Alpelisib_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Alpelisib perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Alpelisib_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DST dystonin 0.146679
PSD3 pleckstrin and Sec7 domain containing 3 0.141689
TP63 tumor protein p63 0.0936975
RUNX1 runt-related transcription factor 1 0.0645765
WWTR1 WW domain containing transcription regulator 1 0.0537695
MACF1 microtubule-actin crosslinking factor 1 0.0468231
BIRC3 baculoviral IAP repeat containing 3 0.0424985
HDAC9 histone deacetylase 9 0.0406039
WARS1 tryptophanyl-tRNA synthetase 1 0.0405667
CANX calnexin 0.040116
ZBTB38 zinc finger and BTB domain containing 38 0.0397812
CD44 CD44 molecule (Indian blood group) 0.0389961
SOD2 superoxide dismutase 2, mitochondrial 0.0381359
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0376065
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0375625
NPAS2 neuronal PAS domain protein 2 0.0361608
CMIP c-Maf inducing protein 0.0353044
MYOF myoferlin 0.034535
COL5A2 collagen, type V, alpha 2 0.0338195
ZDHHC14 zinc finger, DHHC-type containing 14 0.033613
HOMER1 homer scaffolding protein 1 0.0327054
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0326338
CFLAR CASP8 and FADD-like apoptosis regulator 0.0325992
BCAR3 breast cancer anti-estrogen resistance 3 0.0322087
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0312092
EEF1G eukaryotic translation elongation factor 1 gamma 0.0299718
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0298073
RPS2 ribosomal protein S2 0.0297934
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0297783
TNS3 tensin 3 0.0292371
GOLGB1 golgin B1 0.0292301
RAD51B RAD51 paralog B 0.0289227
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0287317
FTH1 ferritin, heavy polypeptide 1 0.0285856
SFTPA2 surfactant protein A2 0.0284558
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0283812
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0283319
MB21D2 Mab-21 domain containing 2 0.0274762
ZSWIM6 zinc finger, SWIM-type containing 6 0.0268448
TGM2 transglutaminase 2 0.0266456
APLP2 amyloid beta (A4) precursor-like protein 2 0.0266442
HSPA8 heat shock 70kDa protein 8 0.0264713
DNER delta/notch-like EGF repeat containing 0.0263609
PARP14 poly (ADP-ribose) polymerase family, member 14 0.025738
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0252594
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0251234
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0247024
STAT1 signal transducer and activator of transcription 1, 91kDa 0.024127
TTC3 tetratricopeptide repeat domain 3 0.0240495
ANXA2 annexin A2 0.0235475
DPYD dihydropyrimidine dehydrogenase 0.0232607
SQSTM1 sequestosome 1 0.0228552
SPAG9 sperm associated antigen 9 0.0225249
RSAD2 radical S-adenosyl methionine domain containing 2 0.0224838
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0222676
RCOR1 REST corepressor 1 0.0220963
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0220384
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0220271
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa 0.0220176
CAPRIN2 caprin family member 2 0.0219438
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0216615
TM4SF1 transmembrane 4 L six family member 1 0.0212986
RNF213 ring finger protein 213 0.0212844
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0208505
IFIT1 interferon-induced protein with tetratricopeptide repeats 1 0.0207696
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0204511
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0204272
EREG epiregulin 0.0203217
HOOK2 hook microtubule-tethering protein 2 0.0200854
VEGFC vascular endothelial growth factor C 0.0198059
DSCAM Down syndrome cell adhesion molecule 0.0197321
EGFR epidermal growth factor receptor 0.0196893
IQGAP1 IQ motif containing GTPase activating protein 1 0.0195545
RPS18 ribosomal protein S18 0.0195091
LOXL2 lysyl oxidase-like 2 0.0194796
YEATS2 YEATS domain containing 2 0.0191067
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0189974
EPHA4 EPH receptor A4 0.0188786
B2M beta-2-microglobulin 0.0188718
HDLBP high density lipoprotein binding protein 0.0187772
TRIO trio Rho guanine nucleotide exchange factor 0.0186946
IQCJ-SCHIP1 IQCJ-SCHIP1 readthrough 0.0186443
LYST lysosomal trafficking regulator 0.0185005
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0182327
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.018228
MCTP1 multiple C2 domains, transmembrane 1 0.0181138
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.01784
AHNAK AHNAK nucleoprotein 0.0178155
PDE10A phosphodiesterase 10A 0.0178001
DTX3L deltex 3 like, E3 ubiquitin ligase 0.0177193
LDHA lactate dehydrogenase A 0.0173953
SGMS2 sphingomyelin synthase 2 0.017317
RCAN1 regulator of calcineurin 1 0.0172897
NEK10 NIMA-related kinase 10 0.0171728
BRD2 bromodomain containing 2 0.0171482
C6ORF62 chromosome 6 open reading frame 62 0.01708
