Altretamine_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Altretamine perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Altretamine_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FN1 fibronectin 1 0.21743
NDRG1 N-myc downstream regulated 1 0.153832
IGF2 insulin-like growth factor 2 0.132516
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.122206
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.102983
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0778765
PRELID2 PRELI domain containing 2 0.073939
RNF149 ring finger protein 149 0.0706484
UBA2 ubiquitin-like modifier activating enzyme 2 0.066997
RPS8 ribosomal protein S8 0.0658958
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0652784
METTL15 methyltransferase like 15 0.0645783
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0644872
PICALM phosphatidylinositol binding clathrin assembly protein 0.0642629
PDPK1 3-phosphoinositide dependent protein kinase 1 0.0637088
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0631833
EIF4B eukaryotic translation initiation factor 4B 0.0629715
NFIB nuclear factor I/B 0.0628343
B2M beta-2-microglobulin 0.0621097
EIF1 eukaryotic translation initiation factor 1 0.0619353
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) 0.0611596
EGLN3 egl-9 family hypoxia-inducible factor 3 0.0603306
SBF2 SET binding factor 2 0.0600187
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0586186
NPTN neuroplastin 0.0567718
PCGF5 polycomb group ring finger 5 0.0552108
AFF1 AF4/FMR2 family, member 1 0.0545414
YEATS2 YEATS domain containing 2 0.0540735
NAMPT nicotinamide phosphoribosyltransferase 0.0538414
RIGI RNA sensor RIG-I 0.0537341
PTTG1IP pituitary tumor-transforming 1 interacting protein 0.053118
DST dystonin 0.0531179
KDM7A lysine (K)-specific demethylase 7A 0.0528457
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0526362
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.0526091
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0525493
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0512139
ANKHD1 ankyrin repeat and KH domain containing 1 0.0507108
MYH9 myosin, heavy chain 9, non-muscle 0.0505126
ANKRD11 ankyrin repeat domain 11 0.0502529
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0490992
DLG1 discs, large homolog 1 (Drosophila) 0.0489068
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0483101
DICER1 dicer 1, ribonuclease type III 0.0476169
BTBD9 BTB (POZ) domain containing 9 0.0476046
CXXC1 CXXC finger protein 1 0.0471032
EEF2 eukaryotic translation elongation factor 2 0.0467382
LAMB3 laminin, beta 3 0.0465221
NKD1 naked cuticle homolog 1 (Drosophila) 0.0464715
KRT18 keratin 18, type I 0.0457521
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) 0.0453445
HOOK2 hook microtubule-tethering protein 2 0.045238
MXI1 MAX interactor 1, dimerization protein 0.0450577
NFKBIZ nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, zeta 0.0441747
COPB2 coatomer protein complex, subunit beta 2 (beta prime) 0.0433705
GOLGA4 golgin A4 0.0426468
MT2A metallothionein 2A 0.0421329
RNF24 ring finger protein 24 0.0419816
DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked 0.0416955
MAP1B microtubule-associated protein 1B 0.0410451
ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 0.0406548
TTC3 tetratricopeptide repeat domain 3 0.0403306
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like 0.0397392
FAF1 Fas (TNFRSF6) associated factor 1 0.0383487
RB1CC1 RB1-inducible coiled-coil 1 0.0382048
NBAS neuroblastoma amplified sequence 0.0380919
CARD16 caspase recruitment domain family, member 16 0.0379646
PCBP2 poly(rC) binding protein 2 0.0378737
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0377427
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 0.0377352
CEMIP2 cell migration inducing hyaluronidase 2 0.03718
WDPCP WD repeat containing planar cell polarity effector 0.0370719
DSPP dentin sialophosphoprotein 0.0370188
GHITM growth hormone inducible transmembrane protein 0.0369188
IARS1 isoleucyl-tRNA synthetase 1 0.0368366
VPS13C vacuolar protein sorting 13 homolog C (S. cerevisiae) 0.0368227
COG5 component of oligomeric golgi complex 5 0.0367706
N4BP2L2 NEDD4 binding protein 2-like 2 0.0367436
HDAC8 histone deacetylase 8 0.0366491
RBM39 RNA binding motif protein 39 0.0364593
PRKG1 protein kinase, cGMP-dependent, type I 0.0364395
RPS12 ribosomal protein S12 0.0360451
RPS6KC1 ribosomal protein S6 kinase, 52kDa, polypeptide 1 0.0359098
PDE8A phosphodiesterase 8A 0.0358038
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0357267
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.0356886
KDM3A lysine (K)-specific demethylase 3A 0.0354936
FLNB filamin B, beta 0.0353008
ZCCHC7 zinc finger, CCHC domain containing 7 0.034942
SOD2 superoxide dismutase 2, mitochondrial 0.0348252
ZNF148 zinc finger protein 148 0.0346149
RPS17 ribosomal protein S17 0.0346067
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 0.0343666
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0342021
SLC39A8 solute carrier family 39 (zinc transporter), member 8 0.0338187
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0336261
RORA RAR-related orphan receptor A 0.0334434
ADNP activity-dependent neuroprotector homeobox 0.0333148
