Alpelisib_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Alpelisib perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Alpelisib_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LMO7 LIM domain 7 0.237402
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 0.158739
SPTBN1 spectrin, beta, non-erythrocytic 1 0.150399
SMAD3 SMAD family member 3 0.133025
INTS6 integrator complex subunit 6 0.109681
EXT1 exostosin glycosyltransferase 1 0.104779
AKAP13 A kinase (PRKA) anchor protein 13 0.0863916
ERN1 endoplasmic reticulum to nucleus signaling 1 0.0861584
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.0812656
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 0.0793541
RNF213 ring finger protein 213 0.0784452
GCLC glutamate-cysteine ligase, catalytic subunit 0.0762895
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0722521
SIPA1L2 signal-induced proliferation-associated 1 like 2 0.0714312
MYO1E myosin IE 0.0649811
DSCAM Down syndrome cell adhesion molecule 0.0624147
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0604325
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0603913
ANXA2 annexin A2 0.058691
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0577682
EFNB2 ephrin-B2 0.0571683
TJP1 tight junction protein 1 0.0516476
RUNX1 runt-related transcription factor 1 0.0515288
ETV6 ets variant 6 0.0489186
ELOF1 elongation factor 1 homolog (S. cerevisiae) 0.0488329
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0479851
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0478088
ZSWIM6 zinc finger, SWIM-type containing 6 0.0470257
YAP1 Yes-associated protein 1 0.0469719
PLSCR2 phospholipid scramblase 2 0.0456982
FAT1 FAT atypical cadherin 1 0.0443697
LPP LIM domain containing preferred translocation partner in lipoma 0.0440888
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0434362
LCN2 lipocalin 2 0.0422937
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.041628
KYNU kynureninase 0.0411016
MYO5B myosin VB 0.0407507
SNTB1 syntrophin, beta 1 (dystrophin-associated protein A1, 59kDa, basic component 1) 0.0377089
ATXN1 ataxin 1 0.0374519
SEPTIN9 septin 9 0.0372464
MCU mitochondrial calcium uniporter 0.0367825
HKDC1 hexokinase domain containing 1 0.0358595
VCL vinculin 0.0354877
ANKRD10 ankyrin repeat domain 10 0.0352415
CATSPERB catsper channel auxiliary subunit beta 0.0350902
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0346851
SHB Src homology 2 domain containing adaptor protein B 0.0337797
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0336722
ASPH aspartate beta-hydroxylase 0.0335088
DST dystonin 0.033387
LURAP1L leucine rich adaptor protein 1-like 0.0332411
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0327471
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.0324313
DPP4 dipeptidyl-peptidase 4 0.0324307
STK24 serine/threonine kinase 24 0.0323141
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.031816
SIK3 SIK family kinase 3 0.0314587
APLP2 amyloid beta (A4) precursor-like protein 2 0.0305005
VMP1 vacuole membrane protein 1 0.0303656
TRIM2 tripartite motif containing 2 0.0298154
UTRN utrophin 0.0292299
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) 0.0288951
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0286245
MBNL2 muscleblind-like splicing regulator 2 0.0284983
CEMIP cell migration inducing protein, hyaluronan binding 0.0280217
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0277956
APP amyloid beta (A4) precursor protein 0.0277685
TOX3 TOX high mobility group box family member 3 0.0274103
NEBL nebulette 0.0271811
BTBD9 BTB (POZ) domain containing 9 0.0270373
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0269979
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0269175
CTBP2 C-terminal binding protein 2 0.026739
ATP11A ATPase, class VI, type 11A 0.0263493
CANX calnexin 0.0261751
TMEM65 transmembrane protein 65 0.0257209
MACC1 metastasis associated in colon cancer 1 0.0250564
FNDC3B fibronectin type III domain containing 3B 0.0250309
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.0249881
MSI2 musashi RNA-binding protein 2 0.024953
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0247238
AFF1 AF4/FMR2 family, member 1 0.0244952
MAP7 microtubule-associated protein 7 0.0240205
ZHX2 zinc fingers and homeoboxes 2 0.0240117
ZBTB20 zinc finger and BTB domain containing 20 0.0238414
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0237644
TMC5 transmembrane channel-like 5 0.0236557
SOD2 superoxide dismutase 2, mitochondrial 0.0236506
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0236037
NCEH1 neutral cholesterol ester hydrolase 1 0.0235863
PDZD8 PDZ domain containing 8 0.0234826
WWOX WW domain containing oxidoreductase 0.0231639
FNIP2 folliculin interacting protein 2 0.0231125
AFAP1L2 actin filament associated protein 1-like 2 0.0230808
SPAG9 sperm associated antigen 9 0.0228827
SQSTM1 sequestosome 1 0.0224208
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa 0.0222726
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0221174