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 0.0164827
NCEH1 neutral cholesterol ester hydrolase 1 0.0160984
RPL12 ribosomal protein L12 0.0160944
KTN1 kinectin 1 (kinesin receptor) 0.0159379

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.300388
TMSB10 thymosin beta 10 -0.175496
PTMA prothymosin, alpha -0.162923
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.130711
RPL35A ribosomal protein L35a -0.127402
TPT1 tumor protein, translationally-controlled 1 -0.0678153
FTL ferritin, light polypeptide -0.0675068
RPS6 ribosomal protein S6 -0.0670497
DLG1 discs, large homolog 1 (Drosophila) -0.0558877
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0555573
RPS19 ribosomal protein S19 -0.0541732
RPS24 ribosomal protein S24 -0.0541634
ACTG1 actin gamma 1 -0.0520215
CENPF centromere protein F, 350/400kDa -0.0500437
RPL31 ribosomal protein L31 -0.0487858
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0468713
EIF1 eukaryotic translation initiation factor 1 -0.0462123
POTEF POTE ankyrin domain family, member F -0.045974
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0452423
RPL37A ribosomal protein L37a -0.0448236
MT2A metallothionein 2A -0.0438212
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0434556
TMSB4X thymosin beta 4, X-linked -0.0400426
RPS27A ribosomal protein S27a -0.0384433
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0383618
RPL36A ribosomal protein L36a -0.037687
RPS23 ribosomal protein S23 -0.0376326
RPS12 ribosomal protein S12 -0.037458
EIF5B eukaryotic translation initiation factor 5B -0.0351828
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0336617
SLC38A2 solute carrier family 38, member 2 -0.0331356
PRRC2C proline-rich coiled-coil 2C -0.0320117
WSB1 WD repeat and SOCS box containing 1 -0.031458
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0313292
RPS3 ribosomal protein S3 -0.0308665
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0304455
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.0304249
SMC4 structural maintenance of chromosomes 4 -0.0298351
KPNB1 karyopherin (importin) beta 1 -0.0295873
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.0278343
VDAC1 voltage-dependent anion channel 1 -0.0275455
XPO1 exportin 1 -0.0268265
MKI67 marker of proliferation Ki-67 -0.0266596
FBXO11 F-box protein 11 -0.0263603
RPL34 ribosomal protein L34 -0.0261304
RPS14 ribosomal protein S14 -0.0260515
BRWD1 bromodomain and WD repeat domain containing 1 -0.0260455
RPS25 ribosomal protein S25 -0.0259121
KHDRBS1 KH domain containing, RNA binding, signal transduction associated 1 -0.0258103
RPL19 ribosomal protein L19 -0.0255688
ENO2 enolase 2 (gamma, neuronal) -0.0253328
EGR1 early growth response 1 -0.0253191
S100A10 S100 calcium binding protein A10 -0.0252134
TRA2A transformer 2 alpha homolog (Drosophila) -0.0249053
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0245941
MT1X metallothionein 1X -0.0243454
PNISR PNN-interacting serine/arginine-rich protein -0.0241972
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0241657
RPLP2 ribosomal protein, large, P2 -0.0239962
RBM25 RNA binding motif protein 25 -0.023977
RACK1 receptor for activated C kinase 1 -0.0239668
RPL38 ribosomal protein L38 -0.0239315
RTN4 reticulon 4 -0.0233522
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0232559
WDR45B WD repeat domain 45B -0.0226392
RPL11 ribosomal protein L11 -0.0223096
GARS1 glycyl-tRNA synthetase 1 -0.0221761
HMGA1 high mobility group AT-hook 1 -0.0221015
RPL37 ribosomal protein L37 -0.0218566
THOC2 THO complex 2 -0.0217496
RPL28 ribosomal protein L28 -0.0216869
SRGN serglycin -0.0215973
S100A9 S100 calcium binding protein A9 -0.0212961
RPL7A ribosomal protein L7a -0.0209852
RPS29 ribosomal protein S29 -0.0208359
RPL26 ribosomal protein L26 -0.0206156
OGA O-GlcNAcase -0.0204073
KMT2C lysine (K)-specific methyltransferase 2C -0.020265
GNAS GNAS complex locus -0.0201178
RPLP1 ribosomal protein, large, P1 -0.0200851
SNX14 sorting nexin 14 -0.0200555
CAP1 CAP, adenylate cyclase-associated protein 1 (yeast) -0.0200342
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.019912
CBX3 chromobox homolog 3 -0.0198665
ZMYND8 zinc finger, MYND-type containing 8 -0.0196364
MATR3 matrin 3 -0.0192954
RPL5 ribosomal protein L5 -0.0191729
LRCH3 leucine-rich repeats and calponin homology (CH) domain containing 3 -0.0191517
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.019145
ZNF217 zinc finger protein 217 -0.0191399
TNPO1 transportin 1 -0.0190258
RPS20 ribosomal protein S20 -0.0190136
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0189969
TOP1 topoisomerase (DNA) I -0.0189395
TNFRSF10D tumor necrosis factor receptor superfamily, member 10d, decoy with truncated death domain -0.0188748
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0187341
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0186907
SNX3 sorting nexin 3 -0.0184982
SBF2 SET binding factor 2 -0.018436
SEPTIN7 septin 7 -0.0184202