Alpelisib_SNU-1 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Alpelisib perturbation in SNU-1 cell line (Tahoe Therapeutics)
Similar Terms
Downloads & Tools

Genes

200 genes differentially expressed following the Alpelisib_SNU-1 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.189823
FOXP1 forkhead box P1 0.181896
PKM pyruvate kinase, muscle 0.125624
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.124325
ADAM10 ADAM metallopeptidase domain 10 0.123617
VCL vinculin 0.118923
GLI3 GLI family zinc finger 3 0.112724
HDAC9 histone deacetylase 9 0.111443
TJP1 tight junction protein 1 0.111433
PDE4B phosphodiesterase 4B, cAMP-specific 0.108837
EGFR epidermal growth factor receptor 0.0973952
EML4 echinoderm microtubule associated protein like 4 0.0948978
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0889726
ZEB1 zinc finger E-box binding homeobox 1 0.0708464
ZNF608 zinc finger protein 608 0.0703012
MYO5C myosin VC 0.065512
PTMA prothymosin, alpha 0.0647847
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0645722
TRERF1 transcriptional regulating factor 1 0.0629624
GLI2 GLI family zinc finger 2 0.0618265
GSE1 Gse1 coiled-coil protein 0.0605434
SOX6 SRY (sex determining region Y)-box 6 0.056965
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0563989
PTPRG protein tyrosine phosphatase, receptor type, G 0.0561519
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 0.0540061
PDGFC platelet derived growth factor C 0.0537949
EFNA5 ephrin-A5 0.0508927
ZMYND8 zinc finger, MYND-type containing 8 0.0507834
EZR ezrin 0.0502745
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.049232
APLP2 amyloid beta (A4) precursor-like protein 2 0.0485838
SPATS2L spermatogenesis associated, serine-rich 2-like 0.0474426
SEPTIN9 septin 9 0.0471328
TACC2 transforming, acidic coiled-coil containing protein 2 0.04696
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0468685
MACROD2 MACRO domain containing 2 0.0464513
NBEA neurobeachin 0.0456999
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0434513
FER1L6 fer-1-like family member 6 0.0434245
WAC WW domain containing adaptor with coiled-coil 0.0432915
MBNL1 muscleblind-like splicing regulator 1 0.0426772
DSCAM Down syndrome cell adhesion molecule 0.0421901
JMJD1C jumonji domain containing 1C 0.0419915
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0405106
TSC22D1 TSC22 domain family, member 1 0.0404328
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0402965
TM4SF1 transmembrane 4 L six family member 1 0.039111
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.038976
MICAL2 microtubule associated monooxygenase, calponin and LIM domain containing 2 0.0389613
ANXA1 annexin A1 0.0389548
AHNAK AHNAK nucleoprotein 0.0388135
NPAS2 neuronal PAS domain protein 2 0.038772
CYB5B cytochrome b5 type B (outer mitochondrial membrane) 0.0371162
MED13L mediator complex subunit 13-like 0.0351386
USP34 ubiquitin specific peptidase 34 0.0347949
CENPF centromere protein F, 350/400kDa 0.0346509
BPTF bromodomain PHD finger transcription factor 0.0345924
PYGB phosphorylase, glycogen; brain 0.034488
RRM2 ribonucleotide reductase M2 0.0341189
SGMS2 sphingomyelin synthase 2 0.0338234
BMP10 bone morphogenetic protein 10 0.0331606
DUSP4 dual specificity phosphatase 4 0.0329894
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 0.0328486
PCBP2 poly(rC) binding protein 2 0.032716
POTEF POTE ankyrin domain family, member F 0.0318253
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.0316483
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0315136
MED13 mediator complex subunit 13 0.0312358
TTC28 tetratricopeptide repeat domain 28 0.0311104
RBM6 RNA binding motif protein 6 0.0308342
EXT1 exostosin glycosyltransferase 1 0.030826
HSPA8 heat shock 70kDa protein 8 0.0304862
IQGAP1 IQ motif containing GTPase activating protein 1 0.0303011
PDIA3 protein disulfide isomerase family A, member 3 0.0302901
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0302405
SFPQ splicing factor proline/glutamine-rich 0.0299115
ATP2A2 ATPase, Ca++ transporting, cardiac muscle, slow twitch 2 0.0299067
ENO1 enolase 1, (alpha) 0.0298676
PTK2 protein tyrosine kinase 2 0.0297672
FAM91A1 family with sequence similarity 91, member A1 0.0295386
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0295335
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0293224
CREBBP CREB binding protein 0.0291938
SSBP2 single-stranded DNA binding protein 2 0.029132
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0287732
KANK1 KN motif and ankyrin repeat domains 1 0.0285746
SMYD3 SET and MYND domain containing 3 0.0283783
FUBP1 far upstream element (FUSE) binding protein 1 0.0283557
GCNT1 glucosaminyl (N-acetyl) transferase 1, core 2 0.0282891
TNRC6B trinucleotide repeat containing 6B 0.0280387
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0279894
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 0.0278851
NFIA nuclear factor I/A 0.0278324
YBX1 Y box binding protein 1 0.0276324
CREB5 cAMP responsive element binding protein 5 0.0276122
USP8 ubiquitin specific peptidase 8 0.0273658
AHCYL2 adenosylhomocysteinase-like 2 0.0273637
APP amyloid beta (A4) precursor protein 0.0272585
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0272345
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0268521

