Altretamine_NCI-H596 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Altretamine perturbation in NCI-H596 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Altretamine_NCI-H596 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
ZBTB20 zinc finger and BTB domain containing 20 0.10147
BTBD9 BTB (POZ) domain containing 9 0.10017
GSK3B glycogen synthase kinase 3 beta 0.0934788
NAMPT nicotinamide phosphoribosyltransferase 0.085113
PRELID2 PRELI domain containing 2 0.0806308
RAB7A RAB7A, member RAS oncogene family 0.0776572
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.0752019
RUNX1 runt-related transcription factor 1 0.0751899
ALCAM activated leukocyte cell adhesion molecule 0.0745129
SLK STE20-like kinase 0.0726907
ZFAND3 zinc finger, AN1-type domain 3 0.0712534
TAS2R14 taste receptor, type 2, member 14 0.0704831
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0703261
NF1 neurofibromin 1 0.0700186
NBAS neuroblastoma amplified sequence 0.0680467
IGFBP5 insulin-like growth factor binding protein 5 0.0676365
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0658448
TPM4 tropomyosin 4 0.0654618
RBM15 RNA binding motif protein 15 0.0646077
PUM1 pumilio RNA-binding family member 1 0.0643885
CEMIP cell migration inducing protein, hyaluronan binding 0.0633475
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0622913
MSI2 musashi RNA-binding protein 2 0.0612465
ANKHD1 ankyrin repeat and KH domain containing 1 0.0594976
FNDC3B fibronectin type III domain containing 3B 0.059354
EZR ezrin 0.0567531
TRIO trio Rho guanine nucleotide exchange factor 0.0524773
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0514882
GOLGA4 golgin A4 0.051358
PTPRK protein tyrosine phosphatase, receptor type, K 0.0494432
TXNIP thioredoxin interacting protein 0.0493985
MYH9 myosin, heavy chain 9, non-muscle 0.0493256
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0477151
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0467012
CANX calnexin 0.0462808
PABPC1 poly(A) binding protein, cytoplasmic 1 0.045666
EGFR epidermal growth factor receptor 0.0430871
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0430656
JMJD1C jumonji domain containing 1C 0.0428405
DSCAM Down syndrome cell adhesion molecule 0.0424233
KMT2C lysine (K)-specific methyltransferase 2C 0.0423449
SQSTM1 sequestosome 1 0.0408501
PRKCA protein kinase C, alpha 0.04003
ANKRD17 ankyrin repeat domain 17 0.0394137
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 0.0389105
EXOC4 exocyst complex component 4 0.038586
PUM2 pumilio RNA-binding family member 2 0.0384801
ETNK1 ethanolamine kinase 1 0.0371998
IGF2BP2 insulin-like growth factor 2 mRNA binding protein 2 0.0361705
LRP1B low density lipoprotein receptor-related protein 1B 0.0361478
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0350344
ERRFI1 ERBB receptor feedback inhibitor 1 0.0340272
SAMD4A sterile alpha motif domain containing 4A 0.033275
CDCP1 CUB domain containing protein 1 0.032594
CD44 CD44 molecule (Indian blood group) 0.0322647
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) 0.0316728
FXR1 fragile X mental retardation, autosomal homolog 1 0.0311817
ANKRD12 ankyrin repeat domain 12 0.0301642
ZMYND8 zinc finger, MYND-type containing 8 0.0268592
MAP3K20 mitogen-activated protein kinase kinase kinase 20 0.0264051
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0260013
KMT2E lysine (K)-specific methyltransferase 2E 0.0258872
SLTM SAFB-like, transcription modulator 0.0251962
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0233219
HMGA2 high mobility group AT-hook 2 0.0226226
RBM26 RNA binding motif protein 26 0.0216675
RAB1A RAB1A, member RAS oncogene family 0.020716
TPD52 tumor protein D52 0.0204703
ASPH aspartate beta-hydroxylase 0.019755
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0193489
TOP1 topoisomerase (DNA) I 0.019343
GPATCH2L G patch domain containing 2-like 0.017644
CCNL1 cyclin L1 0.0175722
MORF4L2 mortality factor 4 like 2 0.0163762
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0158679
BIRC6 baculoviral IAP repeat containing 6 0.0156045
ELL2 elongation factor, RNA polymerase II, 2 0.0151098
BIRC3 baculoviral IAP repeat containing 3 0.0148481
PARD3 par-3 family cell polarity regulator 0.0147613
MCL1 myeloid cell leukemia 1 0.0140726
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0133862
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.0131247
MYO1E myosin IE 0.0129808
RPL23 ribosomal protein L23 0.0122039
CSNK1A1 casein kinase 1, alpha 1 0.0119081
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 0.0112409
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0111008
RPS6 ribosomal protein S6 0.0110805
MACF1 microtubule-actin crosslinking factor 1 0.01071
SMC4 structural maintenance of chromosomes 4 0.0106787
ENO1 enolase 1, (alpha) 0.00842555
HOOK2 hook microtubule-tethering protein 2 0.00825556
LDHA lactate dehydrogenase A 0.00651196
PGK1 phosphoglycerate kinase 1 0.00639923
INHBA inhibin, beta A 0.00616906
MMP1 matrix metallopeptidase 1 0.00616839
N4BP2L2 NEDD4 binding protein 2-like 2 0.00542678
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.00528163
