383131
INTS6 integrator complex subunit 6 -0.0380242
LRRC23 leucine rich repeat containing 23 -0.0369036
EFNA5 ephrin-A5 -0.0365755
HLA-B major histocompatibility complex, class I, B -0.0355108
NDRG1 N-myc downstream regulated 1 -0.0352909
DNAH5 dynein, axonemal, heavy chain 5 -0.0347235
SYT1 synaptotagmin I -0.0339454
ZBTB20 zinc finger and BTB domain containing 20 -0.0339302
SOX5 SRY (sex determining region Y)-box 5 -0.0320309
RAD51B RAD51 paralog B -0.0318037
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.029823
GLIS3 GLIS family zinc finger 3 -0.0296041
TMSB4X thymosin beta 4, X-linked -0.0295842
SLC35F3 solute carrier family 35, member F3 -0.0282698
SPDYA speedy/RINGO cell cycle regulator family member A -0.0279803
SFRP1 secreted frizzled-related protein 1 -0.0272507
CADM1 cell adhesion molecule 1 -0.0272219
ITGA1 integrin, alpha 1 -0.0269283
IFI27 interferon, alpha-inducible protein 27 -0.0267856
SOX4 SRY (sex determining region Y)-box 4 -0.0265063
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.025886
VIM vimentin -0.0255501
LIMCH1 LIM and calponin homology domains 1 -0.0254604
LRMDA leucine rich melanocyte differentiation associated -0.0254362
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0251095
PTPRD protein tyrosine phosphatase, receptor type, D -0.0247557
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0247151
DPYD dihydropyrimidine dehydrogenase -0.0234712
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0234515
GPC6 glypican 6 -0.0234287
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0231337
MAML2 mastermind-like 2 (Drosophila) -0.0229193
TGFA transforming growth factor, alpha -0.022685
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0224645
MYOF myoferlin -0.022456
TENM4 teneurin transmembrane protein 4 -0.0224275
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0223464
CUX1 cut-like homeobox 1 -0.0220863
IGFBP5 insulin-like growth factor binding protein 5 -0.0220239
ACTG1 actin gamma 1 -0.0212723
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.0211898
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0211169
GNAS GNAS complex locus -0.0211145
PRKCA protein kinase C, alpha -0.0209933
PSD3 pleckstrin and Sec7 domain containing 3 -0.0209771
CCDC138 coiled-coil domain containing 138 -0.0198722
FHIT fragile histidine triad -0.0192909
IFI6 interferon, alpha-inducible protein 6 -0.019261
TBC1D22A TBC1 domain family, member 22A -0.0192236
PRH1 proline-rich protein HaeIII subfamily 1 -0.0188436
IGFBP3 insulin-like growth factor binding protein 3 -0.0186808
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 -0.0184337
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0179379
TENT5A terminal nucleotidyltransferase 5A -0.017901
FAM20C family with sequence similarity 20, member C -0.0178146
TM4SF1 transmembrane 4 L six family member 1 -0.0177149
PDE4D phosphodiesterase 4D, cAMP-specific -0.0174153
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0173729
S100A6 S100 calcium binding protein A6 -0.0172685
TNS3 tensin 3 -0.0170314
APOLD1 apolipoprotein L domain containing 1 -0.0169748
NABP1 nucleic acid binding protein 1 -0.0168495
CTSD cathepsin D -0.0166107
BZW1 basic leucine zipper and W2 domains 1 -0.0164914
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0163946
TUFT1 tuftelin 1 -0.0163834
S100A10 S100 calcium binding protein A10 -0.0161747
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 -0.0157443
HM13 histocompatibility (minor) 13 -0.0155868
ETV6 ets variant 6 -0.0155361
AHRR aryl-hydrocarbon receptor repressor -0.0155057
SUMF1 sulfatase modifying factor 1 -0.0154182
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0152572
TMEM165 transmembrane protein 165 -0.0151306
NBEA neurobeachin -0.0150003
KDM3B lysine (K)-specific demethylase 3B -0.0149222
ACOXL acyl-CoA oxidase-like -0.0148944
RPS21 ribosomal protein S21 -0.0146422