Alpelisib_NCI-H2347 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Alpelisib perturbation in NCI-H2347 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Alpelisib_NCI-H2347 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.28124
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.174896
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.161704
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.152466
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.139477
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.123121
PABPC1 poly(A) binding protein, cytoplasmic 1 0.116317
SAMD4A sterile alpha motif domain containing 4A 0.102772
ASPH aspartate beta-hydroxylase 0.096607
APLP2 amyloid beta (A4) precursor-like protein 2 0.0918048
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0816748
ANXA2 annexin A2 0.0806402
TRIO trio Rho guanine nucleotide exchange factor 0.0792714
CANX calnexin 0.0773397
FNDC3B fibronectin type III domain containing 3B 0.0749123
PTK2 protein tyrosine kinase 2 0.0729778
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0714734
ZSWIM6 zinc finger, SWIM-type containing 6 0.0679293
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0675181
ELL2 elongation factor, RNA polymerase II, 2 0.066684
ALCAM activated leukocyte cell adhesion molecule 0.0640138
LMO7 LIM domain 7 0.0635377
GRB10 growth factor receptor-bound protein 10 0.0609651
AKAP13 A kinase (PRKA) anchor protein 13 0.0601398
DSPP dentin sialophosphoprotein 0.0594096
FN1 fibronectin 1 0.0589892
PLEC plectin 0.0580691
SMAD3 SMAD family member 3 0.0570709
MYH9 myosin, heavy chain 9, non-muscle 0.0550693
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0549366
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0548601
SGMS2 sphingomyelin synthase 2 0.0544624
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0544152
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0541788
P4HB prolyl 4-hydroxylase, beta polypeptide 0.053659
SQSTM1 sequestosome 1 0.0528399
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.052074
MACF1 microtubule-actin crosslinking factor 1 0.0519662
ARRDC3 arrestin domain containing 3 0.0518091
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.051025
MYO5B myosin VB 0.0506273
LDHA lactate dehydrogenase A 0.0503602
HSPA8 heat shock 70kDa protein 8 0.0498462
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0494331
NAV2 neuron navigator 2 0.049347
G0S2 G0/G1 switch 2 0.0493244
ERBIN erbb2 interacting protein 0.0489879
LAMC2 laminin, gamma 2 0.047172
HDAC9 histone deacetylase 9 0.0470981
PPARD peroxisome proliferator-activated receptor delta 0.0455279
DTNA dystrobrevin, alpha 0.0452977
TJP1 tight junction protein 1 0.0448345
EFNA5 ephrin-A5 0.0440426
NR3C1 nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) 0.0439349
SH3KBP1 SH3-domain kinase binding protein 1 0.0438698
VGLL3 vestigial-like family member 3 0.0435629
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2 0.0435121
IQGAP1 IQ motif containing GTPase activating protein 1 0.0432321
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0428327
POTEF POTE ankyrin domain family, member F 0.0427704
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0419565
KIAA1217 KIAA1217 0.0418098
DIAPH1 diaphanous-related formin 1 0.0410137
RICTOR RPTOR independent companion of MTOR, complex 2 0.0407547
ADAM9 ADAM metallopeptidase domain 9 0.0405799
EGFR epidermal growth factor receptor 0.0403362
MYO10 myosin X 0.0401998
NR3C2 nuclear receptor subfamily 3, group C, member 2 0.0399447
CALR calreticulin 0.0399216
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0397889
MCL1 myeloid cell leukemia 1 0.038514
TOP1 topoisomerase (DNA) I 0.0384197
RAB11FIP1 RAB11 family interacting protein 1 (class I) 0.0381334
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0380954
ANO6 anoctamin 6 0.0375933
PCBP2 poly(rC) binding protein 2 0.0375284
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0371892
EZR ezrin 0.0371153
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0365862
EGR1 early growth response 1 0.0363842
BRD2 bromodomain containing 2 0.0362348
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0357432
MX1 MX dynamin-like GTPase 1 0.0356714
HMGA1 high mobility group AT-hook 1 0.0351248
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0351137
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0348063
MSN moesin 0.034737
UBC ubiquitin C 0.0346778
TPM3 tropomyosin 3 0.0345365
NAMPT nicotinamide phosphoribosyltransferase 0.0344755
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0339092
KRT19 keratin 19, type I 0.0337669
MACC1 metastasis associated in colon cancer 1 0.0336714
KRT7 keratin 7, type II 0.0332912
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.0331198
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0326219
CD44 CD44 molecule (Indian blood group) 0.0325795
