Alpelisib_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Alpelisib perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Alpelisib_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
TXNRD1 thioredoxin reductase 1 0.260265
KYNU kynureninase 0.243542
AKAP13 A kinase (PRKA) anchor protein 13 0.153379
ASPH aspartate beta-hydroxylase 0.143108
LIMCH1 LIM and calponin homology domains 1 0.135904
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.126637
EGFR epidermal growth factor receptor 0.111319
NAMPT nicotinamide phosphoribosyltransferase 0.110882
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.108422
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.10557
DSCAM Down syndrome cell adhesion molecule 0.104843
AKAP12 A kinase (PRKA) anchor protein 12 0.102308
VIM vimentin 0.097203
FN1 fibronectin 1 0.0855907
BACE2 beta-site APP-cleaving enzyme 2 0.0838097
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0835883
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60 0.0787877
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0728256
EFNA5 ephrin-A5 0.0711383
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 0.0704456
SMAD3 SMAD family member 3 0.0684549
TNPO1 transportin 1 0.0667788
TJP1 tight junction protein 1 0.0661476
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0655089
PRKCA protein kinase C, alpha 0.0638084
TUSC3 tumor suppressor candidate 3 0.0623206
RSPO3 R-spondin 3 0.0599026
MAST4 microtubule associated serine/threonine kinase family member 4 0.0595281
PDE4D phosphodiesterase 4D, cAMP-specific 0.0594909
LMO7 LIM domain 7 0.0587644
ZBTB20 zinc finger and BTB domain containing 20 0.057975
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) 0.0578905
IGF1R insulin-like growth factor 1 receptor 0.0574775
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0574506
RNF213 ring finger protein 213 0.0546712
B2M beta-2-microglobulin 0.0541454
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.0536691
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 0.0509493
NALF1 NALCN channel auxiliary factor 1 0.0497795
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0496702
FAM107B family with sequence similarity 107, member B 0.0489847
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic) 0.0487443
FNDC3B fibronectin type III domain containing 3B 0.0478668
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0477058
EXT1 exostosin glycosyltransferase 1 0.0472759
RICTOR RPTOR independent companion of MTOR, complex 2 0.0451099
ROCK1 Rho-associated, coiled-coil containing protein kinase 1 0.0445474
PTK2 protein tyrosine kinase 2 0.0442104
OASL 2'-5'-oligoadenylate synthetase-like 0.0441269
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0433849
OGA O-GlcNAcase 0.0433642
DOCK4 dedicator of cytokinesis 4 0.0430771
TMSB10 thymosin beta 10 0.0425704
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0424238
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0422598
HDLBP high density lipoprotein binding protein 0.0422339
SLC38A1 solute carrier family 38, member 1 0.0418049
GRAMD1B GRAM domain containing 1B 0.0411886
BRIP1 BRCA1 interacting protein C-terminal helicase 1 0.0401165
AKAP9 A kinase (PRKA) anchor protein 9 0.039202
HLA-B major histocompatibility complex, class I, B 0.0379353
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0373276
MACC1 metastasis associated in colon cancer 1 0.036735
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0363354
SFTPA2 surfactant protein A2 0.0363118
MYOF myoferlin 0.0361517
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0358526
SOD2 superoxide dismutase 2, mitochondrial 0.0354856
RAD51B RAD51 paralog B 0.0349897
APP amyloid beta (A4) precursor protein 0.0347627
GULP1 GULP, engulfment adaptor PTB domain containing 1 0.0342906
ENO1 enolase 1, (alpha) 0.0341704
MTUS1 microtubule associated tumor suppressor 1 0.0331064
USP34 ubiquitin specific peptidase 34 0.032312
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0322405
NCOR2 nuclear receptor corepressor 2 0.0320746
ATXN1 ataxin 1 0.0309417
IGFBP3 insulin-like growth factor binding protein 3 0.0309053
RUNX1 runt-related transcription factor 1 0.0307543
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0300155
PDLIM5 PDZ and LIM domain 5 0.0299183
PARD3 par-3 family cell polarity regulator 0.029803
CALR calreticulin 0.0296392
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0288602
TUFT1 tuftelin 1 0.0285117
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.027817
RPS8 ribosomal protein S8 0.027754
MT2A metallothionein 2A 0.0276413
RPL35A ribosomal protein L35a 0.0275945
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) 0.0275231
TXNIP thioredoxin interacting protein 0.0274014
RGS6 regulator of G-protein signaling 6 0.0273291
NCOR1 nuclear receptor corepressor 1 0.0270687
FUS FUS RNA binding protein 0.0264872
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0264818
LCN2 lipocalin 2 0.0256174
RPL26 ribosomal protein L26 0.0249094
MYO1E myosin IE 0.0249025
EPS8 epidermal growth factor receptor pathway substrate 8 0.0247519
