Amsacrine_LS 180 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Amsacrine perturbation in LS 180 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Amsacrine_LS 180 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PTMA prothymosin, alpha 0.138152
H1-0 H1.0 linker histone 0.0948223
LMO7 LIM domain 7 0.0864846
FAT1 FAT atypical cadherin 1 0.0588033
MUC6 mucin 6, oligomeric mucus/gel-forming 0.0573089
DSPP dentin sialophosphoprotein 0.0523434
FTH1 ferritin, heavy polypeptide 1 0.0501843
EZR ezrin 0.0462169
RPL35A ribosomal protein L35a 0.0461462
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0456452
DSG2 desmoglein 2 0.0398352
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0394054
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0365432
NDRG1 N-myc downstream regulated 1 0.0352377
MYO1E myosin IE 0.0350196
TXNIP thioredoxin interacting protein 0.0346054
KRT18 keratin 18, type I 0.0336763
BZW1 basic leucine zipper and W2 domains 1 0.0330883
LOC112694756 uncharaterized LOC112694756 0.032091
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0319166
BHLHE40 basic helix-loop-helix family, member e40 0.0307886
RNF145 ring finger protein 145 0.0305391
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.030494
ANXA1 annexin A1 0.0302892
RIGI RNA sensor RIG-I 0.0302679
CENPF centromere protein F, 350/400kDa 0.030245
RLF rearranged L-myc fusion 0.0298983
PLEC plectin 0.0298965
LGR4 leucine-rich repeat containing G protein-coupled receptor 4 0.0296898
EREG epiregulin 0.0295839
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.0292588
TNS4 tensin 4 0.0287759
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2 0.0287195
FAM13A family with sequence similarity 13, member A 0.0276916
MACF1 microtubule-actin crosslinking factor 1 0.0273159
BAIAP2L1 BAI1-associated protein 2-like 1 0.0272189
GAREM1 GRB2 associated regulator of MAPK1 subtype 1 0.0270665
KMT2E lysine (K)-specific methyltransferase 2E 0.0262415
KDM3A lysine (K)-specific demethylase 3A 0.0259973
CD44 CD44 molecule (Indian blood group) 0.0258057
VEGFA vascular endothelial growth factor A 0.0248491
PTPRR protein tyrosine phosphatase, receptor type, R 0.0248241
FNBP1L formin binding protein 1-like 0.0244126
TSC22D2 TSC22 domain family, member 2 0.0243459
SNX9 sorting nexin 9 0.0236189
HMGA1 high mobility group AT-hook 1 0.0229304
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.0217931
ESYT2 extended synaptotagmin-like protein 2 0.0213359
WAC WW domain containing adaptor with coiled-coil 0.0212332
PPP2R5E protein phosphatase 2, regulatory subunit B', epsilon isoform 0.0205711
WDR45B WD repeat domain 45B 0.0204163
RAD21 RAD21 homolog (S. pombe) 0.0203501
HNRNPK heterogeneous nuclear ribonucleoprotein K 0.0201964
HILPDA hypoxia inducible lipid droplet-associated 0.0200525
CD109 CD109 molecule 0.0199698
SMAD2 SMAD family member 2 0.019915
C3ORF52 chromosome 3 open reading frame 52 0.019865
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.0196377
EMP1 epithelial membrane protein 1 0.0195032
KCMF1 potassium channel modulatory factor 1 0.0194577
CDH17 cadherin 17, LI cadherin (liver-intestine) 0.0194304
TMEM123 transmembrane protein 123 0.0191735
CD2AP CD2-associated protein 0.0189188
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0188038
FBXO11 F-box protein 11 0.0184895
FN1 fibronectin 1 0.01845
TLK1 tousled-like kinase 1 0.0183997
CNOT2 CCR4-NOT transcription complex, subunit 2 0.0181885
GSTP1 glutathione S-transferase pi 1 0.0181473
SCAF11 SR-related CTD-associated factor 11 0.0180019
DNAJC1 DnaJ (Hsp40) homolog, subfamily C, member 1 0.0178212
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) 0.0177999
MARCHF6 membrane associated ring-CH-type finger 6 0.017761
PSMA7 proteasome (prosome, macropain) subunit, alpha type, 7 0.0177569
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2 0.0176731
