Afatinib_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Afatinib perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Afatinib_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.171594
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.126139
PTMA prothymosin, alpha 0.0995057
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0971992
CALR calreticulin 0.0833404
RPS2 ribosomal protein S2 0.0762809
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0755854
RPS12 ribosomal protein S12 0.0645704
NAP1L1 nucleosome assembly protein 1-like 1 0.0638321
TPM3 tropomyosin 3 0.0615481
TMEM41B transmembrane protein 41B 0.0613328
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.0592945
CANX calnexin 0.0582178
MMP12 matrix metallopeptidase 12 0.0575481
SET SET nuclear proto-oncogene 0.0520479
AKAP12 A kinase (PRKA) anchor protein 12 0.0509976
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0495489
TUBA1B tubulin, alpha 1b 0.0450233
PDIA6 protein disulfide isomerase family A, member 6 0.0440315
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 0.0438031
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0433887
HDGF hepatoma-derived growth factor 0.0431541
MKI67 marker of proliferation Ki-67 0.042601
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0424172
XPOT exportin, tRNA 0.0407644
ENO1 enolase 1, (alpha) 0.0391763
TPM4 tropomyosin 4 0.0383555
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0375128
KTN1 kinectin 1 (kinesin receptor) 0.0371188
VIM vimentin 0.0370452
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.036754
ARID1B AT rich interactive domain 1B (SWI1-like) 0.0358183
JMJD1C jumonji domain containing 1C 0.0345856
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0342719
ERRFI1 ERBB receptor feedback inhibitor 1 0.0339392
XPO1 exportin 1 0.0339387
SPATS2 spermatogenesis associated, serine-rich 2 0.0326745
MACF1 microtubule-actin crosslinking factor 1 0.0326687
PDGFC platelet derived growth factor C 0.0326538
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.0325387
RTN4 reticulon 4 0.0320226
DSPP dentin sialophosphoprotein 0.0310393
NIBAN1 niban apoptosis regulator 1 0.0310261
PCBP2 poly(rC) binding protein 2 0.0308402
HSPA8 heat shock 70kDa protein 8 0.0306945
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0306327
RPS8 ribosomal protein S8 0.0293081
ANK2 ankyrin 2, neuronal 0.0288926
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0287109
KIF5B kinesin family member 5B 0.0269957
FNIP1 folliculin interacting protein 1 0.0269139
CLTC clathrin, heavy chain (Hc) 0.0268734
NFE2L1 nuclear factor, erythroid 2-like 1 0.0267848
TPT1 tumor protein, translationally-controlled 1 0.0264184
PDIA3 protein disulfide isomerase family A, member 3 0.0263301
BCHE butyrylcholinesterase 0.0263136
NRXN3 neurexin 3 0.0261896
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0259193
EEF2 eukaryotic translation elongation factor 2 0.0257613
MED13L mediator complex subunit 13-like 0.0254883
KPNB1 karyopherin (importin) beta 1 0.0253265
CENPF centromere protein F, 350/400kDa 0.0249214
IFIH1 interferon induced with helicase C domain 1 0.0246795
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.0246621
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0243589
MCL1 myeloid cell leukemia 1 0.024344
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.024322
SFTPA2 surfactant protein A2 0.0241728
RPS7 ribosomal protein S7 0.0240242
SRRM2 serine/arginine repetitive matrix 2 0.0239994
NEGR1 neuronal growth regulator 1 0.0237159
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0232347
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0232148
HSPA4 heat shock 70kDa protein 4 0.0229236
RPL26 ribosomal protein L26 0.0228787
SSR1 signal sequence receptor, alpha 0.0225143
NR2F1 nuclear receptor subfamily 2, group F, member 1 0.0223295
RPS3 ribosomal protein S3 0.0221736
DENND5B DENN/MADD domain containing 5B 0.0220863
VMP1 vacuole membrane protein 1 0.0220033
ANKRD36 ankyrin repeat domain 36 0.0216359
PA2G4 proliferation-associated 2G4, 38kDa 0.0216358
SESN2 sestrin 2 0.0216337
USP14 ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase) 0.0216316
RPS18 ribosomal protein S18 0.02141
SMC1A structural maintenance of chromosomes 1A 0.0213297
MYADM myeloid-associated differentiation marker 0.0209664
MAP1LC3B microtubule-associated protein 1 light chain 3 beta 0.02087
TXNRD1 thioredoxin reductase 1 0.0207197
EPRS1 glutamyl-prolyl-tRNA synthetase 1 0.0205314
EZR ezrin 0.0203118
EIF4B eukaryotic translation initiation factor 4B 0.0202957
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0202379
MYH9 myosin, heavy chain 9, non-muscle 0.0202234
SAMD4A sterile alpha motif domain containing 4A 0.0201646
ATP9A ATPase, class II, type 9A 0.0200066
MAP4 microtubule-associated protein 4 0.0198116
TPI1 triosephosphate isomerase 1 0.0194801
PNN pinin, desmosome associated protein 0.0194766
RSL1D1 ribosomal L1 domain containing 1 0.019338

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.161352
