Amsacrine_COLO 205 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Amsacrine perturbation in COLO 205 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Amsacrine_COLO 205 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
LCN2 lipocalin 2 0.203367
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.109564
INTS6 integrator complex subunit 6 0.0995418
LYZ lysozyme 0.0875503
FTH1 ferritin, heavy polypeptide 1 0.0802442
DNAJC15 DnaJ (Hsp40) homolog, subfamily C, member 15 0.0797418
PKM pyruvate kinase, muscle 0.0683033
PLSCR2 phospholipid scramblase 2 0.061939
CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 0.0569655
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0551381
GCLC glutamate-cysteine ligase, catalytic subunit 0.0547961
STS steroid sulfatase (microsomal), isozyme S 0.0541011
FAT1 FAT atypical cadherin 1 0.0529676
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0527674
ITGA6 integrin, alpha 6 0.0522242
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0497072
ARHGAP26 Rho GTPase activating protein 26 0.048378
B2M beta-2-microglobulin 0.0459492
TSC22D1 TSC22 domain family, member 1 0.0455014
SEPTIN9 septin 9 0.0450327
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11 0.0449374
N4BP2L2 NEDD4 binding protein 2-like 2 0.0445916
GAPDH glyceraldehyde-3-phosphate dehydrogenase 0.0441739
MYH9 myosin, heavy chain 9, non-muscle 0.0430073
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0423803
PRKCA protein kinase C, alpha 0.0419192
HCN1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 0.0417746
TMC5 transmembrane channel-like 5 0.0404565
RUNX1 runt-related transcription factor 1 0.0400654
LOC112694756 uncharaterized LOC112694756 0.0391652
VEGFA vascular endothelial growth factor A 0.0376533
EPHB2 EPH receptor B2 0.0373493
ANXA2 annexin A2 0.037021
AFF1 AF4/FMR2 family, member 1 0.0363962
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0354022
RNF43 ring finger protein 43 0.0348573
TRERF1 transcriptional regulating factor 1 0.0339122
ABHD2 abhydrolase domain containing 2 0.0336864
EZR ezrin 0.033228
ANXA4 annexin A4 0.0327435
MSI2 musashi RNA-binding protein 2 0.0326789
ZSWIM6 zinc finger, SWIM-type containing 6 0.0325462
SIPA1L2 signal-induced proliferation-associated 1 like 2 0.0322389
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0321676
FNDC3B fibronectin type III domain containing 3B 0.0318197
ENO1 enolase 1, (alpha) 0.0315036
ABCC3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 0.03106
TSHZ2 teashirt zinc finger homeobox 2 0.0310026
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0297881
TXNIP thioredoxin interacting protein 0.0297144
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0291498
TRIO trio Rho guanine nucleotide exchange factor 0.0290845
APLP2 amyloid beta (A4) precursor-like protein 2 0.0290813
MCL1 myeloid cell leukemia 1 0.0289034
IFI27 interferon, alpha-inducible protein 27 0.028697
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0279158
DSCAML1 Down syndrome cell adhesion molecule like 1 0.027039
IL20RA interleukin 20 receptor, alpha 0.026733
HLA-A major histocompatibility complex, class I, A 0.0265719
SRRM2 serine/arginine repetitive matrix 2 0.0265668
PDZD8 PDZ domain containing 8 0.0263994
TTC39B tetratricopeptide repeat domain 39B 0.0263075
ASH1L ash1 (absent, small, or homeotic)-like (Drosophila) 0.0262625
EGR1 early growth response 1 0.0253543
TMEM45B transmembrane protein 45B 0.0250724
PLA2G2A phospholipase A2, group IIA (platelets, synovial fluid) 0.0241913
