Alpelisib_CHP-212 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Alpelisib perturbation in CHP-212 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Alpelisib_CHP-212 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TLE4 transducin-like enhancer of split 4 0.121893
VCL vinculin 0.105808
FMN1 formin 1 0.0751017
MEIS2 Meis homeobox 2 0.071954
LSAMP limbic system-associated membrane protein 0.0629331
RNF213 ring finger protein 213 0.0617683
PLPP1 phospholipid phosphatase 1 0.0616102
SYT1 synaptotagmin I 0.0609717
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.0573072
TPST1 tyrosylprotein sulfotransferase 1 0.0510448
PTPRK protein tyrosine phosphatase, receptor type, K 0.0510009
DST dystonin 0.0506629
NCAM2 neural cell adhesion molecule 2 0.0498266
ZSWIM6 zinc finger, SWIM-type containing 6 0.0497079
BPTF bromodomain PHD finger transcription factor 0.0494538
LGR5 leucine-rich repeat containing G protein-coupled receptor 5 0.048543
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0462668
THBS1 thrombospondin 1 0.045122
RIGI RNA sensor RIG-I 0.0449628
SOS1 son of sevenless homolog 1 (Drosophila) 0.0431531
INTS6 integrator complex subunit 6 0.0397023
PRKCA protein kinase C, alpha 0.0392564
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.0391727
SLITRK6 SLIT and NTRK-like family, member 6 0.0383803
LPIN1 lipin 1 0.038026
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0378527
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0374133
AUTS2 autism susceptibility candidate 2 0.0368879
ITGA1 integrin, alpha 1 0.0367148
ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 0.0357041
VMP1 vacuole membrane protein 1 0.0349848
MYO6 myosin VI 0.0342077
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0340058
TMTC2 transmembrane and tetratricopeptide repeat containing 2 0.0336675
SEPTIN9 septin 9 0.0331615
AOPEP aminopeptidase O (putative) 0.0321131
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0316918
TPM1 tropomyosin 1 (alpha) 0.0315227
APLP2 amyloid beta (A4) precursor-like protein 2 0.0309027
MBD5 methyl-CpG binding domain protein 5 0.0299197
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.0297323
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related) 0.0293864
GLCCI1 glucocorticoid induced 1 0.0285832
NPAS2 neuronal PAS domain protein 2 0.0281577
AHNAK AHNAK nucleoprotein 0.0278148
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0277168
AEBP2 AE binding protein 2 0.0276922
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0276533
RALYL RALY RNA binding protein-like 0.0274285
ATXN1 ataxin 1 0.0273926
SYNPO2 synaptopodin 2 0.0273403
FERMT2 fermitin family member 2 0.0271734
ARID4B AT rich interactive domain 4B (RBP1-like) 0.0271561
FAM107B family with sequence similarity 107, member B 0.0267779
MRTFA myocardin related transcription factor A 0.0267482
GLI3 GLI family zinc finger 3 0.0266499
PTPRD protein tyrosine phosphatase, receptor type, D 0.0263689
CDH10 cadherin 10, type 2 (T2-cadherin) 0.0262235
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.0260781
PDE10A phosphodiesterase 10A 0.0257595
HOMER1 homer scaffolding protein 1 0.0255458
EXOC4 exocyst complex component 4 0.0254038
UNC5C unc-5 homolog C (C. elegans) 0.0249119
PDLIM5 PDZ and LIM domain 5 0.0244226
APP amyloid beta (A4) precursor protein 0.0243903
ADGRB3 adhesion G protein-coupled receptor B3 0.0242385
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0238166
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase) 0.0234253
TRIB2 tribbles pseudokinase 2 0.0229075
FOXP1 forkhead box P1 0.0228837
DKK2 dickkopf WNT signaling pathway inhibitor 2 0.0228672
STK38L serine/threonine kinase 38 like 0.0228262
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0227003
NFE2L1 nuclear factor, erythroid 2-like 1 0.0225659
SPAG9 sperm associated antigen 9 0.0221392
PCBP2 poly(rC) binding protein 2 0.0221354
CTNND1 catenin (cadherin-associated protein), delta 1 0.0219132
KDM4C lysine (K)-specific demethylase 4C 0.0218903
SDK1 sidekick cell adhesion molecule 1 0.0216462
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0214463
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0212709
FNDC3A fibronectin type III domain containing 3A 0.0212447
HSPA8 heat shock 70kDa protein 8 0.0210435
PARP14 poly (ADP-ribose) polymerase family, member 14 0.021022
BCAS3 breast carcinoma amplified sequence 3 0.0209642
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0209482
GRK5 G protein-coupled receptor kinase 5 0.0208017
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0205303
MBTD1 mbt domain containing 1 0.0203947
MYO1E myosin IE 0.0203277
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0202619
LPP LIM domain containing preferred translocation partner in lipoma 0.0202421
MBNL1 muscleblind-like splicing regulator 1 0.0200441
IFI16 interferon, gamma-inducible protein 16 0.0199759
ANTXR2 anthrax toxin receptor 2 0.0199428
