Amsacrine_A-427 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Amsacrine perturbation in A-427 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Amsacrine_A-427 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
SCD stearoyl-CoA desaturase (delta-9-desaturase) 0.182396
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.150893
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.100639
YAP1 Yes-associated protein 1 0.0723074
HMGA2 high mobility group AT-hook 2 0.0718541
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0690053
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0596894
FTL ferritin, light polypeptide 0.0577857
MBD5 methyl-CpG binding domain protein 5 0.0564625
INTS6 integrator complex subunit 6 0.0560697
ERC1 ELKS/RAB6-interacting/CAST family member 1 0.0556035
EEF2 eukaryotic translation elongation factor 2 0.0533125
ZNF638 zinc finger protein 638 0.0529926
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0510696
ZSWIM6 zinc finger, SWIM-type containing 6 0.0509286
TMSB10 thymosin beta 10 0.0486631
WWOX WW domain containing oxidoreductase 0.0484032
RRM2 ribonucleotide reductase M2 0.0471312
ASPH aspartate beta-hydroxylase 0.0453178
PRELID2 PRELI domain containing 2 0.0452492
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa 0.0430902
TAS2R14 taste receptor, type 2, member 14 0.0415426
MYO1D myosin ID 0.041484
EIF4A2 eukaryotic translation initiation factor 4A2 0.0412093
KDM2A lysine (K)-specific demethylase 2A 0.04071
NHSL1 NHS-like 1 0.0406725
BABAM2 BRISC and BRCA1 A complex member 2 0.0388499
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0386091
RNF213 ring finger protein 213 0.0380712
RPL35A ribosomal protein L35a 0.0380524
SPATS2 spermatogenesis associated, serine-rich 2 0.0376882
TBC1D5 TBC1 domain family, member 5 0.0376131
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.0374926
MACF1 microtubule-actin crosslinking factor 1 0.037331
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.037157
LRRC23 leucine rich repeat containing 23 0.0369975
PRKCE protein kinase C, epsilon 0.0368305
DENND5A DENN/MADD domain containing 5A 0.0365426
KDM4C lysine (K)-specific demethylase 4C 0.036277
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0360895
PHF21A PHD finger protein 21A 0.0360564
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0360245
EXOC4 exocyst complex component 4 0.0359246
LRMDA leucine rich melanocyte differentiation associated 0.035598
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0355922
H1-0 H1.0 linker histone 0.0355354
CUBN cubilin (intrinsic factor-cobalamin receptor) 0.0353668
AHNAK AHNAK nucleoprotein 0.0353053
LPP LIM domain containing preferred translocation partner in lipoma 0.0348198
HSPA9 heat shock 70kDa protein 9 (mortalin) 0.0340195
ARL15 ADP-ribosylation factor-like 15 0.0339729
SMYD3 SET and MYND domain containing 3 0.0336941
R3HDM2 R3H domain containing 2 0.0333706
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0332665
TPM3 tropomyosin 3 0.0321018
LOC112694756 uncharaterized LOC112694756 0.0320217
WNK1 WNK lysine deficient protein kinase 1 0.0317414
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0316062
HSPH1 heat shock 105kDa/110kDa protein 1 0.0312018
FAM168A family with sequence similarity 168, member A 0.0308292
PCDH7 protocadherin 7 0.0306518
CPOX coproporphyrinogen oxidase 0.0304281
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 0.0303368
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0299855
NEBL nebulette 0.0298884
SERTAD2 SERTA domain containing 2 0.0295825
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B 0.0290212
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0289841
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.028973
SFTPA2 surfactant protein A2 0.0288753
NUFIP2 nuclear fragile X mental retardation protein interacting protein 2 0.0287759
TNRC18 trinucleotide repeat containing 18 0.0287264
STIP1 stress-induced phosphoprotein 1 0.0285034
MAML3 mastermind-like 3 (Drosophila) 0.0281198
MGAT4C MGAT4 family, member C 0.0281091
RPLP1 ribosomal protein, large, P1 0.0279169
RPL23 ribosomal protein L23 0.0277134
ZNF292 zinc finger protein 292 0.0276425
FLNA filamin A, alpha 0.027578
RPS29 ribosomal protein S29 0.0275459
TNRC6B trinucleotide repeat containing 6B 0.0274893
HELZ helicase with zinc finger 0.0271544
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0270242
KMT2E lysine (K)-specific methyltransferase 2E 0.0263284
YEATS2 YEATS domain containing 2 0.0262511
ENO1 enolase 1, (alpha) 0.0260942
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.026075
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0258392
PKM pyruvate kinase, muscle 0.0258227
BRD2 bromodomain containing 2 0.025762
MTCL1 microtubule crosslinking factor 1 0.0253928
ATRX alpha thalassemia/mental retardation syndrome X-linked 0.0252351
FBXO11 F-box protein 11 0.0251293
ANK2 ankyrin 2, neuronal 0.02505
KTN1 kinectin 1 (kinesin receptor) 0.024805
JMJD1C jumonji domain containing 1C 0.0246656
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0244647
RPLP2 ribosomal protein, large, P2 0.0244487
CAMKMT calmodulin-lysine N-methyltransferase 0.024243
TPI1 triosephosphate isomerase 1 0.0240945

