Amsacrine_A-172 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Amsacrine perturbation in A-172 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Amsacrine_A-172 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
IGFBP3 insulin-like growth factor binding protein 3 0.23271
AKAP12 A kinase (PRKA) anchor protein 12 0.15278
TRIO trio Rho guanine nucleotide exchange factor 0.151463
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.141608
COL5A1 collagen, type V, alpha 1 0.138414
CDH13 cadherin 13 0.0984055
AHNAK AHNAK nucleoprotein 0.097596
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0968496
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0928764
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.0863675
FTH1 ferritin, heavy polypeptide 1 0.0822755
PLAT plasminogen activator, tissue 0.0772182
CALR calreticulin 0.0705564
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.0663552
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0659017
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0648404
ADAMTS6 ADAM metallopeptidase with thrombospondin type 1 motif, 6 0.0617883
EEF2 eukaryotic translation elongation factor 2 0.0605962
CANX calnexin 0.0584442
FN1 fibronectin 1 0.0583298
PLEC plectin 0.0581543
SLC39A11 solute carrier family 39, member 11 0.0556115
RUNX1 runt-related transcription factor 1 0.0555467
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0544687
MACF1 microtubule-actin crosslinking factor 1 0.053046
ANKRD11 ankyrin repeat domain 11 0.0529963
PDIA3 protein disulfide isomerase family A, member 3 0.0527593
MYH9 myosin, heavy chain 9, non-muscle 0.0485804
GOLGA4 golgin A4 0.0483297
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0477345
COPA coatomer protein complex, subunit alpha 0.0474075
SEPTIN9 septin 9 0.0465632
EGFR epidermal growth factor receptor 0.0462601
CCND1 cyclin D1 0.0452799
LOX lysyl oxidase 0.0434706
BHLHE40 basic helix-loop-helix family, member e40 0.0419694
COL8A1 collagen, type VIII, alpha 1 0.0404622
PRKAG2 protein kinase, AMP-activated, gamma 2 non-catalytic subunit 0.0404135
MSI2 musashi RNA-binding protein 2 0.0392848
LAMC1 laminin, gamma 1 (formerly LAMB2) 0.0375463
AHNAK2 AHNAK nucleoprotein 2 0.0361774
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) 0.0360446
PALM2AKAP2 PALM2 and AKAP2 fusion 0.0359091
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0355517
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.0351356
SIPA1L3 signal-induced proliferation-associated 1 like 3 0.0348432
TNIP1 TNFAIP3 interacting protein 1 0.0346699
MAP1B microtubule-associated protein 1B 0.0332784
PLXNA2 plexin A2 0.0326619
COL5A2 collagen, type V, alpha 2 0.0323365
IGFN1 immunoglobulin-like and fibronectin type III domain containing 1 0.0320051
CD109 CD109 molecule 0.0319273
XPC xeroderma pigmentosum, complementation group C 0.031756
AKT3 v-akt murine thymoma viral oncogene homolog 3 0.0315692
GDF15 growth differentiation factor 15 0.0315079
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0311466
TPM3 tropomyosin 3 0.0310731
SLFN5 schlafen family member 5 0.0299889
IL7R interleukin 7 receptor 0.0293059
ABI3BP ABI family, member 3 (NESH) binding protein 0.02921
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0287891
HDAC9 histone deacetylase 9 0.0286357
CEP170 centrosomal protein 170kDa 0.0278638
DSPP dentin sialophosphoprotein 0.0278525
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila) 0.0275529
DST dystonin 0.0275196
PDIA6 protein disulfide isomerase family A, member 6 0.0274706
BCL2L1 BCL2-like 1 0.0269359
VEGFC vascular endothelial growth factor C 0.0268877
SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) 0.0267471
RND3 Rho family GTPase 3 0.0262243
FMN2 formin 2 0.0261576
FLNA filamin A, alpha 0.0259031
S100A6 S100 calcium binding protein A6 0.0258948
KRT18 keratin 18, type I 0.0257808
MSANTD3 Myb/SANT-like DNA-binding domain containing 3 0.0257331
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0256796
MSN moesin 0.025367
AFF4 AF4/FMR2 family, member 4 0.0253621
HYOU1 hypoxia up-regulated 1 0.0249716
HELZ helicase with zinc finger 0.0249095
RAB1A RAB1A, member RAS oncogene family 0.0248341
FXR1 fragile X mental retardation, autosomal homolog 1 0.0246147
NCOR2 nuclear receptor corepressor 2 0.0244798
DGKG diacylglycerol kinase, gamma 90kDa 0.0244494
NSD1 nuclear receptor binding SET domain protein 1 0.024417
SPDL1 spindle apparatus coiled-coil protein 1 0.0243824
PLEKHA2 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 2 0.0243803
ADAM9 ADAM metallopeptidase domain 9 0.0241279
APP amyloid beta (A4) precursor protein 0.0241053
TPM1 tropomyosin 1 (alpha) 0.0240864
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 0.0239843
UBXN4 UBX domain protein 4 0.0238388
RPS6KA2 ribosomal protein S6 kinase, 90kDa, polypeptide 2 0.0237244
GADD45A growth arrest and DNA-damage-inducible, alpha 0.02371
ZFP36L1 ZFP36 ring finger protein-like 1 0.0236648
DENND1A DENN/MADD domain containing 1A 0.0236143
TPM4 tropomyosin 4 0.0236129
ZMIZ1 zinc finger, MIZ-type containing 1 0.0235303