AREG amphiregulin -0.15868
PCDH7 protocadherin 7 -0.157228
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.104603
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0969772
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0964565
NLGN1 neuroligin 1 -0.0958457
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0943977
CELF2 CUGBP, Elav-like family member 2 -0.0790863
PDE4D phosphodiesterase 4D, cAMP-specific -0.0743911
FTL ferritin, light polypeptide -0.0712682
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.068385
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0581449
BIRC3 baculoviral IAP repeat containing 3 -0.0552447
PPP6R3 protein phosphatase 6, regulatory subunit 3 -0.0518158
BIRC6 baculoviral IAP repeat containing 6 -0.0517894
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0503206
ZNF804A zinc finger protein 804A -0.0500309
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0497763
INTS6 integrator complex subunit 6 -0.0495166
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0490814
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0481381
RPL23 ribosomal protein L23 -0.0475946
ADGRG6 adhesion G protein-coupled receptor G6 -0.0475539
CCN2 cellular communication network factor 2 -0.0461491
TAS2R14 taste receptor, type 2, member 14 -0.0457759
EDN1 endothelin 1 -0.0451494
SYT1 synaptotagmin I -0.0432744
RPS19 ribosomal protein S19 -0.0431986
POU2F1 POU class 2 homeobox 1 -0.0423984
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0400314
LOC112694756 uncharaterized LOC112694756 -0.0391001
YAP1 Yes-associated protein 1 -0.0382775
RPL36 ribosomal protein L36 -0.0379053
RERE arginine-glutamic acid dipeptide (RE) repeats -0.0376146
EIF4A2 eukaryotic translation initiation factor 4A2 -0.0375347
PRIM2 primase, DNA, polypeptide 2 (58kDa) -0.0373069
RPL28 ribosomal protein L28 -0.0370792
RPL27A ribosomal protein L27a -0.0368712
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa -0.036265
NF1 neurofibromin 1 -0.0357291
RAPGEF6 Rap guanine nucleotide exchange factor (GEF) 6 -0.0354873
USP34 ubiquitin specific peptidase 34 -0.0354228
CCDC88A coiled-coil domain containing 88A -0.0353024
RPL19 ribosomal protein L19 -0.03488
SMC4 structural maintenance of chromosomes 4 -0.0348102
GPHN gephyrin -0.0340625
MARCHF6 membrane associated ring-CH-type finger 6 -0.0338335
ELP4 elongator acetyltransferase complex subunit 4 -0.0336946
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0333635
NABP1 nucleic acid binding protein 1 -0.0329213
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0326588
CNRIP1 cannabinoid receptor interacting protein 1 -0.0325096
RAB7A RAB7A, member RAS oncogene family -0.0323146
ADIPOR2 adiponectin receptor 2 -0.0321894
LRRTM4 leucine rich repeat transmembrane neuronal 4 -0.032153
RPLP1 ribosomal protein, large, P1 -0.0321476
FBXO11 F-box protein 11 -0.0317938
CUBN cubilin (intrinsic factor-cobalamin receptor) -0.0317674
GSK3B glycogen synthase kinase 3 beta -0.0317463
ZBTB20 zinc finger and BTB domain containing 20 -0.0316129
CARD16 caspase recruitment domain family, member 16 -0.0310168
PPP1R10 protein phosphatase 1, regulatory subunit 10 -0.0308083
CCND1 cyclin D1 -0.0307881
FUS FUS RNA binding protein -0.0303212
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0293972
PCNP PEST proteolytic signal containing nuclear protein -0.0293478
RPLP0 ribosomal protein, large, P0 -0.0291969
ZNF638 zinc finger protein 638 -0.0291295
SMCHD1 structural maintenance of chromosomes flexible hinge domain containing 1 -0.0288078
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0287877
NUP98 nucleoporin 98kDa -0.0286404
MON2 MON2 homolog (S. cerevisiae) -0.0284353
PFN1 profilin 1 -0.0284182
ABI2 abl-interactor 2 -0.0284041
CNOT1 CCR4-NOT transcription complex, subunit 1 -0.0282811
RPS20 ribosomal protein S20 -0.0282672
EDARADD EDAR-associated death domain -0.028071
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.028009
SPDYA speedy/RINGO cell cycle regulator family member A -0.0278289
TRA2B transformer 2 beta homolog (Drosophila) -0.0275381
RPS4X ribosomal protein S4, X-linked -0.027525
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0271825
BPTF bromodomain PHD finger transcription factor -0.0271689
ATP11A ATPase, class VI, type 11A -0.0268983
DKK1 dickkopf WNT signaling pathway inhibitor 1 -0.0266674
TMEM131 transmembrane protein 131 -0.0266287
RPS24 ribosomal protein S24 -0.0266269
ERBIN erbb2 interacting protein -0.0264896
CXADR coxsackie virus and adenovirus receptor -0.0263166
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0262935
EGR1 early growth response 1 -0.025967
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain -0.025543
POLA1 polymerase (DNA directed), alpha 1, catalytic subunit -0.0254235
MTAP methylthioadenosine phosphorylase -0.0254004
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0253257
RPS5 ribosomal protein S5 -0.0252084
ECT2 epithelial cell transforming 2 -0.0251785
TSC22D2 TSC22 domain family, member 2 -0.0250534
WDR26 WD repeat domain 26 -0.0248813