Alpelisib_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Alpelisib perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Alpelisib_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
EGFR epidermal growth factor receptor 0.284555
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.103271
RNF213 ring finger protein 213 0.0776688
PDE4D phosphodiesterase 4D, cAMP-specific 0.0746749
MYOF myoferlin 0.0737356
LMO7 LIM domain 7 0.0693876
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0587492
PM20D1 peptidase M20 domain containing 1 0.0539584
GRAMD1B GRAM domain containing 1B 0.0536421
DSPP dentin sialophosphoprotein 0.0509396
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0507692
INTS6 integrator complex subunit 6 0.0443284
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0409332
GCLC glutamate-cysteine ligase, catalytic subunit 0.0387737
FNDC3B fibronectin type III domain containing 3B 0.0381387
ANXA2 annexin A2 0.0378048
LIMCH1 LIM and calponin homology domains 1 0.0365627
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0362855
CEMIP cell migration inducing protein, hyaluronan binding 0.0356993
HOMER1 homer scaffolding protein 1 0.0351201
RAD51B RAD51 paralog B 0.0339812
EXT1 exostosin glycosyltransferase 1 0.0338078
NTN4 netrin 4 0.0333565
S100P S100 calcium binding protein P 0.0315984
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.030791
HSPA8 heat shock 70kDa protein 8 0.0295726
ZSWIM6 zinc finger, SWIM-type containing 6 0.0294945
PDLIM5 PDZ and LIM domain 5 0.0293614
DOCK5 dedicator of cytokinesis 5 0.029145
CP ceruloplasmin (ferroxidase) 0.02797
AHR aryl hydrocarbon receptor 0.0279017
SIK3 SIK family kinase 3 0.0278417
SVIL supervillin 0.0277068
IRS2 insulin receptor substrate 2 0.0269977
GOLGB1 golgin B1 0.0269807
MYO1E myosin IE 0.02692
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0268901
DSCAM Down syndrome cell adhesion molecule 0.0268187
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0267309
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 0.0265408
RPS2 ribosomal protein S2 0.0265305
UGDH UDP-glucose 6-dehydrogenase 0.0256884
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.025419
MAP7 microtubule-associated protein 7 0.0254155
CTBP2 C-terminal binding protein 2 0.0253656
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0252668
LRP1B low density lipoprotein receptor-related protein 1B 0.0252624
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0250344
WWOX WW domain containing oxidoreductase 0.0247076
CUX1 cut-like homeobox 1 0.0244503
MX1 MX dynamin-like GTPase 1 0.0243238
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0240659
ALCAM activated leukocyte cell adhesion molecule 0.0236718
LPP LIM domain containing preferred translocation partner in lipoma 0.023612
CATSPERB catsper channel auxiliary subunit beta 0.0227998
KYNU kynureninase 0.0227517
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0227234
THSD4 thrombospondin, type I, domain containing 4 0.0226265
APLP2 amyloid beta (A4) precursor-like protein 2 0.0224612
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0224487
CCSER1 coiled-coil serine-rich protein 1 0.0223599
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0221401
B2M beta-2-microglobulin 0.0220239
RIMS2 regulating synaptic membrane exocytosis 2 0.0215902
RPL7 ribosomal protein L7 0.0215045
CPE carboxypeptidase E 0.0214078
ATF6 activating transcription factor 6 0.0213007
FAM107B family with sequence similarity 107, member B 0.0212385
SLK STE20-like kinase 0.0211844
SLTM SAFB-like, transcription modulator 0.0211613
AKAP9 A kinase (PRKA) anchor protein 9 0.0210315
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0210125
LGALS12 lectin, galactoside-binding, soluble, 12 0.0200543
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.01986
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0198574
CANX calnexin 0.0198054
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0197376
DST dystonin 0.0191052
PTPRK protein tyrosine phosphatase, receptor type, K 0.0191043
SMOC1 SPARC related modular calcium binding 1 0.0189943
TMED2 transmembrane emp24 domain trafficking protein 2 0.0187574
IGF1R insulin-like growth factor 1 receptor 0.0187499
FAT1 FAT atypical cadherin 1 0.0185355
PRDX1 peroxiredoxin 1 0.0184289
MBNL2 muscleblind-like splicing regulator 2 0.0183711
SEPTIN9 septin 9 0.0182195
CABLES1 Cdk5 and Abl enzyme substrate 1 0.01795
CAV2 caveolin 2 0.0179105
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 0.0177122
PARP14 poly (ADP-ribose) polymerase family, member 14 0.0173875
SAMD12 sterile alpha motif domain containing 12 0.0170169
AFF1 AF4/FMR2 family, member 1 0.0168696
IFI6 interferon, alpha-inducible protein 6 0.0168322
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 0.0167662
ATOSA atos homolog A 0.0167608
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0166691
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0166061
