Alpelisib_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Alpelisib perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Alpelisib_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.148553
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.133344
FAT1 FAT atypical cadherin 1 0.100854
EXT1 exostosin glycosyltransferase 1 0.089933
NEBL nebulette 0.070034
MYO1E myosin IE 0.0666394
LMO7 LIM domain 7 0.0662724
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0527824
AFF1 AF4/FMR2 family, member 1 0.0522493
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0498498
HSPA8 heat shock 70kDa protein 8 0.0495051
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0468389
CEMIP cell migration inducing protein, hyaluronan binding 0.0388197
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0371534
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0363708
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0363209
TGFBR3 transforming growth factor, beta receptor III 0.0360037
MARCHF3 membrane associated ring-CH-type finger 3 0.0358799
PDLIM5 PDZ and LIM domain 5 0.0352169
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.034802
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.034438
AKAP13 A kinase (PRKA) anchor protein 13 0.0306806
AREG amphiregulin 0.0304636
MBNL1 muscleblind-like splicing regulator 1 0.0297209
PARD3B par-3 family cell polarity regulator beta 0.0289905
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0288252
UNC13B unc-13 homolog B (C. elegans) 0.0286274
NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1) 0.0284756
PDE4D phosphodiesterase 4D, cAMP-specific 0.0283883
APLP2 amyloid beta (A4) precursor-like protein 2 0.0283392
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) 0.0281128
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0277041
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0271741
EGFR epidermal growth factor receptor 0.0256441
PCBP2 poly(rC) binding protein 2 0.0249073
KRT18 keratin 18, type I 0.023536
JARID2 jumonji, AT rich interactive domain 2 0.0233287
WHRN whirlin 0.0232184
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0231917
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0230306
WWOX WW domain containing oxidoreductase 0.0228747
CEMIP2 cell migration inducing hyaluronidase 2 0.0228307
RPS18 ribosomal protein S18 0.0227478
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0224536
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0218487
SIK3 SIK family kinase 3 0.0217484
PTPRB protein tyrosine phosphatase, receptor type, B 0.0216331
SEPTIN9 septin 9 0.0213853
LGALS3 lectin, galactoside-binding, soluble, 3 0.0212656
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0212184
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 0.0209873
CALR calreticulin 0.0208396
PDE10A phosphodiesterase 10A 0.0205112
KRT19 keratin 19, type I 0.0204116
TRIM2 tripartite motif containing 2 0.0198039
MT2A metallothionein 2A 0.019765
ATXN1 ataxin 1 0.0196962
SMAD2 SMAD family member 2 0.0196065
SGMS2 sphingomyelin synthase 2 0.0194653
CRY1 cryptochrome circadian clock 1 0.0193188
ARHGAP42 Rho GTPase activating protein 42 0.0192477
TJP1 tight junction protein 1 0.018311
INTS6 integrator complex subunit 6 0.0180781
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1 0.018067
NCEH1 neutral cholesterol ester hydrolase 1 0.0177647
SAMD5 sterile alpha motif domain containing 5 0.017534
UBN2 ubinuclein 2 0.0172517
KLF5 Kruppel-like factor 5 (intestinal) 0.0169918
SQSTM1 sequestosome 1 0.0168963
RPLP0 ribosomal protein, large, P0 0.016861
N4BP2L2 NEDD4 binding protein 2-like 2 0.0168165
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.01662
PDZD8 PDZ domain containing 8 0.0164325
ADGRV1 adhesion G protein-coupled receptor V1 0.0163854
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 0.0163325
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.0163003
FAM107B family with sequence similarity 107, member B 0.0162128
RPL21 ribosomal protein L21 0.0160184
OGDH oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) 0.0159521
FHIT fragile histidine triad 0.0159368
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked 0.0158504
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0158306
QSOX1 quiescin Q6 sulfhydryl oxidase 1 0.0156482
CADPS2 Ca++-dependent secretion activator 2 0.0152686
CATSPERB catsper channel auxiliary subunit beta 0.0152226
TUBA1C tubulin, alpha 1c 0.0150794
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0150327
SLC38A2 solute carrier family 38, member 2 0.0150181
CANX calnexin 0.0150004
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0148195
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0147831
HYOU1 hypoxia up-regulated 1 0.0147276
KIZ kizuna centrosomal protein 0.0145313
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0142256
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 0.0140217
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0139397
TUBA1B tubulin, alpha 1b 0.0139209
