Afatinib_SW 1088 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Afatinib perturbation in SW 1088 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Afatinib_SW 1088 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTH1 ferritin, heavy polypeptide 1 0.184506
ERRFI1 ERBB receptor feedback inhibitor 1 0.149561
STC1 stanniocalcin 1 0.103047
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.085685
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0776289
MACF1 microtubule-actin crosslinking factor 1 0.0734702
NRXN3 neurexin 3 0.0722619
TGFBI transforming growth factor, beta-induced, 68kDa 0.0592047
CD44 CD44 molecule (Indian blood group) 0.0571282
ELL2 elongation factor, RNA polymerase II, 2 0.0554374
B2M beta-2-microglobulin 0.052426
ZBTB20 zinc finger and BTB domain containing 20 0.0507291
ANTXR2 anthrax toxin receptor 2 0.0494883
HLA-A major histocompatibility complex, class I, A 0.049403
ALK anaplastic lymphoma receptor tyrosine kinase 0.0477462
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0473145
GOLGB1 golgin B1 0.0471901
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0464887
KYNU kynureninase 0.0459415
NDRG1 N-myc downstream regulated 1 0.0445302
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0433326
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0430051
SFTPA2 surfactant protein A2 0.0422716
MYADM myeloid-associated differentiation marker 0.0416867
RNF145 ring finger protein 145 0.0409277
IGFBP7 insulin-like growth factor binding protein 7 0.0390859
MT2A metallothionein 2A 0.0380072
ASPH aspartate beta-hydroxylase 0.0375769
PSD3 pleckstrin and Sec7 domain containing 3 0.0369864
PTK2 protein tyrosine kinase 2 0.036436
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0362553
KMT2E lysine (K)-specific methyltransferase 2E 0.0360694
TMF1 TATA element modulatory factor 1 0.0360636
EFNA5 ephrin-A5 0.0355637
TPI1 triosephosphate isomerase 1 0.0351936
IL6 interleukin 6 0.0339053
RPS8 ribosomal protein S8 0.0337049
RPS2 ribosomal protein S2 0.0335522
PUM2 pumilio RNA-binding family member 2 0.0328702
TOP1 topoisomerase (DNA) I 0.0323787
N4BP2L2 NEDD4 binding protein 2-like 2 0.032164
ARRDC3 arrestin domain containing 3 0.0321163
PDIA6 protein disulfide isomerase family A, member 6 0.0320604
ZSWIM6 zinc finger, SWIM-type containing 6 0.031098
BHLHE40 basic helix-loop-helix family, member e40 0.0306461
CAPN2 calpain 2, (m/II) large subunit 0.0306432
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1 0.0305683
EDIL3 EGF-like repeats and discoidin I-like domains 3 0.0303494
METTL15 methyltransferase like 15 0.0299308
TTC3 tetratricopeptide repeat domain 3 0.0294045
STK10 serine/threonine kinase 10 0.0290985
PRKRIP1 PRKR interacting protein 1 (IL11 inducible) 0.0290883
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0289494
WWTR1 WW domain containing transcription regulator 1 0.0285773
DOCK1 dedicator of cytokinesis 1 0.0285575
WNT5A wingless-type MMTV integration site family, member 5A 0.0284728
ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 0.0283942
LHFPL2 lipoma HMGIC fusion partner-like 2 0.028121
CCDC14 coiled-coil domain containing 14 0.0281169
TMEM165 transmembrane protein 165 0.0280088
ANKRD36C ankyrin repeat domain 36C 0.0276777
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.0271331
ATP2C1 ATPase, Ca++ transporting, type 2C, member 1 0.0270369
CD59 CD59 molecule, complement regulatory protein 0.0267342
CA12 carbonic anhydrase XII 0.0265784
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0265277
RND3 Rho family GTPase 3 0.0262665
RABGAP1 RAB GTPase activating protein 1 0.0260413
PARD3 par-3 family cell polarity regulator 0.0259093
EEF2 eukaryotic translation elongation factor 2 0.0258252
TLN1 talin 1 0.0256815
SYNE2 spectrin repeat containing, nuclear envelope 2 0.025657
PRPF40A PRP40 pre-mRNA processing factor 40 homolog A (S. cerevisiae) 0.0255873
PRKN parkin RBR E3 ubiquitin protein ligase 0.0255024
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0254221
PLAUR plasminogen activator, urokinase receptor 0.0253002
TNIP1 TNFAIP3 interacting protein 1 0.0249626
IRAK2 interleukin-1 receptor-associated kinase 2 0.0249455
PTGES2 prostaglandin E synthase 2 0.0248485
BBS9 Bardet-Biedl syndrome 9 0.0246727
PDXDC1 pyridoxal-dependent decarboxylase domain containing 1 0.024491
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0244395
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0244239
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.024415
PCBP2 poly(rC) binding protein 2 0.024317
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0240764
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 0.0239834
COPA coatomer protein complex, subunit alpha 0.0238078
PGM3 phosphoglucomutase 3 0.0237178
PHF14 PHD finger protein 14 0.0231934
KDM5C lysine (K)-specific demethylase 5C 0.02314
COG5 component of oligomeric golgi complex 5 0.02313
LYSMD3 LysM, putative peptidoglycan-binding, domain containing 3 0.0231291
USP47 ubiquitin specific peptidase 47 0.0228018
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0227831
RAP1A RAP1A, member of RAS oncogene family 0.0226913
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) 0.0226112