MAP1B microtubule-associated protein 1B 0.0324938
ZFAND3 zinc finger, AN1-type domain 3 0.0322683
DST dystonin 0.0320084

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.0803838
FTL ferritin, light polypeptide -0.0803186
PTMA prothymosin, alpha -0.0790221
TPT1 tumor protein, translationally-controlled 1 -0.0741176
SOX4 SRY (sex determining region Y)-box 4 -0.0681449
RPL35A ribosomal protein L35a -0.0675513
RPS29 ribosomal protein S29 -0.062614
WSB1 WD repeat and SOCS box containing 1 -0.0587731
LPP LIM domain containing preferred translocation partner in lipoma -0.0500837
EIF1 eukaryotic translation initiation factor 1 -0.049382
RPS23 ribosomal protein S23 -0.0493361
LIMCH1 LIM and calponin homology domains 1 -0.0486632
IFITM1 interferon induced transmembrane protein 1 -0.0455954
RPL37A ribosomal protein L37a -0.045448
RPL9 ribosomal protein L9 -0.0446801
HLA-B major histocompatibility complex, class I, B -0.0445363
RPS27A ribosomal protein S27a -0.0424728
IFI6 interferon, alpha-inducible protein 6 -0.041187
GNAS GNAS complex locus -0.0396181
RPS3 ribosomal protein S3 -0.039548
ISG15 ISG15 ubiquitin-like modifier -0.0384913
RPLP2 ribosomal protein, large, P2 -0.0377682
RPS13 ribosomal protein S13 -0.0360629
RPS8 ribosomal protein S8 -0.0329779
RPL31 ribosomal protein L31 -0.0302233
RPL11 ribosomal protein L11 -0.0293938
MDK midkine (neurite growth-promoting factor 2) -0.0293337
RPL37 ribosomal protein L37 -0.0291639
IFITM3 interferon induced transmembrane protein 3 -0.0291495
RPL34 ribosomal protein L34 -0.0289384
S100A10 S100 calcium binding protein A10 -0.0285746
HSPB1 heat shock 27kDa protein 1 -0.0283405
RPL36 ribosomal protein L36 -0.0273074
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.027299
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0268066
CSTB cystatin B (stefin B) -0.0256201
RPLP1 ribosomal protein, large, P1 -0.0250822
RPS6 ribosomal protein S6 -0.0250552
RPS10 ribosomal protein S10 -0.0249769
RPS27 ribosomal protein S27 -0.0248819
RPL15 ribosomal protein L15 -0.0246815
RPL38 ribosomal protein L38 -0.0245214
HLA-E major histocompatibility complex, class I, E -0.0244381
VCL vinculin -0.0236975
ACTG1 actin gamma 1 -0.0235591
RPS12 ribosomal protein S12 -0.0234112
C15ORF48 chromosome 15 open reading frame 48 -0.0232901
CTSD cathepsin D -0.0227034
EPCAM epithelial cell adhesion molecule -0.0225639
HLA-A major histocompatibility complex, class I, A -0.0225439
H3-3B H3.3 histone B -0.0224822
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0219644
FBXO34 F-box protein 34 -0.021597
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0214603
RPL28 ribosomal protein L28 -0.0213035
RPS21 ribosomal protein S21 -0.0212697
NPEPPS aminopeptidase puromycin sensitive -0.0211141
COX7C cytochrome c oxidase subunit VIIc -0.0207616
PSME1 proteasome (prosome, macropain) activator subunit 1 (PA28 alpha) -0.0206268
FBXO32 F-box protein 32 -0.0204462
FAM162A family with sequence similarity 162, member A -0.0199323
IFI27 interferon, alpha-inducible protein 27 -0.0194096
WFDC2 WAP four-disulfide core domain 2 -0.0193102
CAVIN1 caveolae associated protein 1 -0.0191855
KDM5B lysine (K)-specific demethylase 5B -0.0190944
FUT8 fucosyltransferase 8 (alpha (1,6) fucosyltransferase) -0.0184185
S100A9 S100 calcium binding protein A9 -0.0180144
B2M beta-2-microglobulin -0.0179067
MAP3K13 mitogen-activated protein kinase kinase kinase 13 -0.0178794
RPS25 ribosomal protein S25 -0.0176106
RPS16 ribosomal protein S16 -0.0167229
YY1 YY1 transcription factor -0.0165003
TMSB4X thymosin beta 4, X-linked -0.0164938
MUC20 mucin 20, cell surface associated -0.0163874
ENO2 enolase 2 (gamma, neuronal) -0.0159236
COX6C cytochrome c oxidase subunit VIc -0.0154473
RPS15 ribosomal protein S15 -0.0153092
RPL27 ribosomal protein L27 -0.0150582
AOPEP aminopeptidase O (putative) -0.0148556
MBNL2 muscleblind-like splicing regulator 2 -0.0148274
KMT2C lysine (K)-specific methyltransferase 2C -0.0146979
RPL26 ribosomal protein L26 -0.0146309
MUC1 mucin 1, cell surface associated -0.014537
TMEM263 transmembrane protein 263 -0.014434
PDXK pyridoxal (pyridoxine, vitamin B6) kinase -0.0144241
ASAH1 N-acylsphingosine amidohydrolase (acid ceramidase) 1 -0.0144181
TTC3 tetratricopeptide repeat domain 3 -0.0143947
NPC2 Niemann-Pick disease, type C2 -0.0141996
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0140898
RPS11 ribosomal protein S11 -0.0140401
TMEM165 transmembrane protein 165 -0.0140333
RPL36A ribosomal protein L36a -0.0139139
RPS20 ribosomal protein S20 -0.0139134
ARF1 ADP-ribosylation factor 1 -0.0138993
F3 coagulation factor III (thromboplastin, tissue factor) -0.0138616
NEBL nebulette -0.0138309
RRBP1 ribosome binding protein 1 -0.0136682
IFITM2 interferon induced transmembrane protein 2 -0.0134963
MRPS6 mitochondrial ribosomal protein S6 -0.0132283
RPS24 ribosomal protein S24 -0.0131995