DCLK2 doublecortin-like kinase 2 0.0235221

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.188113
MT2A metallothionein 2A -0.156482
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0930609
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0854072
CALM1 calmodulin 1 (phosphorylase kinase, delta) -0.0508179
CD44 CD44 molecule (Indian blood group) -0.0446877
MARCKS myristoylated alanine-rich protein kinase C substrate -0.0446424
VIM vimentin -0.0443031
COL1A2 collagen, type I, alpha 2 -0.0436048
TPT1 tumor protein, translationally-controlled 1 -0.0435673
FBN1 fibrillin 1 -0.0418383
PTMA prothymosin, alpha -0.0395102
VCL vinculin -0.0380361
MT1X metallothionein 1X -0.0378471
IFIH1 interferon induced with helicase C domain 1 -0.0349818
NDRG1 N-myc downstream regulated 1 -0.0343003
HLA-B major histocompatibility complex, class I, B -0.0341262
STC1 stanniocalcin 1 -0.0336472
GPC6 glypican 6 -0.0335661
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0333183
MYADM myeloid-associated differentiation marker -0.0316643
PSD3 pleckstrin and Sec7 domain containing 3 -0.0311159
SPARC secreted protein, acidic, cysteine-rich (osteonectin) -0.0308991
IRF2BP2 interferon regulatory factor 2 binding protein 2 -0.02777
ARL4C ADP-ribosylation factor-like 4C -0.0274794
S100A4 S100 calcium binding protein A4 -0.0272943
PRELID2 PRELI domain containing 2 -0.0270785
DPYSL3 dihydropyrimidinase-like 3 -0.0254447
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0238226
RHOBTB3 Rho-related BTB domain containing 3 -0.0233647
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0229178
IFITM1 interferon induced transmembrane protein 1 -0.0224393
RBM25 RNA binding motif protein 25 -0.0220195
ACTG1 actin gamma 1 -0.0220104
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0218142
SMC4 structural maintenance of chromosomes 4 -0.0216826
POLR2A polymerase (RNA) II (DNA directed) polypeptide A, 220kDa -0.0213244
MYL12B myosin, light chain 12B, regulatory -0.02077
CENPF centromere protein F, 350/400kDa -0.0206385
RPL32 ribosomal protein L32 -0.0205575
RPL35A ribosomal protein L35a -0.0202452
ID1 inhibitor of DNA binding 1, dominant negative helix-loop-helix protein -0.0201795
COL3A1 collagen, type III, alpha 1 -0.0200008
DLG1 discs, large homolog 1 (Drosophila) -0.0199934
VDAC1 voltage-dependent anion channel 1 -0.0199872
CD81 CD81 molecule -0.0195199
CSTB cystatin B (stefin B) -0.0192869
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0191086
FBXL7 F-box and leucine-rich repeat protein 7 -0.0187297
ARHGAP5 Rho GTPase activating protein 5 -0.0179779
IFITM3 interferon induced transmembrane protein 3 -0.0174616
TMEM158 transmembrane protein 158 (gene/pseudogene) -0.0174529
TXNIP thioredoxin interacting protein -0.0171764
SDC4 syndecan 4 -0.0171519
CAVIN1 caveolae associated protein 1 -0.0165391
EGR1 early growth response 1 -0.0163894
IFI6 interferon, alpha-inducible protein 6 -0.0163501
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0163317
MPZL1 myelin protein zero-like 1 -0.0162445
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0160798
SH3BP2 SH3-domain binding protein 2 -0.0160093
PRSS23 protease, serine, 23 -0.0159178
ACTN4 actinin, alpha 4 -0.0157553
RPL23 ribosomal protein L23 -0.0156922
NPR2 natriuretic peptide receptor 2 -0.0154077
GNAI2 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 2 -0.0153167
TUBB tubulin, beta class I -0.0151319
RPL9 ribosomal protein L9 -0.0150261
MRC2 mannose receptor, C type 2 -0.014862
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide -0.0148361
TMOD1 tropomodulin 1 -0.0147872
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0145062
EIF1 eukaryotic translation initiation factor 1 -0.0144648
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.0141794
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0139889
TUBA1B tubulin, alpha 1b -0.0139028
PLAUR plasminogen activator, urokinase receptor -0.0137078
SH3BP5 SH3-domain binding protein 5 (BTK-associated) -0.0136961
TMEM263 transmembrane protein 263 -0.0136949
RASA2 RAS p21 protein activator 2 -0.0135975
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0133878
PPP2R3A protein phosphatase 2, regulatory subunit B'', alpha -0.0133088
DEK DEK proto-oncogene -0.0129479
B2M beta-2-microglobulin -0.0127887
TBC1D8 TBC1 domain family, member 8 (with GRAM domain) -0.0126919
UMAD1 UBAP1-MVB12-associated (UMA) domain containing 1 -0.0126246
FTL ferritin, light polypeptide -0.0125799
XPO7 exportin 7 -0.0124865
SBF2 SET binding factor 2 -0.0124783
GNGT1 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 -0.0124714
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0123103
SERF2 small EDRK-rich factor 2 -0.0123102
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 -0.0122808
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0122488
ARPC1B actin related protein 2/3 complex, subunit 1B, 41kDa -0.0121506
FUS FUS RNA binding protein -0.0121489
CCNI cyclin I -0.0119264
ATP5F1E ATP synthase F1 subunit epsilon -0.0118743
MIDN midnolin -0.0118379
SMIM3 small integral membrane protein 3 -0.011708