Altretamine_NCI-H661 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Altretamine perturbation in NCI-H661 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Altretamine_NCI-H661 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.199192
PEG10 paternally expressed 10 0.128647
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.103853
TMSB4X thymosin beta 4, X-linked 0.0908798
TSC22D2 TSC22 domain family, member 2 0.0900612
YES1 YES proto-oncogene 1, Src family tyrosine kinase 0.0841664
ZNF292 zinc finger protein 292 0.0823755
ARHGAP15 Rho GTPase activating protein 15 0.0810008
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0753219
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0637027
POTEF POTE ankyrin domain family, member F 0.0615103
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.059648
THBS1 thrombospondin 1 0.0565855
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats 0.0559658
ZFAND3 zinc finger, AN1-type domain 3 0.0558319
PABPC1 poly(A) binding protein, cytoplasmic 1 0.0538469
CSDE1 cold shock domain containing E1, RNA-binding 0.0524389
USP3 ubiquitin specific peptidase 3 0.0524108
POLR2B polymerase (RNA) II (DNA directed) polypeptide B, 140kDa 0.0511598
PDE4D phosphodiesterase 4D, cAMP-specific 0.0508051
BCLAF1 BCL2-associated transcription factor 1 0.0502096
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 0.0495874
MATR3 matrin 3 0.0492494
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.0488471
WDR43 WD repeat domain 43 0.0463908
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0456649
NCKAP1 NCK-associated protein 1 0.0453309
ADAM9 ADAM metallopeptidase domain 9 0.0452834
ACSL3 acyl-CoA synthetase long-chain family member 3 0.0451666
PDGFC platelet derived growth factor C 0.0451281
CALR calreticulin 0.0449302
KMT2E lysine (K)-specific methyltransferase 2E 0.04446
MCTP1 multiple C2 domains, transmembrane 1 0.0443636
RLF rearranged L-myc fusion 0.0439717
CCT6A chaperonin containing TCP1, subunit 6A (zeta 1) 0.0435146
PUM1 pumilio RNA-binding family member 1 0.0434948
TPM3 tropomyosin 3 0.0430138
GPC3 glypican 3 0.0427508
PLEKHB2 pleckstrin homology domain containing, family B (evectins) member 2 0.0417684
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0415629
COL5A2 collagen, type V, alpha 2 0.040793
PRPF8 pre-mRNA processing factor 8 0.0403982
SEMA3E sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E 0.0401524
FIGN fidgetin 0.0399251
NAMPT nicotinamide phosphoribosyltransferase 0.03985
EWSR1 EWS RNA-binding protein 1 0.039541
TWSG1 twisted gastrulation BMP signaling modulator 1 0.0393628
PPP4R1 protein phosphatase 4, regulatory subunit 1 0.0393277
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.0389265
TXNRD1 thioredoxin reductase 1 0.0388127
CCNL1 cyclin L1 0.038277
EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 0.0382085
EEF1A1 eukaryotic translation elongation factor 1 alpha 1 0.0380876
YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon 0.0377928
RAD23B RAD23 homolog B (S. cerevisiae) 0.0370267
FUBP1 far upstream element (FUSE) binding protein 1 0.0367317
ANXA5 annexin A5 0.0362943
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein 0.0358784
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0358557
RBM39 RNA binding motif protein 39 0.035532
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.0352284
MYH9 myosin, heavy chain 9, non-muscle 0.0351617
SFPQ splicing factor proline/glutamine-rich 0.0349849
CRY1 cryptochrome circadian clock 1 0.0348842
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 0.0348205
FXR1 fragile X mental retardation, autosomal homolog 1 0.0342936
EPB41L2 erythrocyte membrane protein band 4.1-like 2 0.0342794
OSBPL9 oxysterol binding protein-like 9 0.0342792
UBR4 ubiquitin protein ligase E3 component n-recognin 4 0.0337967
CLTC clathrin, heavy chain (Hc) 0.0336461
UBE2D3 ubiquitin-conjugating enzyme E2D 3 0.0336065
EIF3A eukaryotic translation initiation factor 3, subunit A 0.0333451
MEMO1 mediator of cell motility 1 0.0330305
MTF2 metal response element binding transcription factor 2 0.032088
PTP4A2 protein tyrosine phosphatase type IVA, member 2 0.0318553
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0317395
TPR translocated promoter region, nuclear basket protein 0.031607
USP12 ubiquitin specific peptidase 12 0.0310269
KDM1A lysine (K)-specific demethylase 1A 0.030626
ACTR3 ARP3 actin-related protein 3 homolog (yeast) 0.0305353
UPP1 uridine phosphorylase 1 0.0300839
OLA1 Obg-like ATPase 1 0.0300183
SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) 0.0298395
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0297445
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.029734
SF3B1 splicing factor 3b, subunit 1, 155kDa 0.029711
AZIN1 antizyme inhibitor 1 0.0295643
RTN4 reticulon 4 0.0291338
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0291069
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 0.0290604
ELOVL5 ELOVL fatty acid elongase 5 0.028981
CALCR calcitonin receptor 0.02888
SEC63 SEC63 homolog (S. cerevisiae) 0.0288105
NOP58 NOP58 ribonucleoprotein 0.0288092
PROS1 protein S (alpha) 0.0286508
MNAT1 MNAT CDK-activating kinase assembly factor 1 0.0284842
TSR1 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae) 0.0283816
