Afatinib_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Afatinib perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Afatinib_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
RPS6 ribosomal protein S6 0.118282
FTH1 ferritin, heavy polypeptide 1 0.110687
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.0888935
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0789514
RPS2 ribosomal protein S2 0.076925
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.0679975
PSD3 pleckstrin and Sec7 domain containing 3 0.0658803
SLC39A8 solute carrier family 39 (zinc transporter), member 8 0.0646218
GDA guanine deaminase 0.0643899
RPS12 ribosomal protein S12 0.0562724
GRAMD1B GRAM domain containing 1B 0.0548123
NAMPT nicotinamide phosphoribosyltransferase 0.0515812
VIM vimentin 0.0499239
CTSL cathepsin L 0.0470497
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 0.0463323
TMX4 thioredoxin-related transmembrane protein 4 0.0450181
MFF mitochondrial fission factor 0.0425707
CD109 CD109 molecule 0.0424517
TGFBI transforming growth factor, beta-induced, 68kDa 0.0416016
RPL37A ribosomal protein L37a 0.0414244
RPL26 ribosomal protein L26 0.0411007
RACK1 receptor for activated C kinase 1 0.0400603
RPS8 ribosomal protein S8 0.0394099
RAB3B RAB3B, member RAS oncogene family 0.0389385
STC1 stanniocalcin 1 0.0377447
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0361753
B2M beta-2-microglobulin 0.0360863
CENPF centromere protein F, 350/400kDa 0.0360847
RPS19 ribosomal protein S19 0.0352814
ZEB2 zinc finger E-box binding homeobox 2 0.0350065
IGFBP3 insulin-like growth factor binding protein 3 0.0346826
PYGL phosphorylase, glycogen, liver 0.0343683
LAMB1 laminin, beta 1 0.0336577
EPB41L3 erythrocyte membrane protein band 4.1-like 3 0.0335807
SOX4 SRY (sex determining region Y)-box 4 0.0334292
BNIP3 BCL2/adenovirus E1B 19kDa interacting protein 3 0.0330837
MSN moesin 0.0324605
RPS27 ribosomal protein S27 0.0324218
SH3KBP1 SH3-domain kinase binding protein 1 0.0319043
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 0.0311883
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 0.0309384
MKI67 marker of proliferation Ki-67 0.0308646
HSPA8 heat shock 70kDa protein 8 0.0307818
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0304873
RPS17 ribosomal protein S17 0.030391
RPL3 ribosomal protein L3 0.0302413
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0300906
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0299885
RPL36A ribosomal protein L36a 0.0299597
HLA-A major histocompatibility complex, class I, A 0.0297246
SFTPA2 surfactant protein A2 0.0291671
TBXT T-box transcription factor T 0.0284258
RPL11 ribosomal protein L11 0.0282346
TNFRSF19 tumor necrosis factor receptor superfamily, member 19 0.0273935
COL8A1 collagen, type VIII, alpha 1 0.0273376
RPL37 ribosomal protein L37 0.0270951
RPS14 ribosomal protein S14 0.0269036
NTN4 netrin 4 0.0268163
RPS3 ribosomal protein S3 0.0267712
RPL31 ribosomal protein L31 0.0265893
SRRM2 serine/arginine repetitive matrix 2 0.0261546
KTN1 kinectin 1 (kinesin receptor) 0.025651
RPL7 ribosomal protein L7 0.0252109
EIF1 eukaryotic translation initiation factor 1 0.0247875
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0247111
TMSB4X thymosin beta 4, X-linked 0.0240244
ESM1 endothelial cell-specific molecule 1 0.0238173
RPS23 ribosomal protein S23 0.0236863
RPL9 ribosomal protein L9 0.0236674
INHBA inhibin, beta A 0.0235982
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0234637
DISP1 dispatched homolog 1 (Drosophila) 0.0232973
RPL21 ribosomal protein L21 0.0232913
GPRIN3 GPRIN family member 3 0.0227555
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0226582
RPL35A ribosomal protein L35a 0.0223371
AKAP12 A kinase (PRKA) anchor protein 12 0.0222894
SLK STE20-like kinase 0.0222674
RPL7A ribosomal protein L7a 0.0217532
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0216152
TPI1 triosephosphate isomerase 1 0.0215908
RPL36 ribosomal protein L36 0.0205745
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0204426
DGKD diacylglycerol kinase, delta 130kDa 0.0204046
ZBTB38 zinc finger and BTB domain containing 38 0.0201646
CD44 CD44 molecule (Indian blood group) 0.0196738
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0193326
RPS13 ribosomal protein S13 0.0192391
CLU clusterin 0.0191438
STC2 stanniocalcin 2 0.0187651
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0187546
UBXN4 UBX domain protein 4 0.0187165
TXNIP thioredoxin interacting protein 0.0187151
PDLIM5 PDZ and LIM domain 5 0.0186819
NRCAM neuronal cell adhesion molecule 0.0186493
HADHA hydroxyacyl-CoA dehydrogenase/3-ketoacyl-CoA thiolase/enoyl-CoA hydratase (trifunctional protein), alpha subunit 0.0181653
ATF4 activating transcription factor 4 0.0181166
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) 0.0177975
BCAR3 breast cancer anti-estrogen resistance 3 0.0175843
RPL17-C18ORF32 RPL17-C18orf32 readthrough 0.0174688

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.356153
