Alpelisib_NCI-H460 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Alpelisib perturbation in NCI-H460 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Alpelisib_NCI-H460 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.299046
FN1 fibronectin 1 0.199166
PDE4D phosphodiesterase 4D, cAMP-specific 0.187893
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.177911
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.15714
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.134796
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.131137
PSD3 pleckstrin and Sec7 domain containing 3 0.115029
PDE10A phosphodiesterase 10A 0.111275
MCL1 myeloid cell leukemia 1 0.102243
PM20D1 peptidase M20 domain containing 1 0.0985852
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0944607
BASP1 brain abundant, membrane attached signal protein 1 0.0872064
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0826163
SH3KBP1 SH3-domain kinase binding protein 1 0.0749257
CDH13 cadherin 13 0.0740412
PRKN parkin RBR E3 ubiquitin protein ligase 0.0721069
VIM vimentin 0.0719742
PDLIM5 PDZ and LIM domain 5 0.071098
KYNU kynureninase 0.0710469
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0703712
LDHA lactate dehydrogenase A 0.0703703
CANX calnexin 0.0700131
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0696952
SMOC1 SPARC related modular calcium binding 1 0.0694435
P3H2 prolyl 3-hydroxylase 2 0.0689095
MAML3 mastermind-like 3 (Drosophila) 0.0663219
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.06419
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0631985
SMAD2 SMAD family member 2 0.0611799
FNDC3A fibronectin type III domain containing 3A 0.061125
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0610369
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0609309
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0607691
STC1 stanniocalcin 1 0.0598125
SPTBN1 spectrin, beta, non-erythrocytic 1 0.059411
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.0590883
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.0590007
EEF2 eukaryotic translation elongation factor 2 0.0584872
PTPRM protein tyrosine phosphatase, receptor type, M 0.0564709
GRAMD1B GRAM domain containing 1B 0.055987
IGFBP3 insulin-like growth factor binding protein 3 0.0555469
SQSTM1 sequestosome 1 0.0551867
PKM pyruvate kinase, muscle 0.0546268
ENO1 enolase 1, (alpha) 0.0542184
CTSL cathepsin L 0.0540761
DOCK5 dedicator of cytokinesis 5 0.0524039
PCBP2 poly(rC) binding protein 2 0.0508104
B2M beta-2-microglobulin 0.0507214
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13 0.0503099
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0502728
RAB3B RAB3B, member RAS oncogene family 0.0494935
PTMA prothymosin, alpha 0.0493698
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0492042
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 0.0488409
IFIT3 interferon-induced protein with tetratricopeptide repeats 3 0.0483232
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0478921
ANXA2 annexin A2 0.0478649
MYOF myoferlin 0.0476549
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0475926
AKAP13 A kinase (PRKA) anchor protein 13 0.0463458
SFTPA2 surfactant protein A2 0.0463305
INHBA inhibin, beta A 0.0435831
BZW1 basic leucine zipper and W2 domains 1 0.0426493
HLA-A major histocompatibility complex, class I, A 0.0426408
PYGL phosphorylase, glycogen, liver 0.0421892
ESYT2 extended synaptotagmin-like protein 2 0.0420806
PDE3A phosphodiesterase 3A, cGMP-inhibited 0.0420196
APLP2 amyloid beta (A4) precursor-like protein 2 0.0419629
AUTS2 autism susceptibility candidate 2 0.0419606
FTH1 ferritin, heavy polypeptide 1 0.0411215
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0410923
OASL 2'-5'-oligoadenylate synthetase-like 0.0405584
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.039743
MAP7 microtubule-associated protein 7 0.0394254
RPS6 ribosomal protein S6 0.0392133
RPS8 ribosomal protein S8 0.0380056
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0378882
FAM107B family with sequence similarity 107, member B 0.0374175
KRT19 keratin 19, type I 0.0373332
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide 0.0364825
RAD51B RAD51 paralog B 0.0361925
HSPA8 heat shock 70kDa protein 8 0.0361497
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0361313
CTBP2 C-terminal binding protein 2 0.0360209
ANTXR1 anthrax toxin receptor 1 0.0351814
KTN1 kinectin 1 (kinesin receptor) 0.0351789
WARS1 tryptophanyl-tRNA synthetase 1 0.0350173
CTIF CBP80/20-dependent translation initiation factor 0.0349438
DPP10 dipeptidyl-peptidase 10 (non-functional) 0.0348981
IQGAP1 IQ motif containing GTPase activating protein 1 0.0347968
TPM3 tropomyosin 3 0.0346619
SLC44A1 solute carrier family 44 (choline transporter), member 1 0.0341241
NR4A2 nuclear receptor subfamily 4, group A, member 2 0.0339362
NPAS2 neuronal PAS domain protein 2 0.0338436
SET SET nuclear proto-oncogene 0.0333341
DOCK4 dedicator of cytokinesis 4 0.0331855
PGK1 phosphoglycerate kinase 1 0.0331113
MT2A metallothionein 2A 0.0328672
PRKAA2 protein kinase, AMP-activated, alpha 2 catalytic subunit 0.0324939

