Alpelisib_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Alpelisib perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Alpelisib_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TRIO trio Rho guanine nucleotide exchange factor 0.112921
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0941199
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.077978
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0767153
CANX calnexin 0.0730255
AHNAK AHNAK nucleoprotein 0.0729468
HDAC9 histone deacetylase 9 0.0718857
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0665112
SQSTM1 sequestosome 1 0.0663786
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0660435
ANXA2 annexin A2 0.0587766
DST dystonin 0.0582342
LDHA lactate dehydrogenase A 0.0520774
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0501964
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0482645
FNDC3B fibronectin type III domain containing 3B 0.047331
FLNA filamin A, alpha 0.0428225
MYH9 myosin, heavy chain 9, non-muscle 0.0418361
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.04021
FLNB filamin B, beta 0.0393417
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.038938
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0388946
RHOBTB3 Rho-related BTB domain containing 3 0.0387567
SEPTIN9 septin 9 0.038245
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0380504
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0370456
CDH13 cadherin 13 0.0369344
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0361853
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0347283
NAV2 neuron navigator 2 0.0344587
CENPF centromere protein F, 350/400kDa 0.0336703
TPM4 tropomyosin 4 0.0335881
FSTL1 follistatin-like 1 0.0316231
MYOF myoferlin 0.0306169
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0300537
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0298699
MBNL2 muscleblind-like splicing regulator 2 0.0297826
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0284635
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0281053
DSPP dentin sialophosphoprotein 0.0280301
PLEC plectin 0.0273095
HS3ST3A1 heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1 0.026854
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0267924
CALR calreticulin 0.0266183
MB21D2 Mab-21 domain containing 2 0.0265824
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0264183
TPM3 tropomyosin 3 0.0262789
SMC4 structural maintenance of chromosomes 4 0.0262488
MPRIP myosin phosphatase Rho interacting protein 0.0261599
APP amyloid beta (A4) precursor protein 0.0258253
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0256223
AHNAK2 AHNAK nucleoprotein 2 0.0249718
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0249136
NFE2L1 nuclear factor, erythroid 2-like 1 0.0241867
RNF213 ring finger protein 213 0.0240785
RUNX1 runt-related transcription factor 1 0.0233892
SMAD3 SMAD family member 3 0.0232165
SP100 SP100 nuclear antigen 0.023205
RSAD2 radical S-adenosyl methionine domain containing 2 0.0227478
ENO1 enolase 1, (alpha) 0.0225478
CD44 CD44 molecule (Indian blood group) 0.0224489
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10 0.0222902
MACF1 microtubule-actin crosslinking factor 1 0.0222189
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0221587
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0215433
IQGAP1 IQ motif containing GTPase activating protein 1 0.0213826
EGFR epidermal growth factor receptor 0.0213004
FAT1 FAT atypical cadherin 1 0.0211411
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0211017
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0206662
PRELID2 PRELI domain containing 2 0.0206536
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0206443
ZMIZ1 zinc finger, MIZ-type containing 1 0.020623
EXT1 exostosin glycosyltransferase 1 0.0206041
ANKRD11 ankyrin repeat domain 11 0.0205662
RND3 Rho family GTPase 3 0.0205432
RPS2 ribosomal protein S2 0.0205296
SMYD3 SET and MYND domain containing 3 0.0204223
SFTPA2 surfactant protein A2 0.0200934
SMG1 SMG1 phosphatidylinositol 3-kinase-related kinase 0.0198887
NCKAP1 NCK-associated protein 1 0.0194778
VCL vinculin 0.0192669
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit 0.019259
ATXN1 ataxin 1 0.019259
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.019171
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0191645
ASPH aspartate beta-hydroxylase 0.018625
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0184596
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0184414
LHFPL2 lipoma HMGIC fusion partner-like 2 0.0184279
ADAR adenosine deaminase, RNA-specific 0.018319
SET SET nuclear proto-oncogene 0.0181613
PBX3 pre-B-cell leukemia homeobox 3 0.0181373
TLE4 transducin-like enhancer of split 4 0.0178354
ERBIN erbb2 interacting protein 0.0177302
THBS2 thrombospondin 2 0.0176851
ANKRD1 ankyrin repeat domain 1 (cardiac muscle) 0.0176481
FAM107B family with sequence similarity 107, member B 0.0176306
ZSWIM6 zinc finger, SWIM-type containing 6 0.0175944
