Altretamine_SW 1271 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Altretamine perturbation in SW 1271 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Altretamine_SW 1271 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
RBM39 RNA binding motif protein 39 0.0745782
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) 0.068529
TOP2A topoisomerase (DNA) II alpha 170kDa 0.0669539
NAMPT nicotinamide phosphoribosyltransferase 0.0656435
ZNF292 zinc finger protein 292 0.063709
PABPC1 poly(A) binding protein, cytoplasmic 1 0.061409
CHD1 chromodomain helicase DNA binding protein 1 0.0599576
ECT2 epithelial cell transforming 2 0.0586377
ANKRD28 ankyrin repeat domain 28 0.0555888
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) 0.0537717
NUP58 nucleoporin 58 0.0526992
ANLN anillin, actin binding protein 0.0500699
SREK1 splicing regulatory glutamine/lysine-rich protein 1 0.0487498
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa 0.0476573
BIRC3 baculoviral IAP repeat containing 3 0.0472124
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0470427
CENPF centromere protein F, 350/400kDa 0.0460239
SPAG9 sperm associated antigen 9 0.0454432
MATR3 matrin 3 0.0454014
YAP1 Yes-associated protein 1 0.0449833
WAC WW domain containing adaptor with coiled-coil 0.0446778
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.0426143
TRIO trio Rho guanine nucleotide exchange factor 0.0422412
NAV2 neuron navigator 2 0.0408555
EEF2 eukaryotic translation elongation factor 2 0.0407981
TPX2 TPX2, microtubule-associated 0.0407147
NCAPD2 non-SMC condensin I complex, subunit D2 0.0405975
CKAP5 cytoskeleton associated protein 5 0.040555
PUM2 pumilio RNA-binding family member 2 0.0398589
MIS18BP1 MIS18 binding protein 1 0.0395114
CD44 CD44 molecule (Indian blood group) 0.0391507
ATP13A3 ATPase type 13A3 0.0383254
RSRC2 arginine/serine-rich coiled-coil 2 0.0382942
TENT2 terminal nucleotidyltransferase 2 0.0376081
CCNL1 cyclin L1 0.0375042
UBAC2 UBA domain containing 2 0.0373371
ELL2 elongation factor, RNA polymerase II, 2 0.0370241
XPO1 exportin 1 0.0365116
KIF5B kinesin family member 5B 0.0362364
SGO2 shugoshin 2 0.0345433
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0342067
NGLY1 N-glycanase 1 0.034058
RBM25 RNA binding motif protein 25 0.0336981
AHCTF1 AT hook containing transcription factor 1 0.0331556
SEPTIN7 septin 7 0.0321321
PHIP pleckstrin homology domain interacting protein 0.0315527
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.0312502
DHDDS dehydrodolichyl diphosphate synthase 0.0311702
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0310402
TXNRD1 thioredoxin reductase 1 0.0307654
KIF4A kinesin family member 4A 0.0306425
PDS5B PDS5 cohesin associated factor B 0.0303298
NBAS neuroblastoma amplified sequence 0.0302474
RNF145 ring finger protein 145 0.0302189
CXCL8 chemokine (C-X-C motif) ligand 8 0.030177
YBX3 Y box binding protein 3 0.0298869
ZFAND6 zinc finger, AN1-type domain 6 0.0296815
SET SET nuclear proto-oncogene 0.0295743
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.0294116
PDE8A phosphodiesterase 8A 0.0292811
CDK5RAP2 CDK5 regulatory subunit associated protein 2 0.0291356
SETD5 SET domain containing 5 0.0289862
RABGAP1 RAB GTPase activating protein 1 0.0288417
ABL1 ABL proto-oncogene 1, non-receptor tyrosine kinase 0.0287795
MKI67 marker of proliferation Ki-67 0.0286986
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0285798
NCOR1 nuclear receptor corepressor 1 0.0285662
FAM13A family with sequence similarity 13, member A 0.0284298
GOLGA4 golgin A4 0.0283071
CLTC clathrin, heavy chain (Hc) 0.0281069
TBC1D5 TBC1 domain family, member 5 0.028051
KTN1 kinectin 1 (kinesin receptor) 0.028025
WDR45B WD repeat domain 45B 0.0278955
BUB1 BUB1 mitotic checkpoint serine/threonine kinase 0.0278755
ANKRD36C ankyrin repeat domain 36C 0.027751
PRKDC protein kinase, DNA-activated, catalytic polypeptide 0.0276607
RAB6A RAB6A, member RAS oncogene family 0.0274488
SMC4 structural maintenance of chromosomes 4 0.0274441
CDK17 cyclin-dependent kinase 17 0.0273813
KIAA1958 KIAA1958 0.0272816
DERA deoxyribose-phosphate aldolase (putative) 0.027244
MYH9 myosin, heavy chain 9, non-muscle 0.0271354
TOP2B topoisomerase (DNA) II beta 180kDa 0.0271125
CEP295 centrosomal protein 295kDa 0.0270987
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0270486
REV3L REV3-like, polymerase (DNA directed), zeta, catalytic subunit 0.0269762
LCORL ligand dependent nuclear receptor corepressor-like 0.0268805
HILPDA hypoxia inducible lipid droplet-associated 0.0268755
RBM26 RNA binding motif protein 26 0.0268754
WDR43 WD repeat domain 43 0.0265918
ECPAS Ecm29 proteasome adaptor and scaffold 0.0265552
ITCH itchy E3 ubiquitin protein ligase 0.0265296
HJURP Holliday junction recognition protein 0.0263501
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0263058
HBS1L HBS1-like translational GTPase 0.0262145
TMEM245 transmembrane protein 245 0.0261762
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) 0.0260765
OGA O-GlcNAcase 0.0260551
AKAP9 A kinase (PRKA) anchor protein 9 0.0257004
