Altretamine_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Altretamine perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Altretamine_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
DST dystonin 0.12419
ERRFI1 ERBB receptor feedback inhibitor 1 0.119513
TP63 tumor protein p63 0.0966734
TMSB4X thymosin beta 4, X-linked 0.0837445
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0701513
EEF2 eukaryotic translation elongation factor 2 0.0653547
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.0641954
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0574526
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0568129
RUNX1 runt-related transcription factor 1 0.0548387
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0542911
ENO1 enolase 1, (alpha) 0.0518819
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0510502
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0500509
NAMPT nicotinamide phosphoribosyltransferase 0.0458472
EHBP1 EH domain binding protein 1 0.0454227
TRIO trio Rho guanine nucleotide exchange factor 0.0451536
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0450922
DPYD dihydropyrimidine dehydrogenase 0.0444093
DLG1 discs, large homolog 1 (Drosophila) 0.0441834
ADAM10 ADAM metallopeptidase domain 10 0.0437238
APP amyloid beta (A4) precursor protein 0.0436101
SPAG9 sperm associated antigen 9 0.0427145
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0404756
CADM2 cell adhesion molecule 2 0.0386651
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.0371345
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0369753
KDM3A lysine (K)-specific demethylase 3A 0.0366937
RBM39 RNA binding motif protein 39 0.0365024
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0363527
STAT1 signal transducer and activator of transcription 1, 91kDa 0.0358546
CCNL1 cyclin L1 0.0356934
TNS3 tensin 3 0.0355275
ZNF292 zinc finger protein 292 0.0355016
TSC22D1 TSC22 domain family, member 1 0.0352181
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0351994
CFAP299 cilia and flagella associated protein 299 0.034959
EFNA5 ephrin-A5 0.034359
FAF1 Fas (TNFRSF6) associated factor 1 0.0343225
PLK2 polo-like kinase 2 0.0336072
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0334003
HDAC9 histone deacetylase 9 0.0327141
WDR43 WD repeat domain 43 0.0326144
PGK1 phosphoglycerate kinase 1 0.0324456
SQSTM1 sequestosome 1 0.0323102
SET SET nuclear proto-oncogene 0.0312517
EIF3A eukaryotic translation initiation factor 3, subunit A 0.031193
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 0.0308793
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0303658
NCKAP1 NCK-associated protein 1 0.0302366
UBC ubiquitin C 0.0301454
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0299796
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0297961
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.029791
MACF1 microtubule-actin crosslinking factor 1 0.0293174
TFRC transferrin receptor 0.0291891
EIF4H eukaryotic translation initiation factor 4H 0.0286632
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0285054
NUP58 nucleoporin 58 0.0282535
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0281135
EPHA4 EPH receptor A4 0.0280818
MARCHF6 membrane associated ring-CH-type finger 6 0.0278711
KRT18 keratin 18, type I 0.0278302
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.027691
SMYD3 SET and MYND domain containing 3 0.0270229
MATR3 matrin 3 0.0270202
RAD51B RAD51 paralog B 0.0266638
HSPA8 heat shock 70kDa protein 8 0.0264572
TMEM123 transmembrane protein 123 0.0261763
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0259168
CAPRIN2 caprin family member 2 0.0259114
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0258995
EREG epiregulin 0.0254863
DENND1A DENN/MADD domain containing 1A 0.0253411
MYOF myoferlin 0.0251998
PUM2 pumilio RNA-binding family member 2 0.0246543
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0246317
UBAP2L ubiquitin associated protein 2-like 0.0244773
GARS1 glycyl-tRNA synthetase 1 0.0237831
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 0.0237551
MYH9 myosin, heavy chain 9, non-muscle 0.0236375
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0234272
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0233582
RPS2 ribosomal protein S2 0.0233231
TTC3 tetratricopeptide repeat domain 3 0.023091
HOOK2 hook microtubule-tethering protein 2 0.0228061
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 0.0227258
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0226094
CXCL8 chemokine (C-X-C motif) ligand 8 0.0225045
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0224207
MEF2A myocyte enhancer factor 2A 0.0224044
NEK7 NIMA-related kinase 7 0.0223109
PDE10A phosphodiesterase 10A 0.0219964
TSC22D2 TSC22 domain family, member 2 0.0219176
MINDY2 MINDY lysine 48 deubiquitinase 2 0.021902
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0217118
RAB27B RAB27B, member RAS oncogene family 0.0215447
PUM1 pumilio RNA-binding family member 1 0.0214416