GLIS3 GLIS family zinc finger 3 0.0224285
MICAL3 microtubule associated monooxygenase, calponin and LIM domain containing 3 0.0223678
USPL1 ubiquitin specific peptidase like 1 0.0223637

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.25598
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.144344
HLA-B major histocompatibility complex, class I, B -0.0914729
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0884667
FN1 fibronectin 1 -0.0834219
TMSB10 thymosin beta 10 -0.0805503
VIM vimentin -0.0742534
TENT5A terminal nucleotidyltransferase 5A -0.0737925
CALD1 caldesmon 1 -0.0730538
COL6A3 collagen, type VI, alpha 3 -0.067952
CALU calumenin -0.066825
POTEF POTE ankyrin domain family, member F -0.0656378
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0635283
F3 coagulation factor III (thromboplastin, tissue factor) -0.0631594
SOD2 superoxide dismutase 2, mitochondrial -0.0602244
RBM39 RNA binding motif protein 39 -0.0600857
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0599774
VCL vinculin -0.0598669
SDC4 syndecan 4 -0.0581506
HIBADH 3-hydroxyisobutyrate dehydrogenase -0.0578618
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0565683
TRIO trio Rho guanine nucleotide exchange factor -0.0553367
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0549235
ARF4 ADP-ribosylation factor 4 -0.0548189
HYCC1 hyccin PI4KA lipid kinase complex subunit 1 -0.052176
CAV1 caveolin 1, caveolae protein, 22kDa -0.051912
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0511675
WTAP Wilms tumor 1 associated protein -0.0491926
MYH9 myosin, heavy chain 9, non-muscle -0.0490407
FUS FUS RNA binding protein -0.0487765
HLA-C major histocompatibility complex, class I, C -0.0460242
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0454808
S100A6 S100 calcium binding protein A6 -0.0451231
UBE2H ubiquitin-conjugating enzyme E2H -0.0448526
LUC7L2 LUC7-like 2 (S. cerevisiae) -0.0445881
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0436046
TPT1 tumor protein, translationally-controlled 1 -0.0434285
PRRC1 proline-rich coiled-coil 1 -0.0428861
LDHA lactate dehydrogenase A -0.0425411
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1 -0.0421777
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.042083
BBX bobby sox homolog (Drosophila) -0.0415696
ZMYND8 zinc finger, MYND-type containing 8 -0.041469
TRA2A transformer 2 alpha homolog (Drosophila) -0.0411211
FBXO11 F-box protein 11 -0.0408706
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0400609
PGK1 phosphoglycerate kinase 1 -0.0391338
ACTG1 actin gamma 1 -0.0389164
ADM adrenomedullin -0.0386112
COL1A1 collagen, type I, alpha 1 -0.0385833
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0384912
NAMPT nicotinamide phosphoribosyltransferase -0.0384443
KDM5B lysine (K)-specific demethylase 5B -0.0382629
FTL ferritin, light polypeptide -0.037923
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0377199
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 -0.0375775
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0374067
CD109 CD109 molecule -0.0371611
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0370596
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0365208
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 -0.0357149
SLC16A1 solute carrier family 16 (monocarboxylate transporter), member 1 -0.0356131
QKI QKI, KH domain containing, RNA binding -0.0355697
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0355298
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0354204
SPAG9 sperm associated antigen 9 -0.0353767
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase -0.0347534
TUBB tubulin, beta class I -0.0344107
UBC ubiquitin C -0.0339245
NOP58 NOP58 ribonucleoprotein -0.0339101
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0336014
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0333463
SOCS5 suppressor of cytokine signaling 5 -0.0330395
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme -0.0330113
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase -0.0328707
IARS1 isoleucyl-tRNA synthetase 1 -0.0328447
TM9SF3 transmembrane 9 superfamily member 3 -0.0327621
IFRD1 interferon-related developmental regulator 1 -0.0326774
TPM4 tropomyosin 4 -0.0326204
LUC7L3 LUC7-like 3 (S. cerevisiae) -0.0325575
CAMTA1 calmodulin binding transcription activator 1 -0.0325155
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0323377
WSB1 WD repeat and SOCS box containing 1 -0.0322756
SEPTIN2 septin 2 -0.0322603
FAM20C family with sequence similarity 20, member C -0.032228
MATR3 matrin 3 -0.0322128
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0321735
TCF12 transcription factor 12 -0.0321131
HPCAL1 hippocalcin-like 1 -0.0320282
TPD52 tumor protein D52 -0.0319294
PKM pyruvate kinase, muscle -0.0319198
NRG1 neuregulin 1 -0.0318517
RPS12 ribosomal protein S12 -0.0318215
GNAS GNAS complex locus -0.0316087
TFPI2 tissue factor pathway inhibitor 2 -0.0315022
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0314466
PNISR PNN-interacting serine/arginine-rich protein -0.0313619
GLIPR1 GLI pathogenesis-related 1 -0.0313323
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0312869
SPDYA speedy/RINGO cell cycle regulator family member A -0.0309365