DHX15 DEAH (Asp-Glu-Ala-His) box helicase 15 0.0283512
LHFPL6 LHFPL tetraspan subfamily member 6 0.0283156
RYBP RING1 and YY1 binding protein 0.028255

decreased expression

Symbol Name Standardized Value
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.123143
CTNNA2 catenin (cadherin-associated protein), alpha 2 -0.107799
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.104869
CADM2 cell adhesion molecule 2 -0.0919064
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0841854
COL11A1 collagen, type XI, alpha 1 -0.0813539
CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) -0.0748663
SIPA1L3 signal-induced proliferation-associated 1 like 3 -0.0741785
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) -0.0705887
CTNNA3 catenin (cadherin-associated protein), alpha 3 -0.0637857
ADGRL2 adhesion G protein-coupled receptor L2 -0.0632494
SNX6 sorting nexin 6 -0.0630338
PARD3B par-3 family cell polarity regulator beta -0.0609809
WSB1 WD repeat and SOCS box containing 1 -0.059514
CDH10 cadherin 10, type 2 (T2-cadherin) -0.0573395
MRPS6 mitochondrial ribosomal protein S6 -0.0572541
PCLO piccolo presynaptic cytomatrix protein -0.0569416
RBMS3 RNA binding motif, single stranded interacting protein 3 -0.0566705
TNRC6B trinucleotide repeat containing 6B -0.0559181
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 -0.0558129
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0550665
MDK midkine (neurite growth-promoting factor 2) -0.0542107
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 -0.0523887
ANKRD12 ankyrin repeat domain 12 -0.0516461
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.0504874
ATXN2 ataxin 2 -0.0496759
RPS6 ribosomal protein S6 -0.0485299
TTC28 tetratricopeptide repeat domain 28 -0.0475937
PDIA3 protein disulfide isomerase family A, member 3 -0.0475671
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 -0.0467572
NTM neurotrimin -0.0437531
NEBL nebulette -0.0428498
EIF1 eukaryotic translation initiation factor 1 -0.0426772
RPL35A ribosomal protein L35a -0.0418119
HDAC9 histone deacetylase 9 -0.0413529
RPS8 ribosomal protein S8 -0.0410366
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0409013
CSMD3 CUB and Sushi multiple domains 3 -0.0404271
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0403851
TMSB10 thymosin beta 10 -0.0400904
ZNF217 zinc finger protein 217 -0.0398101
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0396175
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I -0.0395919
LOC102724023 ES1 protein homolog, mitochondrial -0.0393433
RPS16 ribosomal protein S16 -0.0376368
INTS6 integrator complex subunit 6 -0.0376333
IARS1 isoleucyl-tRNA synthetase 1 -0.0375932
COL3A1 collagen, type III, alpha 1 -0.0364937
KDM3A lysine (K)-specific demethylase 3A -0.036408
PLEKHA5 pleckstrin homology domain containing, family A member 5 -0.0355911
NF1 neurofibromin 1 -0.0349439
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0348767
SMYD3 SET and MYND domain containing 3 -0.0348076
PHIP pleckstrin homology domain interacting protein -0.0344541
NR2F1 nuclear receptor subfamily 2, group F, member 1 -0.0343598
CDH4 cadherin 4, type 1, R-cadherin (retinal) -0.0343384
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0341736
TPT1 tumor protein, translationally-controlled 1 -0.0340045
ARHGAP5 Rho GTPase activating protein 5 -0.0328027
NRG1 neuregulin 1 -0.0327633
KCTD16 potassium channel tetramerization domain containing 16 -0.0321524
NHSL1 NHS-like 1 -0.0321493
SRPK2 SRSF protein kinase 2 -0.0318131
SLIT2 slit homolog 2 (Drosophila) -0.0317602
GNAS GNAS complex locus -0.031756
ATP9A ATPase, class II, type 9A -0.0316594
VPS13B vacuolar protein sorting 13 homolog B (yeast) -0.0314669
CDH19 cadherin 19, type 2 -0.0313009
PCDH9 protocadherin 9 -0.0313008
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0312481
RPL37 ribosomal protein L37 -0.0309221
PCDH7 protocadherin 7 -0.0307998
FAM177A1 family with sequence similarity 177, member A1 -0.0306578
NXN nucleoredoxin -0.0306052
TUT4 terminal uridylyl transferase 4 -0.0305333
CUX1 cut-like homeobox 1 -0.0305112
UBC ubiquitin C -0.0303763
RCOR1 REST corepressor 1 -0.0302955
LPIN2 lipin 2 -0.0300246
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 -0.0297948
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0290718
TTC3 tetratricopeptide repeat domain 3 -0.0289083
TUBA1B tubulin, alpha 1b -0.0288025
CSNK1A1 casein kinase 1, alpha 1 -0.0288024
TAS2R14 taste receptor, type 2, member 14 -0.0287338
RSL1D1 ribosomal L1 domain containing 1 -0.0284859
ROBO1 roundabout, axon guidance receptor, homolog 1 (Drosophila) -0.0284423
USH2A Usher syndrome 2A (autosomal recessive, mild) -0.0283254
DLG1 discs, large homolog 1 (Drosophila) -0.0281436
BRWD1 bromodomain and WD repeat domain containing 1 -0.0280484
HMGA2 high mobility group AT-hook 2 -0.0278612
CEP350 centrosomal protein 350kDa -0.0276941
ACAP2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 -0.0270294
TNS3 tensin 3 -0.0268538
KDM2A lysine (K)-specific demethylase 2A -0.0263598
RAB31 RAB31, member RAS oncogene family -0.0263168
RPL9 ribosomal protein L9 -0.0261511
CDK13 cyclin-dependent kinase 13 -0.0261034
SSH2 slingshot protein phosphatase 2 -0.0260921
SREBF2 sterol regulatory element binding transcription factor 2 -0.0257754