Allantoin_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Allantoin perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Allantoin_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LCN2 lipocalin 2 0.103896
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.0965024
ZMYND8 zinc finger, MYND-type containing 8 0.0923966
STS steroid sulfatase (microsomal), isozyme S 0.0782703
FTH1 ferritin, heavy polypeptide 1 0.0778493
PTBP3 polypyrimidine tract binding protein 3 0.0728357
C6ORF132 chromosome 6 open reading frame 132 0.0700009
PKM pyruvate kinase, muscle 0.0637033
EPSTI1 epithelial stromal interaction 1 (breast) 0.0586027
FNDC3B fibronectin type III domain containing 3B 0.0578523
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0572683
IFNGR1 interferon gamma receptor 1 0.057182
MT2A metallothionein 2A 0.0569514
ERBIN erbb2 interacting protein 0.0552052
B2M beta-2-microglobulin 0.0528168
AREG amphiregulin 0.0520322
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.050848
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0500571
RAD51B RAD51 paralog B 0.049913
CTNND1 catenin (cadherin-associated protein), delta 1 0.0497602
BICRAL BICRA like chromatin remodeling complex associated protein 0.0497037
LIMA1 LIM domain and actin binding 1 0.0488347
STK24 serine/threonine kinase 24 0.0487248
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0482328
MAP7 microtubule-associated protein 7 0.047897
BCL2L1 BCL2-like 1 0.0462632
SSH2 slingshot protein phosphatase 2 0.0432471
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0426152
VMP1 vacuole membrane protein 1 0.0424439
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.042126
MYO10 myosin X 0.041165
AKAP13 A kinase (PRKA) anchor protein 13 0.0408179
EPB41L1 erythrocyte membrane protein band 4.1-like 1 0.0402882
TRIO trio Rho guanine nucleotide exchange factor 0.040014
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.0399679
ARHGAP26 Rho GTPase activating protein 26 0.0398749
SIPA1L2 signal-induced proliferation-associated 1 like 2 0.0378875
RNF43 ring finger protein 43 0.0378568
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.0376684
YAP1 Yes-associated protein 1 0.0376584
DIAPH1 diaphanous-related formin 1 0.0375165
TRERF1 transcriptional regulating factor 1 0.0370918
TMC5 transmembrane channel-like 5 0.0370376
ARGLU1 arginine and glutamate rich 1 0.0363548
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0362808
FAT1 FAT atypical cadherin 1 0.0362616
N4BP2L2 NEDD4 binding protein 2-like 2 0.0360871
DNM2 dynamin 2 0.0355346
PRKCA protein kinase C, alpha 0.0351526
NCOR2 nuclear receptor corepressor 2 0.0351155
EGLN3 egl-9 family hypoxia-inducible factor 3 0.0349955
ADAM10 ADAM metallopeptidase domain 10 0.0341309
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0332047
SPINT1 serine peptidase inhibitor, Kunitz type 1 0.0331672
ASPH aspartate beta-hydroxylase 0.0331168
SPRED1 sprouty-related, EVH1 domain containing 1 0.0330774
PGK1 phosphoglycerate kinase 1 0.0328548
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0326766
NCKAP5 NCK-associated protein 5 0.0325993
SORBS1 sorbin and SH3 domain containing 1 0.0324157
MLPH melanophilin 0.0324039
VCL vinculin 0.0323993
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.0323452
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0318529
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0306462
SHB Src homology 2 domain containing adaptor protein B 0.0306014
FTL ferritin, light polypeptide 0.0305401
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0303001
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0299618
ATP10B ATPase, class V, type 10B 0.0299195
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 0.0297422
CMIP c-Maf inducing protein 0.0296727
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 0.0294876
IGFBP3 insulin-like growth factor binding protein 3 0.0294859
NRIP1 nuclear receptor interacting protein 1 0.0293916
SEPTIN9 septin 9 0.0291606
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0289838
FMN1 formin 1 0.0288197
SH3PXD2A SH3 and PX domains 2A 0.0288147
MACF1 microtubule-actin crosslinking factor 1 0.0285327
IL20RA interleukin 20 receptor, alpha 0.028489
TXNIP thioredoxin interacting protein 0.0284649
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein 0.0282028
KMT2E lysine (K)-specific methyltransferase 2E 0.0279076
SAMD12 sterile alpha motif domain containing 12 0.0278813
GSK3B glycogen synthase kinase 3 beta 0.0277692
PAN3 PAN3 poly(A) specific ribonuclease subunit 0.0277627
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.0276067
PCED1B PC-esterase domain containing 1B 0.0275416
PTK2 protein tyrosine kinase 2 0.0274802
ZFP36L1 ZFP36 ring finger protein-like 1 0.0273253
MYH9 myosin, heavy chain 9, non-muscle 0.0265406
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0265096
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0264596
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.0264086
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0263949
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0262393
SMAD3 SMAD family member 3 0.026195
OARD1 O-acyl-ADP-ribose deacylase 1 0.0260852
LPP LIM domain containing preferred translocation partner in lipoma 0.0260829