decreased expression

Symbol Name Standardized Value
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.252634
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.129348
SLC38A2 solute carrier family 38, member 2 -0.106634
CELF2 CUGBP, Elav-like family member 2 -0.0918317
STARD4 StAR-related lipid transfer (START) domain containing 4 -0.0824567
ZNF804A zinc finger protein 804A -0.0607015
MMP12 matrix metallopeptidase 12 -0.0603381
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase -0.0564358
TMEM41B transmembrane protein 41B -0.0558811
BIRC3 baculoviral IAP repeat containing 3 -0.0533807
YBX3 Y box binding protein 3 -0.0532677
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0525607
EDARADD EDAR-associated death domain -0.0517167
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0503827
ERBB4 erb-b2 receptor tyrosine kinase 4 -0.0459462
NCEH1 neutral cholesterol ester hydrolase 1 -0.0454953
ECT2 epithelial cell transforming 2 -0.0449869
LMO7 LIM domain 7 -0.0442898
ADGRG6 adhesion G protein-coupled receptor G6 -0.0439844
NEK7 NIMA-related kinase 7 -0.0410992
DLC1 DLC1 Rho GTPase activating protein -0.0410126
RASAL2 RAS protein activator like 2 -0.0397395
CDK17 cyclin-dependent kinase 17 -0.0387287
PDE4D phosphodiesterase 4D, cAMP-specific -0.037508
DPYD dihydropyrimidine dehydrogenase -0.0371765
WDR43 WD repeat domain 43 -0.0369014
BIRC2 baculoviral IAP repeat containing 2 -0.0363907
CARD16 caspase recruitment domain family, member 16 -0.0349391
ATP5F1B ATP synthase F1 subunit beta -0.0346746
EGLN1 egl-9 family hypoxia-inducible factor 1 -0.0339067
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.0335787
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.0332458
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0327202
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0325042
PLK2 polo-like kinase 2 -0.0323765
NLGN1 neuroligin 1 -0.0323632
LOC102724023 ES1 protein homolog, mitochondrial -0.0317293
OXR1 oxidation resistance 1 -0.0313806
ARL5B ADP-ribosylation factor-like 5B -0.0310793
CXADR coxsackie virus and adenovirus receptor -0.0306439
TMEM131 transmembrane protein 131 -0.0302905
TM4SF1 transmembrane 4 L six family member 1 -0.0297755
RTN4 reticulon 4 -0.0292682
PUM2 pumilio RNA-binding family member 2 -0.0290293
CLDN1 claudin 1 -0.0288989
NAP1L1 nucleosome assembly protein 1-like 1 -0.0288371
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor) -0.0288332
MYL12B myosin, light chain 12B, regulatory -0.0287335
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0280826
PDGFC platelet derived growth factor C -0.0273918
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0262314
KLF6 Kruppel-like factor 6 -0.0260397
SYT1 synaptotagmin I -0.0253896
CHD1 chromodomain helicase DNA binding protein 1 -0.0252871
SMC4 structural maintenance of chromosomes 4 -0.0251109
CENPF centromere protein F, 350/400kDa -0.0249456
ANKRD28 ankyrin repeat domain 28 -0.0249127
CALM2 calmodulin 2 (phosphorylase kinase, delta) -0.0247909
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0246376
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 -0.0244083
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b -0.0242651
YBX1 Y box binding protein 1 -0.0240133
CDK6 cyclin-dependent kinase 6 -0.0240073
DIAPH3 diaphanous-related formin 3 -0.0236508
GASK1B golgi associated kinase 1B -0.0235791
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha -0.023564
RAD21 RAD21 homolog (S. pombe) -0.0234889
DDB2 damage-specific DNA binding protein 2, 48kDa -0.0231675
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0229434
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0227515
AK1 adenylate kinase 1 -0.0226426
ITGBL1 integrin, beta-like 1 (with EGF-like repeat domains) -0.0223162
AP3S1 adaptor-related protein complex 3, sigma 1 subunit -0.0221846
CENPE centromere protein E, 312kDa -0.0221233
RPLP0 ribosomal protein, large, P0 -0.0221219
CALD1 caldesmon 1 -0.0219785
CCNL1 cyclin L1 -0.021727
LRPPRC leucine-rich pentatricopeptide repeat containing -0.0215422
THOC2 THO complex 2 -0.0214852
PRKDC protein kinase, DNA-activated, catalytic polypeptide -0.0208946
GNAI1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1 -0.0208268
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0208264
GARS1 glycyl-tRNA synthetase 1 -0.0205269
PSME4 proteasome (prosome, macropain) activator subunit 4 -0.020516
CCNG1 cyclin G1 -0.0197517
ZNF217 zinc finger protein 217 -0.0195577
PTBP3 polypyrimidine tract binding protein 3 -0.019519
CSNK1A1 casein kinase 1, alpha 1 -0.0195175
TUBA1B tubulin, alpha 1b -0.0194156
SLC38A1 solute carrier family 38, member 1 -0.0193381
ZFP91 ZFP91 zinc finger protein -0.0191414
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 -0.0190916
CSE1L CSE1 chromosome segregation 1-like (yeast) -0.0185919
CCT8 chaperonin containing TCP1, subunit 8 (theta) -0.0184759
BRAF B-Raf proto-oncogene, serine/threonine kinase -0.0184573
CMSS1 cms1 ribosomal small subunit homolog (yeast) -0.0183701
RAB1A RAB1A, member RAS oncogene family -0.0179619
BRWD1 bromodomain and WD repeat domain containing 1 -0.0178514
NDC80 NDC80 kinetochore complex component -0.0177593
GJA1 gap junction protein, alpha 1, 43kDa -0.0177355