Afatinib_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Afatinib perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Afatinib_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
MT2A metallothionein 2A 0.0938665
PLAT plasminogen activator, tissue 0.0881178
FBN1 fibrillin 1 0.0721761
COL3A1 collagen, type III, alpha 1 0.0689915
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 0.0628962
B2M beta-2-microglobulin 0.0568959
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0526291
COL1A2 collagen, type I, alpha 2 0.0454311
TMSB4X thymosin beta 4, X-linked 0.0438889
NAP1L1 nucleosome assembly protein 1-like 1 0.0438376
COL8A1 collagen, type VIII, alpha 1 0.0429374
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.042078
TMSB10 thymosin beta 10 0.0413084
ATP13A3 ATPase type 13A3 0.0411757
VIM vimentin 0.0397694
PRSS23 protease, serine, 23 0.0396421
PTMA prothymosin, alpha 0.0376737
FTH1 ferritin, heavy polypeptide 1 0.0374265
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0357181
PGK1 phosphoglycerate kinase 1 0.0304624
KDM3A lysine (K)-specific demethylase 3A 0.0287877
PSD3 pleckstrin and Sec7 domain containing 3 0.0282642
GLS2 glutaminase 2 (liver, mitochondrial) 0.0267208
NFE2L1 nuclear factor, erythroid 2-like 1 0.0260988
AFDN afadin, adherens junction formation factor 0.0258199
FRMD4A FERM domain containing 4A 0.0258186
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0257663
ANKRD10 ankyrin repeat domain 10 0.025547
S100A4 S100 calcium binding protein A4 0.0246365
RPL37A ribosomal protein L37a 0.0236593
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0231368
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0217965
CD59 CD59 molecule, complement regulatory protein 0.0213611
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 0.0207593
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0204322
ARL15 ADP-ribosylation factor-like 15 0.0202423
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0199611
AHNAK AHNAK nucleoprotein 0.0188992
ARHGAP21 Rho GTPase activating protein 21 0.0186975
KIFAP3 kinesin-associated protein 3 0.0176357
VEGFC vascular endothelial growth factor C 0.0175682
TOP2B topoisomerase (DNA) II beta 180kDa 0.0174097
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0172291
DENND5A DENN/MADD domain containing 5A 0.0171557
ABTB3 ankyrin repeat and BTB domain containing 3 0.0170174
CTSB cathepsin B 0.0167717
SERINC1 serine incorporator 1 0.0164188
RPL26 ribosomal protein L26 0.0157909
SLC22A4 solute carrier family 22 (organic cation/zwitterion transporter), member 4 0.015473
MT1X metallothionein 1X 0.0151727
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0150995
DPYSL3 dihydropyrimidinase-like 3 0.015075
NCKAP1 NCK-associated protein 1 0.0149147
ZEB1 zinc finger E-box binding homeobox 1 0.0148998
SSTR2 somatostatin receptor 2 0.0147681
ARGLU1 arginine and glutamate rich 1 0.0147581
ANKRD36C ankyrin repeat domain 36C 0.0145824
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) 0.0144857
RPS27A ribosomal protein S27a 0.0144398
ST13 suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) 0.0144343
SERPINB6 serpin peptidase inhibitor, clade B (ovalbumin), member 6 0.0144242
DIRAS3 DIRAS family, GTP-binding RAS-like 3 0.0144059
EPRS1 glutamyl-prolyl-tRNA synthetase 1 0.0143865
ZEB2 zinc finger E-box binding homeobox 2 0.0142426
ANKRD36 ankyrin repeat domain 36 0.0138803
LINGO2 leucine rich repeat and Ig domain containing 2 0.0137933
WAC WW domain containing adaptor with coiled-coil 0.0137823
EIF1 eukaryotic translation initiation factor 1 0.0136469
ADAM19 ADAM metallopeptidase domain 19 0.0134566
PODXL podocalyxin-like 0.0134302
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0133743
SFTPA2 surfactant protein A2 0.013288
IGFBP5 insulin-like growth factor binding protein 5 0.0132646
AHNAK2 AHNAK nucleoprotein 2 0.0132425
ATP2C1 ATPase, Ca++ transporting, type 2C, member 1 0.0131862
SRRM2 serine/arginine repetitive matrix 2 0.0129038
SSBP2 single-stranded DNA binding protein 2 0.0128551
RYK receptor-like tyrosine kinase 0.0127127
SOX9 SRY (sex determining region Y)-box 9 0.0125831
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 0.0124482
XPOT exportin, tRNA 0.0123635
MYADM myeloid-associated differentiation marker 0.0122838
NT5C2 5'-nucleotidase, cytosolic II 0.0122074
CEMIP cell migration inducing protein, hyaluronan binding 0.012185
PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1 0.0119811
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0119793
APAF1 apoptotic peptidase activating factor 1 0.0117816
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) 0.0117708
FRMD5 FERM domain containing 5 0.0116991
USP9X ubiquitin specific peptidase 9, X-linked 0.0116501
ZBTB7A zinc finger and BTB domain containing 7A 0.0114734
HMGB2 high mobility group box 2 0.0114426
ZNF706 zinc finger protein 706 0.011442
CYLD cylindromatosis (turban tumor syndrome) 0.0114181
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 0.011391
RAD21 RAD21 homolog (S. pombe) 0.0112988
IL15 interleukin 15 0.0112212