SAMD4A sterile alpha motif domain containing 4A 0.0138587
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0137306
B2M beta-2-microglobulin 0.0136853

decreased expression

Symbol Name Standardized Value
NPSR1 neuropeptide S receptor 1 -0.217188
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.159993
TMSB10 thymosin beta 10 -0.135283
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.114473
PTMA prothymosin, alpha -0.107799
ALCAM activated leukocyte cell adhesion molecule -0.0916103
GPHN gephyrin -0.0905783
ANXA2 annexin A2 -0.0793828
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0767799
AHNAK AHNAK nucleoprotein -0.0714258
FLNB filamin B, beta -0.0634419
NALF1 NALCN channel auxiliary factor 1 -0.0626855
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.0624441
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.05743
RPS6 ribosomal protein S6 -0.0567254
PRSS3 protease, serine, 3 -0.0566471
EPCAM epithelial cell adhesion molecule -0.056232
NDRG1 N-myc downstream regulated 1 -0.0535736
RNF43 ring finger protein 43 -0.0531363
BCAT1 branched chain amino-acid transaminase 1, cytosolic -0.0511841
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.0509951
ITGA6 integrin, alpha 6 -0.049964
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0483828
GREB1L growth regulation by estrogen in breast cancer-like -0.0476653
EHBP1 EH domain binding protein 1 -0.0469005
PNISR PNN-interacting serine/arginine-rich protein -0.0466633
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.04488
FERMT1 fermitin family member 1 -0.0442939
CALB1 calbindin 1, 28kDa -0.0439178
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12 -0.0434799
KLF3 Kruppel-like factor 3 (basic) -0.043446
FTH1 ferritin, heavy polypeptide 1 -0.0430984
PPARG peroxisome proliferator-activated receptor gamma -0.042952
GCC2 GRIP and coiled-coil domain containing 2 -0.0429034
EIF1 eukaryotic translation initiation factor 1 -0.0427991
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0412625
SOX4 SRY (sex determining region Y)-box 4 -0.0409668
FNBP1L formin binding protein 1-like -0.0406838
EZR ezrin -0.0405643
SERINC5 serine incorporator 5 -0.0392775
ZFAND3 zinc finger, AN1-type domain 3 -0.0388161
GOLGA4 golgin A4 -0.0381558
NCOR1 nuclear receptor corepressor 1 -0.0378237
RPL32 ribosomal protein L32 -0.037338
MED13L mediator complex subunit 13-like -0.0367169
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0361633
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0360209
KRT8 keratin 8, type II -0.0358958
RPLP1 ribosomal protein, large, P1 -0.0355198
PKM pyruvate kinase, muscle -0.0355032
DLG1 discs, large homolog 1 (Drosophila) -0.0353565
LOC112694756 uncharaterized LOC112694756 -0.0347955
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.0342898
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.034154
ANKRD11 ankyrin repeat domain 11 -0.0340487
BAZ2B bromodomain adjacent to zinc finger domain, 2B -0.0339765
CADPS Ca++-dependent secretion activator -0.0336051
RBM39 RNA binding motif protein 39 -0.0334171
LYZ lysozyme -0.0330856
FAM13A family with sequence similarity 13, member A -0.0329
GDF15 growth differentiation factor 15 -0.0327792
H1-0 H1.0 linker histone -0.032763
ITPR2 inositol 1,4,5-trisphosphate receptor, type 2 -0.0325471
RAB3GAP1 RAB3 GTPase activating protein subunit 1 (catalytic) -0.0319931
MSI2 musashi RNA-binding protein 2 -0.0319384
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0319232
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2 -0.0315643
SETD5 SET domain containing 5 -0.0313421
MAP4 microtubule-associated protein 4 -0.0312486
ITGB4 integrin, beta 4 -0.0310512
WDR45B WD repeat domain 45B -0.0308925
STRN3 striatin, calmodulin binding protein 3 -0.0307232
ZNF292 zinc finger protein 292 -0.0307101
MUC5AC mucin 5AC, oligomeric mucus/gel-forming -0.0307094
EEF2 eukaryotic translation elongation factor 2 -0.0305594
ONECUT3 one cut homeobox 3 -0.0305488
USP3 ubiquitin specific peptidase 3 -0.0304623
INSIG1 insulin induced gene 1 -0.0302819
PRRC2C proline-rich coiled-coil 2C -0.0301741
PCDHB16 protocadherin beta 16 -0.0299817
RIN2 Ras and Rab interactor 2 -0.0299597
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0299283
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 -0.029909
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0296604
KMT2E lysine (K)-specific methyltransferase 2E -0.0296219
KDM3A lysine (K)-specific demethylase 3A -0.0294909
RPS19 ribosomal protein S19 -0.0294301
TNS4 tensin 4 -0.0294116
TRIO trio Rho guanine nucleotide exchange factor -0.0293729
GARS1 glycyl-tRNA synthetase 1 -0.0292909
NF1 neurofibromin 1 -0.0292313
RPS29 ribosomal protein S29 -0.0290359
RNF145 ring finger protein 145 -0.0289588
SRRM2 serine/arginine repetitive matrix 2 -0.0287041
EXOC1 exocyst complex component 1 -0.0285124
S100P S100 calcium binding protein P -0.0282165
GLG1 golgi glycoprotein 1 -0.0282164
ZMYM2 zinc finger, MYM-type 2 -0.0279543
ACACA acetyl-CoA carboxylase alpha -0.0269757
RPS3 ribosomal protein S3 -0.0269372