decreased expression

Symbol Name Standardized Value
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.149348
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.137827
TPT1 tumor protein, translationally-controlled 1 -0.117275
MBNL2 muscleblind-like splicing regulator 2 -0.091763
LMO7 LIM domain 7 -0.0867788
SQSTM1 sequestosome 1 -0.0824043
EZR ezrin -0.071058
IRF1 interferon regulatory factor 1 -0.0636307
CANX calnexin -0.0577851
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0554518
FOS FBJ murine osteosarcoma viral oncogene homolog -0.0536115
MORF4L2 mortality factor 4 like 2 -0.0482816
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0469672
CALR calreticulin -0.0464176
RRBP1 ribosome binding protein 1 -0.0430091
UGDH UDP-glucose 6-dehydrogenase -0.0426586
HDLBP high density lipoprotein binding protein -0.0414174
SEC31A SEC31 homolog A (S. cerevisiae) -0.0399386
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0394656
AGR2 anterior gradient 2 -0.0384192
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0380846
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.0376798
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0374326
GOLGB1 golgin B1 -0.0356527
RIGI RNA sensor RIG-I -0.0352888
AHI1 Abelson helper integration site 1 -0.0348932
RAB1A RAB1A, member RAS oncogene family -0.034053
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0334853
PDIA3 protein disulfide isomerase family A, member 3 -0.0333045
INTS6 integrator complex subunit 6 -0.0322916
RNF213 ring finger protein 213 -0.0321081
KDM3A lysine (K)-specific demethylase 3A -0.0314895
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0311323
EIF1 eukaryotic translation initiation factor 1 -0.0305269
ITPKC inositol-trisphosphate 3-kinase C -0.0301028
GOLPH3L golgi phosphoprotein 3-like -0.0300819
ARF1 ADP-ribosylation factor 1 -0.0290647
TMEM263 transmembrane protein 263 -0.0287765
SEC24D SEC24 family member D -0.0285872
GCLC glutamate-cysteine ligase, catalytic subunit -0.0279995
LMAN1 lectin, mannose-binding, 1 -0.0262707
DIAPH3 diaphanous-related formin 3 -0.0256489
SPTBN1 spectrin, beta, non-erythrocytic 1 -0.0250444
CALU calumenin -0.0249758
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0249542
GOLGA4 golgin A4 -0.0248396
ANXA1 annexin A1 -0.0240857
MKI67 marker of proliferation Ki-67 -0.0234898
SPDYA speedy/RINGO cell cycle regulator family member A -0.0234822
ERN1 endoplasmic reticulum to nucleus signaling 1 -0.0234588
TMED2 transmembrane emp24 domain trafficking protein 2 -0.0225564
COPB1 coatomer protein complex, subunit beta 1 -0.0224875
ABLIM1 actin binding LIM protein 1 -0.0223385
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 -0.0223089
ADIPOR2 adiponectin receptor 2 -0.0219709
SEC24A SEC24 family member A -0.0217651
PHACTR4 phosphatase and actin regulator 4 -0.0216028
SAMD4A sterile alpha motif domain containing 4A -0.0215683
BLZF1 basic leucine zipper nuclear factor 1 -0.0215154
MUC20 mucin 20, cell surface associated -0.0214568
CENPF centromere protein F, 350/400kDa -0.0213592
PPARGC1A peroxisome proliferator-activated receptor gamma, coactivator 1 alpha -0.0210315
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) -0.0210052
HLA-E major histocompatibility complex, class I, E -0.0209501
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0208121
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0206483
ATF6 activating transcription factor 6 -0.0203673
GOLGA2 golgin A2 -0.0203027
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 -0.0201432
OAS1 2'-5'-oligoadenylate synthetase 1, 40/46kDa -0.019416
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 -0.0193131
UBC ubiquitin C -0.0191547
APOL6 apolipoprotein L, 6 -0.019139
FOSB FBJ murine osteosarcoma viral oncogene homolog B -0.0191319
RSAD2 radical S-adenosyl methionine domain containing 2 -0.0191168
VDAC1 voltage-dependent anion channel 1 -0.0190511
HBP1 HMG-box transcription factor 1 -0.01888
PDIA4 protein disulfide isomerase family A, member 4 -0.0188577
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble) -0.0188039
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 -0.0185668
ARFGAP3 ADP-ribosylation factor GTPase activating protein 3 -0.0185512
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0185045
RAB7A RAB7A, member RAS oncogene family -0.0183706
FUS FUS RNA binding protein -0.0183341
NCOA7 nuclear receptor coactivator 7 -0.018099
SUCO SUN domain containing ossification factor -0.0180599
FDPS farnesyl diphosphate synthase -0.017607
SEC61A1 Sec61 alpha 1 subunit (S. cerevisiae) -0.0174463
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0172542
SEC22A SEC22 vesicle trafficking protein homolog A (S. cerevisiae) -0.0171073
SLC33A1 solute carrier family 33 (acetyl-CoA transporter), member 1 -0.0170166
TMCO3 transmembrane and coiled-coil domains 3 -0.0169611
BRCA2 breast cancer 2, early onset -0.016825
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0168097
CD164 CD164 molecule, sialomucin -0.0165534
GTF2B general transcription factor IIB -0.0165294
JUN jun proto-oncogene -0.0165273
SMC4 structural maintenance of chromosomes 4 -0.0164428
NAMPT nicotinamide phosphoribosyltransferase -0.01632
LCORL ligand dependent nuclear receptor corepressor-like -0.0162529