SERINC5 serine incorporator 5 0.0220429
NABP1 nucleic acid binding protein 1 0.0220278

decreased expression

Symbol Name Standardized Value
ZMYND8 zinc finger, MYND-type containing 8 -0.104284
TPT1 tumor protein, translationally-controlled 1 -0.101917
PTMA prothymosin, alpha -0.0971958
LYZ lysozyme -0.0882834
NDRG1 N-myc downstream regulated 1 -0.0705818
NPSR1 neuropeptide S receptor 1 -0.0696583
B2M beta-2-microglobulin -0.0686828
HLA-B major histocompatibility complex, class I, B -0.0568725
EGR1 early growth response 1 -0.0556176
TXNIP thioredoxin interacting protein -0.0502571
RPL35A ribosomal protein L35a -0.0462273
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0442776
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0437854
TMSB10 thymosin beta 10 -0.0437507
FTL ferritin, light polypeptide -0.040369
IFI27 interferon, alpha-inducible protein 27 -0.0388006
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) -0.0378066
LOC102724023 ES1 protein homolog, mitochondrial -0.0364484
SSH2 slingshot protein phosphatase 2 -0.0347483
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0330954
EPSTI1 epithelial stromal interaction 1 (breast) -0.0314816
S100A6 S100 calcium binding protein A6 -0.0309055
IGFBP3 insulin-like growth factor binding protein 3 -0.0293206
JUN jun proto-oncogene -0.0290106
RPL34 ribosomal protein L34 -0.0279731
VDAC1 voltage-dependent anion channel 1 -0.0269124
ITGA6 integrin, alpha 6 -0.0265114
C6ORF132 chromosome 6 open reading frame 132 -0.0262887
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0262721
ZKSCAN1 zinc finger with KRAB and SCAN domains 1 -0.0256548
MUC20 mucin 20, cell surface associated -0.0255232
RPS6 ribosomal protein S6 -0.0254509
XAF1 XIAP associated factor 1 -0.0252936
NT5C3A 5'-nucleotidase, cytosolic IIIA -0.0250649
IFI6 interferon, alpha-inducible protein 6 -0.0249991
RPL7L1 ribosomal protein L7-like 1 -0.0249444
EIF1 eukaryotic translation initiation factor 1 -0.0246535
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0245905
RHOBTB3 Rho-related BTB domain containing 3 -0.0243467
TAOK3 TAO kinase 3 -0.0240401
PATJ PATJ crumbs cell polarity complex component -0.0236924
CTSD cathepsin D -0.0236315
NPEPPS aminopeptidase puromycin sensitive -0.0234952
RRBP1 ribosome binding protein 1 -0.0234592
CSTB cystatin B (stefin B) -0.0233793
SLC38A1 solute carrier family 38, member 1 -0.0228162
WDR45B WD repeat domain 45B -0.0223578
GNAS GNAS complex locus -0.0222881
RNF149 ring finger protein 149 -0.0221344
MPHOSPH8 M-phase phosphoprotein 8 -0.0215563
RPS19 ribosomal protein S19 -0.0213921
HMGB1 high mobility group box 1 -0.0213309
ATF4 activating transcription factor 4 -0.0208032
GCC2 GRIP and coiled-coil domain containing 2 -0.0206129
DIAPH3 diaphanous-related formin 3 -0.0202978
CST3 cystatin C -0.0199373
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) -0.0198668
PTEN phosphatase and tensin homolog -0.0198584
LOC112694756 uncharaterized LOC112694756 -0.0198109
RPL37A ribosomal protein L37a -0.0196572
KPNB1 karyopherin (importin) beta 1 -0.0196451
RPS24 ribosomal protein S24 -0.0195676
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0193924
APOL1 apolipoprotein L, 1 -0.019358
PTPRF protein tyrosine phosphatase, receptor type, F -0.0191635
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) -0.0190216
OASL 2'-5'-oligoadenylate synthetase-like -0.0189197
HLA-E major histocompatibility complex, class I, E -0.0188671
ANXA4 annexin A4 -0.018857
RBM25 RNA binding motif protein 25 -0.0187402
LIMA1 LIM domain and actin binding 1 -0.0185975
ACTG1 actin gamma 1 -0.0185322
ACBD3 acyl-CoA binding domain containing 3 -0.0184748
ESRP1 epithelial splicing regulatory protein 1 -0.0182953
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.0181649
EPCAM epithelial cell adhesion molecule -0.0181135
MT2A metallothionein 2A -0.0181072
PMP22 peripheral myelin protein 22 -0.0178378
TMPRSS4 transmembrane protease, serine 4 -0.0178321
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0178007
SMC4 structural maintenance of chromosomes 4 -0.0176452
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.0176351
TFRC transferrin receptor -0.0175392
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.017463
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0173769
IFITM3 interferon induced transmembrane protein 3 -0.0171411
CCNL1 cyclin L1 -0.0170259
RAB6A RAB6A, member RAS oncogene family -0.0169547
BRCA2 breast cancer 2, early onset -0.0169326
TFF3 trefoil factor 3 (intestinal) -0.0169288
PRSS3 protease, serine, 3 -0.0169156
PGK1 phosphoglycerate kinase 1 -0.0168443
CSTPP1 centriolar satellite-associated tubulin polyglutamylase complex regulator 1 -0.0167233
ATP10B ATPase, class V, type 10B -0.0167069
PTGR1 prostaglandin reductase 1 -0.0166931
RPL23 ribosomal protein L23 -0.0166443
CDC42SE2 CDC42 small effector 2 -0.0165648
PIAS1 protein inhibitor of activated STAT, 1 -0.0165421
SREBF2 sterol regulatory element binding transcription factor 2 -0.0165205
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0164231