ATP11B ATPase, class VI, type 11B 0.0256587

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.161725
HMGA2 high mobility group AT-hook 2 -0.102428
TPT1 tumor protein, translationally-controlled 1 -0.0922951
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0875163
INTS6 integrator complex subunit 6 -0.0790243
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0680892
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 -0.0616037
ZBTB20 zinc finger and BTB domain containing 20 -0.0585796
PRKCA protein kinase C, alpha -0.0582962
AHNAK AHNAK nucleoprotein -0.0544519
FNDC3B fibronectin type III domain containing 3B -0.0542888
TMSB10 thymosin beta 10 -0.0503941
N4BP2L2 NEDD4 binding protein 2-like 2 -0.0503643
IGFBP3 insulin-like growth factor binding protein 3 -0.0496127
ANGPTL4 angiopoietin-like 4 -0.0448609
ATM ATM serine/threonine kinase -0.0442783
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0437806
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0417733
PRR16 proline rich 16 -0.0410155
PCED1B PC-esterase domain containing 1B -0.0397541
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0384979
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0379218
RAI14 retinoic acid induced 14 -0.0358786
DST dystonin -0.0352841
PMEPA1 prostate transmembrane protein, androgen induced 1 -0.0350318
BICD1 bicaudal D homolog 1 (Drosophila) -0.0349953
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like -0.0342911
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0334786
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 -0.0332688
AEBP2 AE binding protein 2 -0.0323953
IL1RAP interleukin 1 receptor accessory protein -0.0317819
PURA purine-rich element binding protein A -0.0313069
SLC38A2 solute carrier family 38, member 2 -0.0311266
ATXN1 ataxin 1 -0.0305126
DPYD dihydropyrimidine dehydrogenase -0.0303802
RPLP1 ribosomal protein, large, P1 -0.0298437
CDH4 cadherin 4, type 1, R-cadherin (retinal) -0.0296755
MBD5 methyl-CpG binding domain protein 5 -0.0296261
MACF1 microtubule-actin crosslinking factor 1 -0.0289228
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2 -0.0285842
SH3KBP1 SH3-domain kinase binding protein 1 -0.0282059
PODXL podocalyxin-like -0.0281182
FMN1 formin 1 -0.0280636
SVIL supervillin -0.0277349
ATG7 autophagy related 7 -0.0273635
RNF213 ring finger protein 213 -0.0273386
PLEK2 pleckstrin 2 -0.0273288
STXBP5 syntaxin binding protein 5 (tomosyn) -0.0273216
NDRG1 N-myc downstream regulated 1 -0.0271546
DLGAP4 discs, large (Drosophila) homolog-associated protein 4 -0.0269462
EGR1 early growth response 1 -0.0268671
FMNL2 formin-like 2 -0.0265674
TRPC1 transient receptor potential cation channel, subfamily C, member 1 -0.0262453
CEMIP2 cell migration inducing hyaluronidase 2 -0.026211
KLF3 Kruppel-like factor 3 (basic) -0.0261627
PCNX4 pecanex 4 -0.0260317
GNAS GNAS complex locus -0.0257617
BMPR2 bone morphogenetic protein receptor, type II (serine/threonine kinase) -0.0256723
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0255624
ELOF1 elongation factor 1 homolog (S. cerevisiae) -0.0254853
IGF2 insulin-like growth factor 2 -0.025205
COL5A1 collagen, type V, alpha 1 -0.025125
DOCK5 dedicator of cytokinesis 5 -0.024909
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0249087
RPL35A ribosomal protein L35a -0.0248149
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0246343
EGFR epidermal growth factor receptor -0.0245311
ABR active BCR-related -0.0244973
SIK2 salt-inducible kinase 2 -0.0244672
EXT1 exostosin glycosyltransferase 1 -0.0242056
TVP23C-CDRT4 TVP23C-CDRT4 readthrough -0.023949
MAP1B microtubule-associated protein 1B -0.023904
MBNL2 muscleblind-like splicing regulator 2 -0.0238731
ASPH aspartate beta-hydroxylase -0.0233744
SASH1 SAM and SH3 domain containing 1 -0.0233056
PALM2AKAP2 PALM2 and AKAP2 fusion -0.0232966
EFNA5 ephrin-A5 -0.0231753
TPI1 triosephosphate isomerase 1 -0.0230773
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1 -0.0230551
RPL15 ribosomal protein L15 -0.0227987
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0227828
FSCN1 fascin actin-bundling protein 1 -0.022774
LOC112694756 uncharaterized LOC112694756 -0.0227483
NLK nemo-like kinase -0.0227338
FAM177A1 family with sequence similarity 177, member A1 -0.0227261
THBS1 thrombospondin 1 -0.0226425
TUT7 terminal uridylyl transferase 7 -0.022424
WNT2B wingless-type MMTV integration site family, member 2B -0.0224191
RPL30 ribosomal protein L30 -0.021916
SETX senataxin -0.0218335
UGGT2 UDP-glucose glycoprotein glucosyltransferase 2 -0.0218209
CLIP1 CAP-GLY domain containing linker protein 1 -0.0217053
FLNB filamin B, beta -0.0215741
FER fer (fps/fes related) tyrosine kinase -0.0214184
RPS17 ribosomal protein S17 -0.021295
HLA-C major histocompatibility complex, class I, C -0.0212294
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) -0.0212275
SMIM14 small integral membrane protein 14 -0.0210956
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0209033
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0208847