KDM4C lysine (K)-specific demethylase 4C 0.0241615
ERRFI1 ERBB receptor feedback inhibitor 1 0.0239777
HSPH1 heat shock 105kDa/110kDa protein 1 0.0234046
UBR2 ubiquitin protein ligase E3 component n-recognin 2 0.0229169
ZNRF3 zinc and ring finger 3 0.0229056
PDIA3 protein disulfide isomerase family A, member 3 0.0227053
RBCK1 RanBP-type and C3HC4-type zinc finger containing 1 0.0225125
PLEKHA5 pleckstrin homology domain containing, family A member 5 0.0224478
KRT18 keratin 18, type I 0.0221621
EIF4G1 eukaryotic translation initiation factor 4 gamma, 1 0.0220522
SFTPA2 surfactant protein A2 0.0219484
NCOR2 nuclear receptor corepressor 2 0.0218
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0217781
BRD2 bromodomain containing 2 0.0217604
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0217462
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 0.021732
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0216677
CMIP c-Maf inducing protein 0.0214768
MAP2K6 mitogen-activated protein kinase kinase 6 0.0214405
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 0.0213303
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0212495
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0212265
APP amyloid beta (A4) precursor protein 0.0209542
DIP2B DIP2 disco-interacting protein 2 homolog B (Drosophila) 0.0208414
CEMIP2 cell migration inducing hyaluronidase 2 0.0208293
CHST15 carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 0.0207887
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.0207359
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.020687
DST dystonin 0.0205711
PRRC2B proline-rich coiled-coil 2B 0.0205568
NRDC nardilysin convertase 0.0205377
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0202338
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 0.0199673
LRP5 low density lipoprotein receptor-related protein 5 0.0199023

decreased expression

Symbol Name Standardized Value
TPT1 tumor protein, translationally-controlled 1 -0.122242
MACC1 metastasis associated in colon cancer 1 -0.120589
MYO1E myosin IE -0.0874183
VCL vinculin -0.0828142
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.079578
SP100 SP100 nuclear antigen -0.0772485
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0739044
SPATA13 spermatogenesis associated 13 -0.0652883
ZMYND8 zinc finger, MYND-type containing 8 -0.0588796
NCKAP5 NCK-associated protein 5 -0.0544533
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0521067
NPEPPS aminopeptidase puromycin sensitive -0.051802
PAN3 PAN3 poly(A) specific ribonuclease subunit -0.0507362
ARHGAP5 Rho GTPase activating protein 5 -0.0503618
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2 -0.0499927
ERBIN erbb2 interacting protein -0.0495439
MBNL2 muscleblind-like splicing regulator 2 -0.049322
PATJ PATJ crumbs cell polarity complex component -0.0488951
EPSTI1 epithelial stromal interaction 1 (breast) -0.0481118
PLSCR1 phospholipid scramblase 1 -0.047338
TJP1 tight junction protein 1 -0.0472906
KLF6 Kruppel-like factor 6 -0.0459165
RIGI RNA sensor RIG-I -0.0443489
LOC102724023 ES1 protein homolog, mitochondrial -0.0434213
ETV6 ets variant 6 -0.0429093
MPHOSPH8 M-phase phosphoprotein 8 -0.0424486
DIAPH3 diaphanous-related formin 3 -0.0423372
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0411496
ZNF292 zinc finger protein 292 -0.0409316
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0407554
TNFRSF21 tumor necrosis factor receptor superfamily, member 21 -0.0406236
MUC20 mucin 20, cell surface associated -0.0405038
