Altretamine_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Altretamine perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Altretamine_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTH1 ferritin, heavy polypeptide 1 0.14722
PABPC1 poly(A) binding protein, cytoplasmic 1 0.141011
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.134575
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.10867
EEF2 eukaryotic translation elongation factor 2 0.0929534
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0862633
LDHA lactate dehydrogenase A 0.0805401
CXCL8 chemokine (C-X-C motif) ligand 8 0.0792849
CALR calreticulin 0.0678139
ENO1 enolase 1, (alpha) 0.0608974
CCNL1 cyclin L1 0.0535697
NQO1 NAD(P)H dehydrogenase, quinone 1 0.0528246
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0503168
ECT2 epithelial cell transforming 2 0.0463418
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0453229
RRM2 ribonucleotide reductase M2 0.0424946
TPM3 tropomyosin 3 0.0413017
ANXA5 annexin A5 0.0365129
ADGRG6 adhesion G protein-coupled receptor G6 0.0358307
IGF2 insulin-like growth factor 2 0.0342225
HYOU1 hypoxia up-regulated 1 0.0337337
ANKRD28 ankyrin repeat domain 28 0.0335389
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.0332616
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0318232
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0312963
APP amyloid beta (A4) precursor protein 0.0311961
TFG TRK-fused gene 0.0309907
NUP58 nucleoporin 58 0.0308588
PDIA6 protein disulfide isomerase family A, member 6 0.0308368
CSDE1 cold shock domain containing E1, RNA-binding 0.0299838
VMP1 vacuole membrane protein 1 0.0293275
UBC ubiquitin C 0.0289117
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.0284718
COPA coatomer protein complex, subunit alpha 0.0281483
EIF4H eukaryotic translation initiation factor 4H 0.0278654
ARHGAP12 Rho GTPase activating protein 12 0.0278482
TMEM123 transmembrane protein 123 0.0273432
PUM1 pumilio RNA-binding family member 1 0.0272865
NRG1 neuregulin 1 0.0272334
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0271683
YES1 YES proto-oncogene 1, Src family tyrosine kinase 0.0268524
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.0266734
UGCG UDP-glucose ceramide glucosyltransferase 0.026645
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle 0.0264164
FNBP1L formin binding protein 1-like 0.0262625
RPLP0 ribosomal protein, large, P0 0.0259938
KHDC4 KH domain containing 4, pre-mRNA splicing factor 0.0258911
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.0258727
DNMT1 DNA (cytosine-5-)-methyltransferase 1 0.0258188
NOLC1 nucleolar and coiled-body phosphoprotein 1 0.0256702
PCBP2 poly(rC) binding protein 2 0.0252448
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0243019
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa 0.0242776
MYOF myoferlin 0.0239568
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.0237087
COTL1 coactosin-like F-actin binding protein 1 0.0236143
UBASH3B ubiquitin associated and SH3 domain containing B 0.0233388
CD109 CD109 molecule 0.023257
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.022964
ANXA1 annexin A1 0.0226734
CHN1 chimerin 1 0.0225024
PAWR PRKC, apoptosis, WT1, regulator 0.0222614
UIMC1 ubiquitin interaction motif containing 1 0.022033
PGK1 phosphoglycerate kinase 1 0.0219714
ZNF292 zinc finger protein 292 0.0217397
PKM pyruvate kinase, muscle 0.021632
CALU calumenin 0.0213335
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0211528
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha 0.0211459
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.0208766
DDB1 damage-specific DNA binding protein 1, 127kDa 0.0205964
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.020568
TPD52 tumor protein D52 0.0205409
EXT1 exostosin glycosyltransferase 1 0.0203499
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.020075
THBS1 thrombospondin 1 0.0198926
HMGB1 high mobility group box 1 0.0196041
TPM4 tropomyosin 4 0.0195649
PRR16 proline rich 16 0.019529
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0194433
CCT5 chaperonin containing TCP1, subunit 5 (epsilon) 0.0194409
ELL2 elongation factor, RNA polymerase II, 2 0.0193912
EIF4A3 eukaryotic translation initiation factor 4A3 0.0192964
TMED10 transmembrane emp24-like trafficking protein 10 (yeast) 0.0191378
S100A10 S100 calcium binding protein A10 0.0191139
ELOVL5 ELOVL fatty acid elongase 5 0.0190697
PTK2 protein tyrosine kinase 2 0.0188843
CCT4 chaperonin containing TCP1, subunit 4 (delta) 0.0188652
DLGAP5 discs, large (Drosophila) homolog-associated protein 5 0.0186088
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0185379
AK1 adenylate kinase 1 0.0184965
TRIO trio Rho guanine nucleotide exchange factor 0.0182276
WDR43 WD repeat domain 43 0.0181766
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide 0.0181686
IST1 increased sodium tolerance 1 homolog (yeast) 0.0178067
TTC28 tetratricopeptide repeat domain 28 0.0177771
GARS1 glycyl-tRNA synthetase 1 0.017769
RACGAP1 Rac GTPase activating protein 1 0.0177492
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0176807