NRIP1 nuclear receptor interacting protein 1 0.0198075
MYH9 myosin, heavy chain 9, non-muscle 0.0197996
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0197005
HMBOX1 homeobox containing 1 0.0195674
PMP22 peripheral myelin protein 22 0.0195623

decreased expression

Symbol Name Standardized Value
IGF2 insulin-like growth factor 2 -0.46964
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 -0.141892
VIM vimentin -0.0812896
COL1A1 collagen, type I, alpha 1 -0.0720781
PTMA prothymosin, alpha -0.0675154
RPL35A ribosomal protein L35a -0.0611169
TMSB10 thymosin beta 10 -0.0548789
RPL23 ribosomal protein L23 -0.0440991
RPS6 ribosomal protein S6 -0.0429839
ACTG1 actin gamma 1 -0.0423917
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0421149
TPT1 tumor protein, translationally-controlled 1 -0.0417854
RPS19 ribosomal protein S19 -0.0400169
RPS3 ribosomal protein S3 -0.0387365
RPL31 ribosomal protein L31 -0.0343958
FTL ferritin, light polypeptide -0.0335528
IGFBP5 insulin-like growth factor binding protein 5 -0.0314642
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0314095
RPL37A ribosomal protein L37a -0.0307115
RPL34 ribosomal protein L34 -0.0304696
NRG1 neuregulin 1 -0.0298193
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0296697
RPL7A ribosomal protein L7a -0.0292027
HIP1 huntingtin interacting protein 1 -0.0290248
HMGA2 high mobility group AT-hook 2 -0.0287118
RPL32 ribosomal protein L32 -0.028387
IGFBP3 insulin-like growth factor binding protein 3 -0.0276938
IER3 immediate early response 3 -0.0275362
RPS14 ribosomal protein S14 -0.0274448
RPTOR regulatory associated protein of MTOR, complex 1 -0.0274119
RPS24 ribosomal protein S24 -0.0267227
NALF1 NALCN channel auxiliary factor 1 -0.0266511
CBX3 chromobox homolog 3 -0.026436
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 -0.0262481
RPS17 ribosomal protein S17 -0.0261787
RPS23 ribosomal protein S23 -0.0255524
CDH13 cadherin 13 -0.025369
SCG2 secretogranin II -0.0246848
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.024411
RPLP1 ribosomal protein, large, P1 -0.0242707
GPC6 glypican 6 -0.0241677
RPS5 ribosomal protein S5 -0.0241024
S100A6 S100 calcium binding protein A6 -0.0230763
DCAF7 DDB1 and CUL4 associated factor 7 -0.0229955
CEMIP cell migration inducing protein, hyaluronan binding -0.0224571
RPL38 ribosomal protein L38 -0.0219633
NAP1L1 nucleosome assembly protein 1-like 1 -0.0217447
RPS29 ribosomal protein S29 -0.0216279
MAML2 mastermind-like 2 (Drosophila) -0.0215475
NDRG1 N-myc downstream regulated 1 -0.021349
CRH corticotropin releasing hormone -0.0210093
COL18A1 collagen, type XVIII, alpha 1 -0.0203588
DTNA dystrobrevin, alpha -0.0203263
EIF1 eukaryotic translation initiation factor 1 -0.0202136
RPS12 ribosomal protein S12 -0.0201392
POTEF POTE ankyrin domain family, member F -0.0200671
GOLGA4 golgin A4 -0.0197301
RPS27A ribosomal protein S27a -0.0195814
RPLP2 ribosomal protein, large, P2 -0.0190928
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0190506
PFN1 profilin 1 -0.0190399
RPL5 ribosomal protein L5 -0.0188305
MEF2A myocyte enhancer factor 2A -0.0188252
PDE4D phosphodiesterase 4D, cAMP-specific -0.018635
RPS25 ribosomal protein S25 -0.0185982
RHOBTB3 Rho-related BTB domain containing 3 -0.0184408
RPS21 ribosomal protein S21 -0.0181557
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.0179103
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0178332
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0178138
CCND1 cyclin D1 -0.0175803
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0174417
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0174046
PRRC2C proline-rich coiled-coil 2C -0.0171866
PKM pyruvate kinase, muscle -0.0171432
RPS16 ribosomal protein S16 -0.0171174
CA12 carbonic anhydrase XII -0.0169521
DSTN destrin (actin depolymerizing factor) -0.0169473
RPL26 ribosomal protein L26 -0.0169354
ACBD3 acyl-CoA binding domain containing 3 -0.0169045
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0168927
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0167708
RPS15 ribosomal protein S15 -0.0167559
NREP neuronal regeneration related protein -0.0166548
RPL10A ribosomal protein L10a -0.016501
XPR1 xenotropic and polytropic retrovirus receptor 1 -0.016422
ENO2 enolase 2 (gamma, neuronal) -0.0161829
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0160179
RPS10 ribosomal protein S10 -0.0160068
RPL36A ribosomal protein L36a -0.0159462
PDIA6 protein disulfide isomerase family A, member 6 -0.0158321
RAI14 retinoic acid induced 14 -0.0157764
WDR45B WD repeat domain 45B -0.0157082
FNDC3B fibronectin type III domain containing 3B -0.0154386
PDIA3 protein disulfide isomerase family A, member 3 -0.0153753
RPLP0 ribosomal protein, large, P0 -0.0152502
RHOA ras homolog family member A -0.015246
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0152437
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0152043
AKAP12 A kinase (PRKA) anchor protein 12 -0.0151736