SEC31A SEC31 homolog A (S. cerevisiae) 0.00476247
MED13L mediator complex subunit 13-like 0.00451156

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.215617
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.137758
VIM vimentin -0.133182
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.124139
EFNA5 ephrin-A5 -0.0888228
PTMA prothymosin, alpha -0.0838945
NDRG1 N-myc downstream regulated 1 -0.0805537
FN1 fibronectin 1 -0.0800955
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0745943
IGF2 insulin-like growth factor 2 -0.0688488
GPC6 glypican 6 -0.0676828
RICTOR RPTOR independent companion of MTOR, complex 2 -0.0633527
FAM13A family with sequence similarity 13, member A -0.0629935
TMSB10 thymosin beta 10 -0.0627862
SLC38A1 solute carrier family 38, member 1 -0.0617862
EEF2 eukaryotic translation elongation factor 2 -0.0595133
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type -0.0592068
PDE4D phosphodiesterase 4D, cAMP-specific -0.0579449
MT2A metallothionein 2A -0.0578296
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0560995
DLG1 discs, large homolog 1 (Drosophila) -0.0553271
ARID4B AT rich interactive domain 4B (RBP1-like) -0.0540146
GCLC glutamate-cysteine ligase, catalytic subunit -0.0535387
PTK2 protein tyrosine kinase 2 -0.0533356
PRRC2C proline-rich coiled-coil 2C -0.0516219
RPS16 ribosomal protein S16 -0.0509373
SMYD3 SET and MYND domain containing 3 -0.0500317
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) -0.0486349
OGA O-GlcNAcase -0.047664
ITGA6 integrin, alpha 6 -0.0460165
NFIA nuclear factor I/A -0.0457168
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0450277
RORA RAR-related orphan receptor A -0.0449108
FMNL2 formin-like 2 -0.0437377
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.043048
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific) -0.0429591
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0426273
ANKRD11 ankyrin repeat domain 11 -0.0418608
KDM4C lysine (K)-specific demethylase 4C -0.039899
AKAP12 A kinase (PRKA) anchor protein 12 -0.0392713
GNPDA1 glucosamine-6-phosphate deaminase 1 -0.0387333
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0386631
FTL ferritin, light polypeptide -0.0384722
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) -0.0367318
PKM pyruvate kinase, muscle -0.0362075
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0357829
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0355849
ZNF292 zinc finger protein 292 -0.0353183
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.03492
TENM3 teneurin transmembrane protein 3 -0.0345528
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0342736
NAP1L1 nucleosome assembly protein 1-like 1 -0.0333766
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.0325746
PPP6R3 protein phosphatase 6, regulatory subunit 3 -0.0325483
STC1 stanniocalcin 1 -0.0306033
RAB10 RAB10, member RAS oncogene family -0.0287078
LAMB3 laminin, beta 3 -0.0284369
MAML2 mastermind-like 2 (Drosophila) -0.0281131
GLG1 golgi glycoprotein 1 -0.02804
MYOF myoferlin -0.0272904
MDGA2 MAM domain containing glycosylphosphatidylinositol anchor 2 -0.0259811
SBF2 SET binding factor 2 -0.0251761
RPLP1 ribosomal protein, large, P1 -0.0248767
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0245676
GPHN gephyrin -0.0242548
RPL35A ribosomal protein L35a -0.0236048
CAMTA1 calmodulin binding transcription activator 1 -0.0231157
NRG1 neuregulin 1 -0.0224094
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 -0.0206054
ANXA2 annexin A2 -0.0205304
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0201149
ANO6 anoctamin 6 -0.0187211
LMO7 LIM domain 7 -0.018699
TPT1 tumor protein, translationally-controlled 1 -0.0160991
PTPRM protein tyrosine phosphatase, receptor type, M -0.0159242
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0154962
GOLGB1 golgin B1 -0.0150122
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0146203
FTH1 ferritin, heavy polypeptide 1 -0.0144237
AKAP9 A kinase (PRKA) anchor protein 9 -0.0142589
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 -0.0128808
TXNRD1 thioredoxin reductase 1 -0.0127729
MAGI2 membrane associated guanylate kinase, WW and PDZ domain containing 2 -0.0124258
KANSL1 KAT8 regulatory NSL complex subunit 1 -0.0123375
DOCK5 dedicator of cytokinesis 5 -0.0100798
BPTF bromodomain PHD finger transcription factor -0.00952973
RAD51B RAD51 paralog B -0.0094481
WNK1 WNK lysine deficient protein kinase 1 -0.00837894
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.00697649
SNX13 sorting nexin 13 -0.00681947
ARHGAP21 Rho GTPase activating protein 21 -0.00562513
SPAG9 sperm associated antigen 9 -0.00540381
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.00459687
LPP LIM domain containing preferred translocation partner in lipoma -0.0045428
CLTC clathrin, heavy chain (Hc) -0.0043034
EXT1 exostosin glycosyltransferase 1 -0.00266628
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) -0.00162314
PSD3 pleckstrin and Sec7 domain containing 3 -0.00141778
P4HB prolyl 4-hydroxylase, beta polypeptide -0.00115837
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase -7.0036E-4