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0777174
TXNRD1 thioredoxin reductase 1 -0.0727914
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0638921
NEK7 NIMA-related kinase 7 -0.0634988
RTN4 reticulon 4 -0.0383733
LGALS3 lectin, galactoside-binding, soluble, 3 -0.0332793
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0307971
TNPO1 transportin 1 -0.0273226
TPT1 tumor protein, translationally-controlled 1 -0.0270426
AKR1C1 aldo-keto reductase family 1, member C1 -0.0267684
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.026566
RPS24 ribosomal protein S24 -0.0264192
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0261617
NAMPT nicotinamide phosphoribosyltransferase -0.0250761
OGA O-GlcNAcase -0.0245892
RBM39 RNA binding motif protein 39 -0.024475
TM4SF1 transmembrane 4 L six family member 1 -0.0241159
ENAH enabled homolog (Drosophila) -0.0225069
ABCC2 ATP-binding cassette, sub-family C (CFTR/MRP), member 2 -0.0212047
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.020384
AKT3 v-akt murine thymoma viral oncogene homolog 3 -0.020295
USP3 ubiquitin specific peptidase 3 -0.0200138
AGFG1 ArfGAP with FG repeats 1 -0.0199004
EIF1 eukaryotic translation initiation factor 1 -0.019514
NTN4 netrin 4 -0.0192721
RPS27A ribosomal protein S27a -0.0191651
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0191512
CTSC cathepsin C -0.0191173
RPL9 ribosomal protein L9 -0.0185146
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0185014
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0177518
BRWD3 bromodomain and WD repeat domain containing 3 -0.0175967
RPL35A ribosomal protein L35a -0.0175104
TMSB10 thymosin beta 10 -0.0170951
ARHGAP29 Rho GTPase activating protein 29 -0.016477
AKR1C2 aldo-keto reductase family 1, member C2 -0.0158952
ADGRB3 adhesion G protein-coupled receptor B3 -0.0150633
GDA guanine deaminase -0.0147011
PNISR PNN-interacting serine/arginine-rich protein -0.0146225
KDM3A lysine (K)-specific demethylase 3A -0.0145457
TM9SF3 transmembrane 9 superfamily member 3 -0.0142892
GPRIN3 GPRIN family member 3 -0.0142206
DPYD dihydropyrimidine dehydrogenase -0.0141223
HYCC2 hyccin PI4KA lipid kinase complex subunit 2 -0.0139325
ZMYM2 zinc finger, MYM-type 2 -0.0138374
HIBADH 3-hydroxyisobutyrate dehydrogenase -0.0137118
SERPINB2 serpin peptidase inhibitor, clade B (ovalbumin), member 2 -0.0135406
MFF mitochondrial fission factor -0.0134899
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.0134723
LUC7L2 LUC7-like 2 (S. cerevisiae) -0.0133709
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 -0.0131372
ACSL4 acyl-CoA synthetase long-chain family member 4 -0.0131167
SAR1A secretion associated, Ras related GTPase 1A -0.0130733
POU2F1 POU class 2 homeobox 1 -0.0130016
CEP95 centrosomal protein 95kDa -0.012928
ZNF292 zinc finger protein 292 -0.012848
USP15 ubiquitin specific peptidase 15 -0.0128347
ANK3 ankyrin 3, node of Ranvier (ankyrin G) -0.0128249
WDR43 WD repeat domain 43 -0.0127587
CDK17 cyclin-dependent kinase 17 -0.0127572
TRA2A transformer 2 alpha homolog (Drosophila) -0.012615
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 -0.0126107
PBX1 pre-B-cell leukemia homeobox 1 -0.0124174
ATP13A3 ATPase type 13A3 -0.0123632
PALLD palladin, cytoskeletal associated protein -0.0121409
PUM2 pumilio RNA-binding family member 2 -0.0120296
PHIP pleckstrin homology domain interacting protein -0.0119863
CRYAB crystallin, alpha B -0.0119859
RFX7 regulatory factor X, 7 -0.0116948
MFSD12 major facilitator superfamily domain containing 12 -0.0115863
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.011528
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 -0.0115147
ANKRD28 ankyrin repeat domain 28 -0.0115083
MYPN myopalladin -0.0114401
HSPB1 heat shock 27kDa protein 1 -0.0114054
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0113404
ADGRA3 adhesion G protein-coupled receptor A3 -0.0113381
TGFBI transforming growth factor, beta-induced, 68kDa -0.0112447
SBF2 SET binding factor 2 -0.0112011
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase -0.011157
LYPLAL1 lysophospholipase-like 1 -0.0111141
PID1 phosphotyrosine interaction domain containing 1 -0.0108147
SPRED2 sprouty-related, EVH1 domain containing 2 -0.0107531
AOPEP aminopeptidase O (putative) -0.0107354
SCCPDH saccharopine dehydrogenase (putative) -0.0106916
DLGAP1 discs, large (Drosophila) homolog-associated protein 1 -0.0106862
FOXJ3 forkhead box J3 -0.0106756
ITGAV integrin, alpha V -0.0106408
NPEPPS aminopeptidase puromycin sensitive -0.0105746
PTBP2 polypyrimidine tract binding protein 2 -0.0105724
ANKRD10 ankyrin repeat domain 10 -0.0105713
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0104537
UCK2 uridine-cytidine kinase 2 -0.0103945
RPL13A ribosomal protein L13a -0.0103866
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae) -0.0103279
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0103072
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.0102854
PHF21A PHD finger protein 21A -0.010278
CHML choroideremia-like (Rab escort protein 2) -0.0102529
UQCRB ubiquinol-cytochrome c reductase binding protein -0.0102448