FMNL2 formin-like 2 0.0111249
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.0109588
COX6C cytochrome c oxidase subunit VIc 0.0109447

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.422579
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.18475
NDRG1 N-myc downstream regulated 1 -0.166426
TRIO trio Rho guanine nucleotide exchange factor -0.134245
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.119913
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.110991
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.106557
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.104961
TIMP2 TIMP metallopeptidase inhibitor 2 -0.100277
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0942483
MAP1B microtubule-associated protein 1B -0.0845253
RTN4 reticulon 4 -0.0813489
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0808101
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0787588
SQSTM1 sequestosome 1 -0.0759713
TPM4 tropomyosin 4 -0.0742938
LOC112694756 uncharaterized LOC112694756 -0.0693032
FNDC3B fibronectin type III domain containing 3B -0.0689681
UBC ubiquitin C -0.0668397
RUNX1 runt-related transcription factor 1 -0.0636479
RAB7A RAB7A, member RAS oncogene family -0.0625079
IGFBP3 insulin-like growth factor binding protein 3 -0.0620913
PDIA3 protein disulfide isomerase family A, member 3 -0.0614462
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0614214
DCLK2 doublecortin-like kinase 2 -0.0549883
EGFR epidermal growth factor receptor -0.0545813
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0535493
LDHA lactate dehydrogenase A -0.0526014
FOSL1 FOS-like antigen 1 -0.0519385
LOXL2 lysyl oxidase-like 2 -0.051697
ANXA2 annexin A2 -0.0508161
RND3 Rho family GTPase 3 -0.0508129
HS3ST3A1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 -0.0506588
S100A10 S100 calcium binding protein A10 -0.0483405
HDAC9 histone deacetylase 9 -0.0482334
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit -0.0481187
CD99 CD99 molecule -0.0480686
GOLGA4 golgin A4 -0.0480453
PKM pyruvate kinase, muscle -0.0477416
BSG basigin (Ok blood group) -0.0473967
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0470073
POTEF POTE ankyrin domain family, member F -0.046881
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0459991
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.045909
ADAM9 ADAM metallopeptidase domain 9 -0.0457206
RHOBTB3 Rho-related BTB domain containing 3 -0.0455051
MEIS2 Meis homeobox 2 -0.0453776
HILPDA hypoxia inducible lipid droplet-associated -0.0449565
FTL ferritin, light polypeptide -0.0447409
VEGFA vascular endothelial growth factor A -0.043918
LOX lysyl oxidase -0.0433614
CENPF centromere protein F, 350/400kDa -0.0420538
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.041769
DLG1 discs, large homolog 1 (Drosophila) -0.0414618
USP34 ubiquitin specific peptidase 34 -0.0405796
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0401208
SLC39A11 solute carrier family 39, member 11 -0.0398503
TENM3 teneurin transmembrane protein 3 -0.0398184
TAOK1 TAO kinase 1 -0.0389451
HSPA9 heat shock 70kDa protein 9 (mortalin) -0.038922
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0388048
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 -0.0387314
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0382769
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0382126
NAV2 neuron navigator 2 -0.0376786
RNMT RNA (guanine-7-) methyltransferase -0.0375762
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0374523
KDM5B lysine (K)-specific demethylase 5B -0.0371992
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0370333
CCND1 cyclin D1 -0.0365173
IARS1 isoleucyl-tRNA synthetase 1 -0.036492
ADM adrenomedullin -0.0364575
GOLGB1 golgin B1 -0.0360706
JMJD1C jumonji domain containing 1C -0.0356459
SLC39A14 solute carrier family 39 (zinc transporter), member 14 -0.0354957
MBNL2 muscleblind-like splicing regulator 2 -0.0349984
EGR1 early growth response 1 -0.0349469
CDH13 cadherin 13 -0.0341123
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 -0.0340496
RNF168 ring finger protein 168, E3 ubiquitin protein ligase -0.0340039
CD44 CD44 molecule (Indian blood group) -0.0338475
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0338027
PTPN14 protein tyrosine phosphatase, non-receptor type 14 -0.0336448
ANKRD11 ankyrin repeat domain 11 -0.0334614
MEF2D myocyte enhancer factor 2D -0.0332595
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.0332292
MYO9B myosin IXB -0.0331847
ZMYND8 zinc finger, MYND-type containing 8 -0.0329458
VCL vinculin -0.0328514
EPAS1 endothelial PAS domain protein 1 -0.0324634
SETD5 SET domain containing 5 -0.0324242
RPL28 ribosomal protein L28 -0.0320097
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0319877
UGCG UDP-glucose ceramide glucosyltransferase -0.0318377
TXNRD1 thioredoxin reductase 1 -0.0312539
ANXA5 annexin A5 -0.0311317
ZNF292 zinc finger protein 292 -0.0309423
CD109 CD109 molecule -0.0307893
ACBD3 acyl-CoA binding domain containing 3 -0.0306689
ACTN4 actinin, alpha 4 -0.0304897