TRAPPC9 trafficking protein particle complex 9 0.0165696
CES1 carboxylesterase 1 0.016229
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0161746

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.202464
UBC ubiquitin C -0.126644
LAMC2 laminin, gamma 2 -0.116818
NDRG1 N-myc downstream regulated 1 -0.112698
MT2A metallothionein 2A -0.0923914
NAMPT nicotinamide phosphoribosyltransferase -0.0802561
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0773342
SEC61G Sec61 gamma subunit -0.0696911
PRRC2C proline-rich coiled-coil 2C -0.0692642
FTL ferritin, light polypeptide -0.0624528
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0624289
PKM pyruvate kinase, muscle -0.0605519
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0594999
TPT1 tumor protein, translationally-controlled 1 -0.0560693
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0531025
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0520584
EGR1 early growth response 1 -0.0519613
LAMB3 laminin, beta 3 -0.0505755
LAMA4 laminin, alpha 4 -0.049423
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0469627
TXNRD1 thioredoxin reductase 1 -0.0467052
LOC112694756 uncharaterized LOC112694756 -0.046397
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0454543
MCL1 myeloid cell leukemia 1 -0.0440596
GSK3B glycogen synthase kinase 3 beta -0.0439728
RPS27A ribosomal protein S27a -0.0439579
MT1X metallothionein 1X -0.041658
RBPJ recombination signal binding protein for immunoglobulin kappa J region -0.0415574
TMEM165 transmembrane protein 165 -0.0405014
PTMA prothymosin, alpha -0.0404935
ACTG1 actin gamma 1 -0.0401477
S100A10 S100 calcium binding protein A10 -0.0389286
RPL35A ribosomal protein L35a -0.038901
OSMR oncostatin M receptor -0.0385367
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0369322
KDM3A lysine (K)-specific demethylase 3A -0.0365931
RPS24 ribosomal protein S24 -0.0363872
ASPH aspartate beta-hydroxylase -0.0359109
MKI67 marker of proliferation Ki-67 -0.0357969
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0356534
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0345569
WDR45B WD repeat domain 45B -0.0343136
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0339222
BLZF1 basic leucine zipper nuclear factor 1 -0.0336628
H1-0 H1.0 linker histone -0.033474
TOP1 topoisomerase (DNA) I -0.033219
MCTP1 multiple C2 domains, transmembrane 1 -0.0332145
EIF1 eukaryotic translation initiation factor 1 -0.0329055
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17 -0.0328632
RNMT RNA (guanine-7-) methyltransferase -0.0327698
RAB7A RAB7A, member RAS oncogene family -0.0325884
RTN4 reticulon 4 -0.0320114
NGLY1 N-glycanase 1 -0.0313127
ANKRD12 ankyrin repeat domain 12 -0.0308186
C15ORF48 chromosome 15 open reading frame 48 -0.0300468
BRWD3 bromodomain and WD repeat domain containing 3 -0.0297144
ZFC3H1 zinc finger, C3H1-type containing -0.0294969
PPFIA1 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 1 -0.0287495
STC1 stanniocalcin 1 -0.0286871
RBM25 RNA binding motif protein 25 -0.0286531
NPC1 Niemann-Pick disease, type C1 -0.0286274
BRWD1 bromodomain and WD repeat domain containing 1 -0.0283074
TES testin LIM domain protein -0.0277963
ZNF292 zinc finger protein 292 -0.0274733
RAP1B RAP1B, member of RAS oncogene family -0.0273994
CDCP1 CUB domain containing protein 1 -0.0272675
PGK1 phosphoglycerate kinase 1 -0.0272639
ADAM17 ADAM metallopeptidase domain 17 -0.0271196
KMT2E lysine (K)-specific methyltransferase 2E -0.0266521
KANSL1 KAT8 regulatory NSL complex subunit 1 -0.0264785
RASA2 RAS p21 protein activator 2 -0.0263456
OGA O-GlcNAcase -0.0262499
CSNK1A1 casein kinase 1, alpha 1 -0.0261417
SPAG9 sperm associated antigen 9 -0.026025
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0259121
ZMYND8 zinc finger, MYND-type containing 8 -0.0258346
IER3 immediate early response 3 -0.0256684
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0255955
ARL5B ADP-ribosylation factor-like 5B -0.0254035
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.025388
ZC3H11A zinc finger CCCH-type containing 11A -0.0249117
CAMTA1 calmodulin binding transcription activator 1 -0.0247293
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0247251
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0247051
CCNL1 cyclin L1 -0.0246267
BTG1 B-cell translocation gene 1, anti-proliferative -0.0245125
SENP5 SUMO1/sentrin specific peptidase 5 -0.0244135
RUNX1 runt-related transcription factor 1 -0.0243077
RPS3 ribosomal protein S3 -0.0242767
SEPTIN2 septin 2 -0.0242719
ARRDC3 arrestin domain containing 3 -0.024175
CCNI cyclin I -0.0241253
EEF2 eukaryotic translation elongation factor 2 -0.0238032
CST3 cystatin C -0.0236697
LANCL2 LanC lantibiotic synthetase component C-like 2 (bacterial) -0.0235165
MKNK2 MAP kinase interacting serine/threonine kinase 2 -0.0234383
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0233286
SEPTIN10 septin 10 -0.0233121
MATR3 matrin 3 -0.0231991
CSNK1E casein kinase 1, epsilon -0.023111