WSB1 WD repeat and SOCS box containing 1 -0.0403737
AREG amphiregulin -0.0400585
TMEM62 transmembrane protein 62 -0.0400055
KLF5 Kruppel-like factor 5 (intestinal) -0.0398745
SPATS2L spermatogenesis associated, serine-rich 2-like -0.0395059
EIF1 eukaryotic translation initiation factor 1 -0.0385005
MKI67 marker of proliferation Ki-67 -0.0375805
PLAUR plasminogen activator, urokinase receptor -0.0375705
FMN1 formin 1 -0.0375012
BRCA2 breast cancer 2, early onset -0.0372801
PARP4 poly (ADP-ribose) polymerase family, member 4 -0.0368639
H1-0 H1.0 linker histone -0.0360085
RBM39 RNA binding motif protein 39 -0.0359615
AKAP13 A kinase (PRKA) anchor protein 13 -0.0354718
JUN jun proto-oncogene -0.035242
TACSTD2 tumor-associated calcium signal transducer 2 -0.0348964
STK24 serine/threonine kinase 24 -0.0348156
AP3B1 adaptor-related protein complex 3, beta 1 subunit -0.0346517
CPEB4 cytoplasmic polyadenylation element binding protein 4 -0.0343132
GCC2 GRIP and coiled-coil domain containing 2 -0.0328056
EPS8 epidermal growth factor receptor pathway substrate 8 -0.0322573
C6ORF132 chromosome 6 open reading frame 132 -0.0316008
CENPF centromere protein F, 350/400kDa -0.0307037
MON2 MON2 homolog (S. cerevisiae) -0.0303387
XAF1 XIAP associated factor 1 -0.0294894
MECOM MDS1 and EVI1 complex locus -0.0293822
MINDY2 MINDY lysine 48 deubiquitinase 2 -0.0292505
ANKHD1 ankyrin repeat and KH domain containing 1 -0.0290926
SCAPER S-phase cyclin A-associated protein in the ER -0.0289205
NF1 neurofibromin 1 -0.0284928
ANKRD10 ankyrin repeat domain 10 -0.0283041
ST14 suppression of tumorigenicity 14 (colon carcinoma) -0.0282538
MX2 MX dynamin-like GTPase 2 -0.0277932
FNIP1 folliculin interacting protein 1 -0.0277286
NUCKS1 nuclear casein kinase and cyclin-dependent kinase substrate 1 -0.0277271
SDCBP2 syndecan binding protein (syntenin) 2 -0.0271281
XDH xanthine dehydrogenase -0.0269568
RAD51B RAD51 paralog B -0.0269402
TM4SF1 transmembrane 4 L six family member 1 -0.0267383
RAB11FIP1 RAB11 family interacting protein 1 (class I) -0.0266092
PTMA prothymosin, alpha -0.0257347
RAD21 RAD21 homolog (S. pombe) -0.0256248
USP54 ubiquitin specific peptidase 54 -0.0254821
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) -0.0254208
SLC20A2 solute carrier family 20 (phosphate transporter), member 2 -0.0252342
SAMD4A sterile alpha motif domain containing 4A -0.0252265
LMAN1 lectin, mannose-binding, 1 -0.025027
NT5C3A 5'-nucleotidase, cytosolic IIIA -0.0248423
KIF13B kinesin family member 13B -0.0248395
APOL6 apolipoprotein L, 6 -0.0246363
FZR1 fizzy/cell division cycle 20 related 1 (Drosophila) -0.0243852
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0235287
OCLN occludin -0.0234438
IFIH1 interferon induced with helicase C domain 1 -0.0234204
RABGAP1L RAB GTPase activating protein 1-like -0.0232503
RBBP6 retinoblastoma binding protein 6 -0.022777
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 -0.0226254
YTHDC1 YTH domain containing 1 -0.0225883
FNDC3A fibronectin type III domain containing 3A -0.0221595
MBD5 methyl-CpG binding domain protein 5 -0.0221359
UGCG UDP-glucose ceramide glucosyltransferase -0.0221184
THOC2 THO complex 2 -0.0216582
SMC4 structural maintenance of chromosomes 4 -0.0215195
MAL2 mal, T-cell differentiation protein 2 (gene/pseudogene) -0.0214611
ELOF1 elongation factor 1 homolog (S. cerevisiae) -0.0211775
LLGL2 lethal giant larvae homolog 2 (Drosophila) -0.0209558
FOXO3 forkhead box O3 -0.020927
ARFGEF2 ADP-ribosylation factor guanine nucleotide-exchange factor 2 (brefeldin A-inhibited) -0.0206133