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.0331372
RPS27A ribosomal protein S27a 0.0330716

decreased expression

Symbol Name Standardized Value
LMO7 LIM domain 7 -0.211296
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.122342
VIM vimentin -0.117033
BACE2 beta-site APP-cleaving enzyme 2 -0.111658
ATOSA atos homolog A -0.103964
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.103253
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0953285
PTMA prothymosin, alpha -0.0932218
NCOA3 nuclear receptor coactivator 3 -0.0931174
AHNAK AHNAK nucleoprotein -0.0896894
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0841325
SAMD4A sterile alpha motif domain containing 4A -0.0815038
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa) -0.0812631
SRPK2 SRSF protein kinase 2 -0.0795038
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0748739
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0730838
RPS6 ribosomal protein S6 -0.0725307
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0723575
UBE2H ubiquitin-conjugating enzyme E2H -0.0715444
TMSB10 thymosin beta 10 -0.0649388
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0648313
SNX9 sorting nexin 9 -0.064325
MUC16 mucin 16, cell surface associated -0.0639207
SLMAP sarcolemma associated protein -0.0632277
RPL19 ribosomal protein L19 -0.0626483
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 -0.0619423
BTG1 B-cell translocation gene 1, anti-proliferative -0.059242
EGFR epidermal growth factor receptor -0.0584157
TNPO1 transportin 1 -0.0579196
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0574133
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.0559917
FTL ferritin, light polypeptide -0.0555553
KRT17 keratin 17, type I -0.0553348
TMOD3 tropomodulin 3 (ubiquitous) -0.0541987
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0541792
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 -0.0535832
JMJD1C jumonji domain containing 1C -0.0533837
MYO1E myosin IE -0.0530094
SAMD12 sterile alpha motif domain containing 12 -0.0526633
TXNIP thioredoxin interacting protein -0.0526259
H3-3B H3.3 histone B -0.0526059
MKLN1 muskelin 1, intracellular mediator containing kelch motifs -0.0522427
TJP1 tight junction protein 1 -0.0522381
S100A6 S100 calcium binding protein A6 -0.0517747
SVIL supervillin -0.0515794
EZR ezrin -0.0514942
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0514917
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -0.0497381
RBM47 RNA binding motif protein 47 -0.0494413
ANXA1 annexin A1 -0.0489522
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0483386
CUX1 cut-like homeobox 1 -0.0462697
KTN1 kinectin 1 (kinesin receptor) -0.0456684
RPL35A ribosomal protein L35a -0.0453678
CDK13 cyclin-dependent kinase 13 -0.0453024
PPP1R12A protein phosphatase 1, regulatory subunit 12A -0.0444887
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0431521
KATNBL1 katanin p80 subunit B-like 1 -0.042862
NT5C2 5'-nucleotidase, cytosolic II -0.0422757
SQSTM1 sequestosome 1 -0.0422717
S100A9 S100 calcium binding protein A9 -0.0416655
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0415974
MAN2A1 mannosidase, alpha, class 2A, member 1 -0.0414988
CLIP1 CAP-GLY domain containing linker protein 1 -0.041455
HMGA1 high mobility group AT-hook 1 -0.0413714
RALA v-ral simian leukemia viral oncogene homolog A (ras related) -0.041304
CD2AP CD2-associated protein -0.0410973
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0410655
GULP1 GULP, engulfment adaptor PTB domain containing 1 -0.0410224
MPRIP myosin phosphatase Rho interacting protein -0.0403438
BZW1 basic leucine zipper and W2 domains 1 -0.0398014
PMEPA1 prostate transmembrane protein, androgen induced 1 -0.0390131
TPR translocated promoter region, nuclear basket protein -0.0387308
SYNE2 spectrin repeat containing, nuclear envelope 2 -0.0383606
ACTG1 actin gamma 1 -0.0380318
TRIO trio Rho guanine nucleotide exchange factor -0.0377372
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0376323
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa -0.0376242
LGALS3 lectin, galactoside-binding, soluble, 3 -0.0373419
ATXN1 ataxin 1 -0.0371501
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0369992
SLC12A6 solute carrier family 12 (potassium/chloride transporter), member 6 -0.0369599
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3 -0.0359194
POTEF POTE ankyrin domain family, member F -0.0358128
EXT1 exostosin glycosyltransferase 1 -0.0357208
BAIAP2L1 BAI1-associated protein 2-like 1 -0.0356209
MACC1 metastasis associated in colon cancer 1 -0.0355972
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0355788
NHSL1 NHS-like 1 -0.0354759
HSPD1 heat shock 60kDa protein 1 (chaperonin) -0.0350252
JUN jun proto-oncogene -0.0347828
CSNK1A1 casein kinase 1, alpha 1 -0.0341868
TMEM123 transmembrane protein 123 -0.0339119
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 -0.0338035
RAB1A RAB1A, member RAS oncogene family -0.0337193
PLEKHA1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 -0.033647
CEMIP cell migration inducing protein, hyaluronan binding -0.0331911
CAPN2 calpain 2, (m/II) large subunit -0.0326763
TSC22D2 TSC22 domain family, member 2 -0.0323738
ABLIM1 actin binding LIM protein 1 -0.0320076