RNMT RNA (guanine-7-) methyltransferase 0.0176243

decreased expression

Symbol Name Standardized Value
MT2A metallothionein 2A -0.280121
PM20D1 peptidase M20 domain containing 1 -0.202071
PDE4D phosphodiesterase 4D, cAMP-specific -0.129941
GRAMD1B GRAM domain containing 1B -0.127046
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.116841
TMSB10 thymosin beta 10 -0.105023
RPS2 ribosomal protein S2 -0.0807112
RPL19 ribosomal protein L19 -0.0789605
TM4SF1 transmembrane 4 L six family member 1 -0.073719
RPLP1 ribosomal protein, large, P1 -0.0667581
TFPI2 tissue factor pathway inhibitor 2 -0.0667097
EIF1 eukaryotic translation initiation factor 1 -0.0653193
RPL37A ribosomal protein L37a -0.0634545
NR4A2 nuclear receptor subfamily 4, group A, member 2 -0.0632941
SAMD4A sterile alpha motif domain containing 4A -0.061027
DSCAM Down syndrome cell adhesion molecule -0.0598751
DOCK5 dedicator of cytokinesis 5 -0.0583502
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0579195
IER3 immediate early response 3 -0.0575696
RPS6 ribosomal protein S6 -0.0533398
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0518481
RPS8 ribosomal protein S8 -0.0509609
RPS27A ribosomal protein S27a -0.0488501
SMOC1 SPARC related modular calcium binding 1 -0.0463582
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0460715
WWOX WW domain containing oxidoreductase -0.0455974
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 -0.0433021
CFLAR CASP8 and FADD-like apoptosis regulator -0.043273
PTP4A1 protein tyrosine phosphatase type IVA, member 1 -0.043204
SVIL supervillin -0.0428971
GOLT1B golgi transport 1B -0.0418739
ZFAND3 zinc finger, AN1-type domain 3 -0.0416142
RPS21 ribosomal protein S21 -0.0410316
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0407019
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0401318
RTN4 reticulon 4 -0.0395799
RPL30 ribosomal protein L30 -0.0394818
NIPBL Nipped-B homolog (Drosophila) -0.0394125
ATXN1 ataxin 1 -0.0390798
RPL26 ribosomal protein L26 -0.039026
AKAP12 A kinase (PRKA) anchor protein 12 -0.038304
EGFR epidermal growth factor receptor -0.0382926
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0378906
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 -0.0371895
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0369113
DENND4A DENN/MADD domain containing 4A -0.0362513
FAM107B family with sequence similarity 107, member B -0.0360006
STC1 stanniocalcin 1 -0.0355577
PFDN2 prefoldin subunit 2 -0.0355171
WAC WW domain containing adaptor with coiled-coil -0.0353259
RPL5 ribosomal protein L5 -0.0352998
THSD4 thrombospondin, type I, domain containing 4 -0.0350867
RPS12 ribosomal protein S12 -0.0349011
EIF5B eukaryotic translation initiation factor 5B -0.0348657
FTL ferritin, light polypeptide -0.0347686
RPL9 ribosomal protein L9 -0.0332342
KYNU kynureninase -0.0331205
LANCL1 LanC lantibiotic synthetase component C-like 1 (bacterial) -0.0330792
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0330057
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) -0.0329044
KANSL1L KAT8 regulatory NSL complex subunit 1-like -0.0328085
KTN1 kinectin 1 (kinesin receptor) -0.0326639
ZFHX3 zinc finger homeobox 3 -0.0326472
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.0323237
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 -0.0322109
USP34 ubiquitin specific peptidase 34 -0.0318235
RPS23 ribosomal protein S23 -0.0314958
PTMA prothymosin, alpha -0.0313595
ARHGAP26 Rho GTPase activating protein 26 -0.0305952
RPL36 ribosomal protein L36 -0.0305653
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0303863
PAPOLA poly(A) polymerase alpha -0.0303435
EXOC6B exocyst complex component 6B -0.0302866
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0299616
PUM2 pumilio RNA-binding family member 2 -0.0296289
BASP1 brain abundant, membrane attached signal protein 1 -0.0295898
CCL5 chemokine (C-C motif) ligand 5 -0.029549
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.029447
ARID1B AT rich interactive domain 1B (SWI1-like) -0.029329
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0292295
NAP1L1 nucleosome assembly protein 1-like 1 -0.0292189
RPL23 ribosomal protein L23 -0.0283456
CMIP c-Maf inducing protein -0.0280512
ZBTB20 zinc finger and BTB domain containing 20 -0.0279888
NCOA1 nuclear receptor coactivator 1 -0.0279197
RPL7 ribosomal protein L7 -0.0278933
CCT3 chaperonin containing TCP1, subunit 3 (gamma) -0.0278158
GOLGB1 golgin B1 -0.0277886
RPS25 ribosomal protein S25 -0.0276307
RPL28 ribosomal protein L28 -0.027073
MNAT1 MNAT CDK-activating kinase assembly factor 1 -0.0269816
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 -0.0268371
S100A6 S100 calcium binding protein A6 -0.0266824
BMP6 bone morphogenetic protein 6 -0.0266072
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.026468
RPS19 ribosomal protein S19 -0.0263465
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0261708
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0261262
SETD5 SET domain containing 5 -0.0258729
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0256745