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0175663

decreased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 -0.288202
TMSB10 thymosin beta 10 -0.266547
VIM vimentin -0.246626
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.183694
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.134689
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.101974
AKAP12 A kinase (PRKA) anchor protein 12 -0.0816803
COL8A1 collagen, type VIII, alpha 1 -0.0708309
LOX lysyl oxidase -0.0695822
PLAT plasminogen activator, tissue -0.0670334
DIRAS3 DIRAS family, GTP-binding RAS-like 3 -0.054406
COL1A2 collagen, type I, alpha 2 -0.0500042
MT2A metallothionein 2A -0.0479249
ABI3BP ABI family, member 3 (NESH) binding protein -0.0464668
NDRG1 N-myc downstream regulated 1 -0.045667
S100A6 S100 calcium binding protein A6 -0.0418943
SUCNR1 succinate receptor 1 -0.0404604
MT1X metallothionein 1X -0.0379468
FBN1 fibrillin 1 -0.0375123
PRSS23 protease, serine, 23 -0.0367312
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.03314
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0321569
FN1 fibronectin 1 -0.0313666
LMNA lamin A/C -0.0310239
S100A4 S100 calcium binding protein A4 -0.0295981
DLG1 discs, large homolog 1 (Drosophila) -0.0285024
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A -0.0281294
HLA-B major histocompatibility complex, class I, B -0.0276507
S100A10 S100 calcium binding protein A10 -0.0269991
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0261354
TAGLN2 transgelin 2 -0.026024
FTL ferritin, light polypeptide -0.0250581
FRMD4A FERM domain containing 4A -0.0244675
PFN1 profilin 1 -0.0236991
MRPS6 mitochondrial ribosomal protein S6 -0.0230129
LOXL2 lysyl oxidase-like 2 -0.0225058
MYADM myeloid-associated differentiation marker -0.0219042
PODXL podocalyxin-like -0.0215099
GARS1 glycyl-tRNA synthetase 1 -0.0213671
CD99 CD99 molecule -0.0207378
SLC38A1 solute carrier family 38, member 1 -0.0207289
GNAS GNAS complex locus -0.0201355
RPL35A ribosomal protein L35a -0.019794
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0196434
JAZF1 JAZF zinc finger 1 -0.0194381
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0192105
PLAUR plasminogen activator, urokinase receptor -0.0189926
CSTB cystatin B (stefin B) -0.0186476
LY6E lymphocyte antigen 6 complex, locus E -0.0186458
SEC61G Sec61 gamma subunit -0.0184018
SOD2 superoxide dismutase 2, mitochondrial -0.0183985
RPS19 ribosomal protein S19 -0.0175937
P4HA2 prolyl 4-hydroxylase, alpha polypeptide II -0.0175657
FLT1 fms-related tyrosine kinase 1 -0.0171235
PDIA3 protein disulfide isomerase family A, member 3 -0.0163516
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.0162375
PRRX1 paired related homeobox 1 -0.0162201
ARL15 ADP-ribosylation factor-like 15 -0.0161414
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0160294
COL1A1 collagen, type I, alpha 1 -0.0159004
KRT81 keratin 81, type II -0.0157302
BSG basigin (Ok blood group) -0.015085
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.0150549
CBX3 chromobox homolog 3 -0.0145629
ARL4C ADP-ribosylation factor-like 4C -0.0145154
ITGA5 integrin, alpha 5 (fibronectin receptor, alpha polypeptide) -0.0140808
FNDC3A fibronectin type III domain containing 3A -0.0140345
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0139396
S100A9 S100 calcium binding protein A9 -0.013789
DHRSX dehydrogenase/reductase (SDR family) X-linked -0.0137177
IFITM3 interferon induced transmembrane protein 3 -0.0135815
PPDPF pancreatic progenitor cell differentiation and proliferation factor -0.0131616
OASL 2'-5'-oligoadenylate synthetase-like -0.0130977
IGFBP6 insulin-like growth factor binding protein 6 -0.0130678
COL6A1 collagen, type VI, alpha 1 -0.0130478
FRMD5 FERM domain containing 5 -0.0128917
CDC42EP3 CDC42 effector protein (Rho GTPase binding) 3 -0.0127566
PDGFB platelet-derived growth factor beta polypeptide -0.012656
ENO2 enolase 2 (gamma, neuronal) -0.0125705
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 -0.0125134
SH3BGRL3 SH3 domain binding glutamate-rich protein like 3 -0.0124578
S100A11 S100 calcium binding protein A11 -0.0123428
IFITM1 interferon induced transmembrane protein 1 -0.0121255
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0120398
SRPK2 SRSF protein kinase 2 -0.0119902
TMEM165 transmembrane protein 165 -0.0119591
CST3 cystatin C -0.011915
COL6A2 collagen, type VI, alpha 2 -0.0119035
COL5A1 collagen, type V, alpha 1 -0.0114973
FTH1 ferritin, heavy polypeptide 1 -0.0114824
CD151 CD151 molecule (Raph blood group) -0.0111959
TTC3 tetratricopeptide repeat domain 3 -0.0111329
RBM25 RNA binding motif protein 25 -0.0109481
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0108975
CYB5R3 cytochrome b5 reductase 3 -0.0104219
IL7R interleukin 7 receptor -0.0103554
CKAP4 cytoskeleton-associated protein 4 -0.0103231
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0102099
MRC2 mannose receptor, C type 2 -0.0102066
SORBS2 sorbin and SH3 domain containing 2 -0.0101437