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.229754
PDE3A phosphodiesterase 3A, cGMP-inhibited -0.13779
FN1 fibronectin 1 -0.128742
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.124326
PDE4D phosphodiesterase 4D, cAMP-specific -0.123677
UBC ubiquitin C -0.111588
LIMCH1 LIM and calponin homology domains 1 -0.104078
TM4SF1 transmembrane 4 L six family member 1 -0.10361
CANX calnexin -0.0917018
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0850105
VCL vinculin -0.0782567
TMSB10 thymosin beta 10 -0.0760867
SOD2 superoxide dismutase 2, mitochondrial -0.0699139
SPAG9 sperm associated antigen 9 -0.0685305
OGA O-GlcNAcase -0.065861
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0656916
EFNA5 ephrin-A5 -0.0647446
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0642066
P4HB prolyl 4-hydroxylase, beta polypeptide -0.063724
PDIA4 protein disulfide isomerase family A, member 4 -0.063155
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0630985
RPS27A ribosomal protein S27a -0.0630355
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0627071
CDH13 cadherin 13 -0.059813
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0582774
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0572497
DST dystonin -0.056736
PDE10A phosphodiesterase 10A -0.0555754
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0548172
ASPH aspartate beta-hydroxylase -0.0514389
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0506208
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.0499163
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0497144
BIRC6 baculoviral IAP repeat containing 6 -0.047621
ACTG1 actin gamma 1 -0.0463041
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 -0.0457039
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0454076
AHNAK AHNAK nucleoprotein -0.0452686
MARCHF1 membrane associated ring-CH-type finger 1 -0.0450642
RAB1A RAB1A, member RAS oncogene family -0.0449716
FNDC3B fibronectin type III domain containing 3B -0.0448801
MORF4L2 mortality factor 4 like 2 -0.0440983
TGFBR1 transforming growth factor, beta receptor 1 -0.043224
INTS6 integrator complex subunit 6 -0.0424848
COPA coatomer protein complex, subunit alpha -0.041868
NT5C2 5'-nucleotidase, cytosolic II -0.0418176
NAP1L1 nucleosome assembly protein 1-like 1 -0.0415079
PRELID2 PRELI domain containing 2 -0.0414137
DENND1A DENN/MADD domain containing 1A -0.041273
MYOF myoferlin -0.0403448
PTPRM protein tyrosine phosphatase, receptor type, M -0.0403187
ADGRD1 adhesion G protein-coupled receptor D1 -0.0402127
KDM3A lysine (K)-specific demethylase 3A -0.0396797
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0396269
DPP10 dipeptidyl-peptidase 10 (non-functional) -0.0394928
ELL2 elongation factor, RNA polymerase II, 2 -0.0393223
PGK1 phosphoglycerate kinase 1 -0.0392764
LDHA lactate dehydrogenase A -0.0391601
PRKN parkin RBR E3 ubiquitin protein ligase -0.0382877
CTBP2 C-terminal binding protein 2 -0.0377608
ENO1 enolase 1, (alpha) -0.0377543
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0370393
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.036413
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0360533
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 -0.0357986
SEC31A SEC31 homolog A (S. cerevisiae) -0.035287
PDIA6 protein disulfide isomerase family A, member 6 -0.0351478
LSAMP limbic system-associated membrane protein -0.0347341
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0344734
PDIA3 protein disulfide isomerase family A, member 3 -0.0342318
HDLBP high density lipoprotein binding protein -0.0341961
SPDYA speedy/RINGO cell cycle regulator family member A -0.0339654
CAMTA1 calmodulin binding transcription activator 1 -0.0337378
CALR calreticulin -0.0337208
IFRD1 interferon-related developmental regulator 1 -0.0337004
MAML3 mastermind-like 3 (Drosophila) -0.033516
NCOA7 nuclear receptor coactivator 7 -0.0334396
RBM39 RNA binding motif protein 39 -0.0329595
TRA2A transformer 2 alpha homolog (Drosophila) -0.0327875
HELZ helicase with zinc finger -0.0326504
WDR45B WD repeat domain 45B -0.0324245
USP34 ubiquitin specific peptidase 34 -0.0320698
NBAS neuroblastoma amplified sequence -0.0319884
EPHA4 EPH receptor A4 -0.0318513
CALU calumenin -0.0318226
LMAN1 lectin, mannose-binding, 1 -0.0317122
ZFAND3 zinc finger, AN1-type domain 3 -0.0317072
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0316373
KMT2C lysine (K)-specific methyltransferase 2C -0.0312723
SLC38A2 solute carrier family 38, member 2 -0.0309853
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0307582
PLCB4 phospholipase C, beta 4 -0.0305114
TRIO trio Rho guanine nucleotide exchange factor -0.0300625
RAP1B RAP1B, member of RAS oncogene family -0.0300188
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 -0.0299336
RPS24 ribosomal protein S24 -0.0298025
SRPK2 SRSF protein kinase 2 -0.0295882
LAMA1 laminin, alpha 1 -0.0294305
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0293852