KDM4C lysine (K)-specific demethylase 4C 0.021436
ESYT2 extended synaptotagmin-like protein 2 0.0213494

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.270775
VIM vimentin -0.169692
MT2A metallothionein 2A -0.159112
TMSB10 thymosin beta 10 -0.090735
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0781826
PTMA prothymosin, alpha -0.0616952
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0504983
HMGA1 high mobility group AT-hook 1 -0.0476372
RPL35A ribosomal protein L35a -0.0466311
TXNIP thioredoxin interacting protein -0.045853
LOC112694756 uncharaterized LOC112694756 -0.045558
FTL ferritin, light polypeptide -0.0443796
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0405728
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0365259
TNFRSF6B tumor necrosis factor receptor superfamily, member 6b, decoy -0.0357795
POTEF POTE ankyrin domain family, member F -0.0339585
CENPF centromere protein F, 350/400kDa -0.0329115
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0322709
ENO2 enolase 2 (gamma, neuronal) -0.0314642
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0296146
EGR1 early growth response 1 -0.0295638
P4HB prolyl 4-hydroxylase, beta polypeptide -0.0293457
PDIA3 protein disulfide isomerase family A, member 3 -0.0257071
MT1X metallothionein 1X -0.0250716
SMC4 structural maintenance of chromosomes 4 -0.0248723
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 -0.0239336
RPS6 ribosomal protein S6 -0.0220299
PFN1 profilin 1 -0.021808
CENPE centromere protein E, 312kDa -0.0213487
IFITM1 interferon induced transmembrane protein 1 -0.0211428
TAPBP TAP binding protein (tapasin) -0.0198233
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0193947
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0192161
HLA-A major histocompatibility complex, class I, A -0.0182416
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0170264
S100A9 S100 calcium binding protein A9 -0.0163971
MYADM myeloid-associated differentiation marker -0.0163063
PTMS parathymosin -0.0157135
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0156872
CCDC88A coiled-coil domain containing 88A -0.0156562
RAB7A RAB7A, member RAS oncogene family -0.0154709
FLNB filamin B, beta -0.0148354
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0147869
TP53 tumor protein p53 -0.0145846
SGO2 shugoshin 2 -0.0143696
LMAN1 lectin, mannose-binding, 1 -0.0143318
CBX3 chromobox homolog 3 -0.0141643
NAV2 neuron navigator 2 -0.0138619
S100A10 S100 calcium binding protein A10 -0.0136217
ATP5F1B ATP synthase F1 subunit beta -0.0136176
APLP2 amyloid beta (A4) precursor-like protein 2 -0.0134802
RPLP1 ribosomal protein, large, P1 -0.0134051
GART phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase -0.0131209
SEC62 SEC62 homolog (S. cerevisiae) -0.0130932
SPRY4 sprouty homolog 4 (Drosophila) -0.012696
MT1E metallothionein 1E -0.012678
RPS14 ribosomal protein S14 -0.0126625
SON SON DNA binding protein -0.0126159
DDX41 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 -0.0123829
SLC20A1 solute carrier family 20 (phosphate transporter), member 1 -0.0123247
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0122926
ATN1 atrophin 1 -0.0122705
S100A6 S100 calcium binding protein A6 -0.0121126
RPL28 ribosomal protein L28 -0.0117921
SLC38A2 solute carrier family 38, member 2 -0.0115993
NUCB2 nucleobindin 2 -0.0115115
RPL12 ribosomal protein L12 -0.0113091
UBE2D2 ubiquitin-conjugating enzyme E2D 2 -0.0112587
SEPTIN7 septin 7 -0.0111087
UBA1 ubiquitin-like modifier activating enzyme 1 -0.0110056
HELZ2 helicase with zinc finger 2, transcriptional coactivator -0.0108291
IFI6 interferon, alpha-inducible protein 6 -0.010737
KDM5B lysine (K)-specific demethylase 5B -0.0106966
KIF14 kinesin family member 14 -0.0106749
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1 -0.0106494
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0105372
UBE2C ubiquitin-conjugating enzyme E2C -0.0105056
RPS13 ribosomal protein S13 -0.0104833
UBE2B ubiquitin-conjugating enzyme E2B -0.0104041
RPL8 ribosomal protein L8 -0.0103971
N4BP2L2 NEDD4 binding protein 2-like 2 -0.0102166
IFITM3 interferon induced transmembrane protein 3 -0.0102022
RNASE1 ribonuclease, RNase A family, 1 (pancreatic) -0.0101117
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0100789
TBC1D23 TBC1 domain family, member 23 -0.00988057
TMBIM6 transmembrane BAX inhibitor motif containing 6 -0.00986257
TUBB6 tubulin, beta 6 class V -0.00979802
RPS23 ribosomal protein S23 -0.0097592
SMC3 structural maintenance of chromosomes 3 -0.00973551
FKBP10 FK506 binding protein 10, 65 kDa -0.00972752
RPL19 ribosomal protein L19 -0.00970909
TUBA1B tubulin, alpha 1b -0.00970517
COPB2 coatomer protein complex, subunit beta 2 (beta prime) -0.00964453
UBXN4 UBX domain protein 4 -0.00957873
WBP2 WW domain binding protein 2 -0.00956072
DEK DEK proto-oncogene -0.00946348
RBM25 RNA binding motif protein 25 -0.00943244
RPL27 ribosomal protein L27 -0.00943165
PCBP1 poly(rC) binding protein 1 -0.00939266
ZFHX3 zinc finger homeobox 3 -0.00935108