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.102079
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0565896
TPT1 tumor protein, translationally-controlled 1 -0.0547233
S100A6 S100 calcium binding protein A6 -0.0518008
RPL12 ribosomal protein L12 -0.0517231
ACTG1 actin gamma 1 -0.0496931
B2M beta-2-microglobulin -0.0467223
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0455791
EIF1 eukaryotic translation initiation factor 1 -0.0416965
RPL35A ribosomal protein L35a -0.0413572
PNISR PNN-interacting serine/arginine-rich protein -0.0404544
GARS1 glycyl-tRNA synthetase 1 -0.0404156
WSB1 WD repeat and SOCS box containing 1 -0.0399447
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0393227
RPL13A ribosomal protein L13a -0.0377564
RPL36 ribosomal protein L36 -0.0377231
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0375273
RPL19 ribosomal protein L19 -0.0340677
NEBL nebulette -0.033855
RPS12 ribosomal protein S12 -0.0333841
RPL4 ribosomal protein L4 -0.0327416
RPS13 ribosomal protein S13 -0.032732
RPL38 ribosomal protein L38 -0.0313137
RPL26 ribosomal protein L26 -0.031262
RPL28 ribosomal protein L28 -0.0310413
HSPB1 heat shock 27kDa protein 1 -0.0310079
PHF3 PHD finger protein 3 -0.030043
RPS27A ribosomal protein S27a -0.0292857
MT2A metallothionein 2A -0.0291313
GOLGA4 golgin A4 -0.0290072
RPS24 ribosomal protein S24 -0.0288796
RPLP1 ribosomal protein, large, P1 -0.0286071
RPLP0 ribosomal protein, large, P0 -0.0284563
ENO2 enolase 2 (gamma, neuronal) -0.0275782
LCORL ligand dependent nuclear receptor corepressor-like -0.0268125
TXNRD1 thioredoxin reductase 1 -0.0268042
PRELID2 PRELI domain containing 2 -0.0264497
SQSTM1 sequestosome 1 -0.0259816
RPL8 ribosomal protein L8 -0.0259246
RPS29 ribosomal protein S29 -0.0258692
RACK1 receptor for activated C kinase 1 -0.0258255
RPL32 ribosomal protein L32 -0.0258234
LPP LIM domain containing preferred translocation partner in lipoma -0.0256245
USP3 ubiquitin specific peptidase 3 -0.0256009
RPS23 ribosomal protein S23 -0.0254629
RPS11 ribosomal protein S11 -0.0253453
ARHGAP5 Rho GTPase activating protein 5 -0.0245334
ATF4 activating transcription factor 4 -0.024476
RPS5 ribosomal protein S5 -0.0242296
ZNF292 zinc finger protein 292 -0.0233581
RPS21 ribosomal protein S21 -0.0229594
RPL17-C18ORF32 RPL17-C18orf32 readthrough -0.0228763
CSDE1 cold shock domain containing E1, RNA-binding -0.0227063
CCNI cyclin I -0.0226524
CNOT6L CCR4-NOT transcription complex, subunit 6-like -0.0224176
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0222692
RPL5 ribosomal protein L5 -0.0221958
RPLP2 ribosomal protein, large, P2 -0.0221949
RPL11 ribosomal protein L11 -0.0216841
RAD18 RAD18 E3 ubiquitin protein ligase -0.0216068
TMEM263 transmembrane protein 263 -0.0214226
RPL37 ribosomal protein L37 -0.0211524
RPS16 ribosomal protein S16 -0.0210084
LOC112694756 uncharaterized LOC112694756 -0.0208974
BCOR BCL6 corepressor -0.0206408
EEF2 eukaryotic translation elongation factor 2 -0.0206158
TMEM123 transmembrane protein 123 -0.0202866
HMGA1 high mobility group AT-hook 1 -0.0198558
EPB41 erythrocyte membrane protein band 4.1 -0.0195971
RPL34 ribosomal protein L34 -0.0193432
BTG3 BTG family, member 3 -0.0192903
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0191962
NCOR1 nuclear receptor corepressor 1 -0.0188567
BABAM2 BRISC and BRCA1 A complex member 2 -0.0187767
CENATAC centrosomal AT-AC splicing factor -0.0184467
S100A4 S100 calcium binding protein A4 -0.0183836
FOXO3 forkhead box O3 -0.0182802
CACNB4 calcium channel, voltage-dependent, beta 4 subunit -0.0180088
ATP5F1E ATP synthase F1 subunit epsilon -0.017881
TIMP3 TIMP metallopeptidase inhibitor 3 -0.0178775
CTIF CBP80/20-dependent translation initiation factor -0.0177956
WASF2 WAS protein family, member 2 -0.0175905
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0175067
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 -0.017431
ABCA5 ATP-binding cassette, sub-family A (ABC1), member 5 -0.0173487
RPS15 ribosomal protein S15 -0.0172739
RPL30 ribosomal protein L30 -0.0169444
PTTG1IP pituitary tumor-transforming 1 interacting protein -0.0169099
ANKIB1 ankyrin repeat and IBR domain containing 1 -0.0167109
ZFP36L1 ZFP36 ring finger protein-like 1 -0.0166113
CDC73 cell division cycle 73 -0.0164316
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0163824
DENND1A DENN/MADD domain containing 1A -0.0163821
FHIT fragile histidine triad -0.0162388
ARID2 AT rich interactive domain 2 (ARID, RFX-like) -0.0162234
ZBTB20 zinc finger and BTB domain containing 20 -0.016166
RHBDD1 rhomboid domain containing 1 -0.0161382
RPS3 ribosomal protein S3 -0.0161033
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.016078
TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) -0.015998