TANK TRAF family member-associated NFKB activator 0.0246033

decreased expression

Symbol Name Standardized Value
GRB10 growth factor receptor-bound protein 10 -0.158777
NDRG1 N-myc downstream regulated 1 -0.116516
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 -0.113798
LAMB3 laminin, beta 3 -0.0932375
CMIP c-Maf inducing protein -0.0929164
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.0877758
PLAUR plasminogen activator, urokinase receptor -0.0852863
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0825929
NAV2 neuron navigator 2 -0.0807563
LAMC2 laminin, gamma 2 -0.0805233
IGF2 insulin-like growth factor 2 -0.0776969
PDE10A phosphodiesterase 10A -0.0734373
WDR26 WD repeat domain 26 -0.0704489
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0702365
KLF5 Kruppel-like factor 5 (intestinal) -0.0698189
CEMIP cell migration inducing protein, hyaluronan binding -0.0694429
SMOC1 SPARC related modular calcium binding 1 -0.0641967
MUC16 mucin 16, cell surface associated -0.0617615
DENND1A DENN/MADD domain containing 1A -0.061183
GOLGA4 golgin A4 -0.060301
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0596923
MARCHF7 membrane associated ring-CH-type finger 7 -0.0582574
FMNL2 formin-like 2 -0.0581134
ZNF292 zinc finger protein 292 -0.0565539
BMAL2 basic helix-loop-helix ARNT like 2 -0.0562931
FNIP1 folliculin interacting protein 1 -0.053321
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0521245
CSNK1A1 casein kinase 1, alpha 1 -0.0520619
VCL vinculin -0.0516204
WSB1 WD repeat and SOCS box containing 1 -0.0513187
RCOR1 REST corepressor 1 -0.0507674
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0500564
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0490763
UBA6 ubiquitin-like modifier activating enzyme 6 -0.0488994
ZNF638 zinc finger protein 638 -0.0484397
TSC22D2 TSC22 domain family, member 2 -0.0484271
LCORL ligand dependent nuclear receptor corepressor-like -0.0480692
SVIL supervillin -0.0479108
CAMTA1 calmodulin binding transcription activator 1 -0.0475364
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase -0.047323
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0467114
MCL1 myeloid cell leukemia 1 -0.0459201
MEF2A myocyte enhancer factor 2A -0.0458436
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0457803
CDC73 cell division cycle 73 -0.0457789
MINDY2 MINDY lysine 48 deubiquitinase 2 -0.0440334
XPO1 exportin 1 -0.0434161
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0431842
NUMB numb homolog (Drosophila) -0.0431543
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0426917
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0425921
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase -0.041598
GFPT1 glutamine--fructose-6-phosphate transaminase 1 -0.0413862
ATOSA atos homolog A -0.0412871
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0411899
FTH1 ferritin, heavy polypeptide 1 -0.0410846
CSDE1 cold shock domain containing E1, RNA-binding -0.0409103
BTG1 B-cell translocation gene 1, anti-proliferative -0.0407423
ANKRD10 ankyrin repeat domain 10 -0.0401687
FOXO1 forkhead box O1 -0.0391177
MAP3K2 mitogen-activated protein kinase kinase kinase 2 -0.039033
SETD2 SET domain containing 2 -0.038409
PATJ PATJ crumbs cell polarity complex component -0.0383465
LOC112694756 uncharaterized LOC112694756 -0.0381133
FXR1 fragile X mental retardation, autosomal homolog 1 -0.037528
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0370044
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0369632
TRA2A transformer 2 alpha homolog (Drosophila) -0.0369286
TMEM41B transmembrane protein 41B -0.0366261
RBM47 RNA binding motif protein 47 -0.0362487
PRELID2 PRELI domain containing 2 -0.0354265
ZFAND3 zinc finger, AN1-type domain 3 -0.0348129
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0344074
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.0339675
LMAN1 lectin, mannose-binding, 1 -0.0339593
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 -0.0338349
FTL ferritin, light polypeptide -0.0333306
SAMD4A sterile alpha motif domain containing 4A -0.032816
ANXA2 annexin A2 -0.0324498
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 -0.0324104
NBEA neurobeachin -0.0321628
RPS6 ribosomal protein S6 -0.032104
ANKRD11 ankyrin repeat domain 11 -0.031957
SERPINA1 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 1 -0.0314749
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0313737
MAML2 mastermind-like 2 (Drosophila) -0.0311678
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0310094
AFDN afadin, adherens junction formation factor -0.0309023
ABHD17C abhydrolase domain containing 17C -0.0306016
GPC6 glypican 6 -0.0305876
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0302309
KIAA1217 KIAA1217 -0.0299732
LNPEP leucyl/cystinyl aminopeptidase -0.0292806
KIAA1671 KIAA1671 -0.0291058
OXR1 oxidation resistance 1 -0.0290219
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0289925
BAIAP2L1 BAI1-associated protein 2-like 1 -0.0289257
JMJD1C jumonji domain containing 1C -0.0285443
KRT17 keratin 17, type I -0.0283213
NEBL nebulette -0.0282345