SEC23A Sec23 homolog A (S. cerevisiae) 0.0175399
PLAUR plasminogen activator, urokinase receptor 0.0175304
USP3 ubiquitin specific peptidase 3 0.0174986
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0172715
PGK1 phosphoglycerate kinase 1 0.017266
DNM2 dynamin 2 0.0172164
ABHD2 abhydrolase domain containing 2 0.0169463
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 0.0167459
TRA2A transformer 2 alpha homolog (Drosophila) 0.0167134
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0166741
TENT5A terminal nucleotidyltransferase 5A 0.0166295
SEPTIN7 septin 7 0.0165425
PPDPF pancreatic progenitor cell differentiation and proliferation factor 0.0163945
KPNB1 karyopherin (importin) beta 1 0.0163826
CD46 CD46 molecule, complement regulatory protein 0.0163206
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) 0.0161311
GDF15 growth differentiation factor 15 0.0160364
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.0159936
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme 0.0159607
OAZ1 ornithine decarboxylase antizyme 1 0.0158991
UGCG UDP-glucose ceramide glucosyltransferase 0.0158772
MXI1 MAX interactor 1, dimerization protein 0.015877
TPI1 triosephosphate isomerase 1 0.0157958
IRF2BP2 interferon regulatory factor 2 binding protein 2 0.0157339
NAMPT nicotinamide phosphoribosyltransferase 0.0156612

decreased expression

Symbol Name Standardized Value
NPSR1 neuropeptide S receptor 1 -0.176381
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.122958
NALF1 NALCN channel auxiliary factor 1 -0.116365
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 -0.106809
GMDS GDP-mannose 4,6-dehydratase -0.106772
RPS27A ribosomal protein S27a -0.0957766
RPS12 ribosomal protein S12 -0.0920165
TMSB10 thymosin beta 10 -0.0876655
UBC ubiquitin C -0.0860186
VCL vinculin -0.0835796
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B -0.0774787
FHIT fragile histidine triad -0.0746752
CALR calreticulin -0.0728614
PTPRK protein tyrosine phosphatase, receptor type, K -0.07281
CCSER1 coiled-coil serine-rich protein 1 -0.0703136
AHNAK AHNAK nucleoprotein -0.0661607
PCBP2 poly(rC) binding protein 2 -0.0659596
ACTN4 actinin, alpha 4 -0.0646805
PDIA4 protein disulfide isomerase family A, member 4 -0.0628827
S100A6 S100 calcium binding protein A6 -0.0619398
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) -0.0618349
GREB1L growth regulation by estrogen in breast cancer-like -0.0601088
RPL26 ribosomal protein L26 -0.0583612
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0578656
SMYD3 SET and MYND domain containing 3 -0.0556658
FLNB filamin B, beta -0.0552198
PTEN phosphatase and tensin homolog -0.0537591
ANK3 ankyrin 3, node of Ranvier (ankyrin G) -0.0529037
RPS3 ribosomal protein S3 -0.0526511
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0521248
PATJ PATJ crumbs cell polarity complex component -0.0518045
SLC35F3 solute carrier family 35, member F3 -0.0514637
PDE4D phosphodiesterase 4D, cAMP-specific -0.0513565
LRBA LPS-responsive vesicle trafficking, beach and anchor containing -0.0506155
MBNL1 muscleblind-like splicing regulator 1 -0.0485891
CDC42BPA CDC42 binding protein kinase alpha (DMPK-like) -0.0474933
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.04685
MAML2 mastermind-like 2 (Drosophila) -0.0461821
RPL23 ribosomal protein L23 -0.045638
CANX calnexin -0.0454222
GPHN gephyrin -0.0450559
SEL1L sel-1 suppressor of lin-12-like (C. elegans) -0.0449374
RPS8 ribosomal protein S8 -0.0448618
DIAPH2 diaphanous-related formin 2 -0.044535
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0438296
VMP1 vacuole membrane protein 1 -0.043518
CEMIP cell migration inducing protein, hyaluronan binding -0.0435098
ASPH aspartate beta-hydroxylase -0.0433598
EXOC4 exocyst complex component 4 -0.0423261
BTBD9 BTB (POZ) domain containing 9 -0.0420674
MBD5 methyl-CpG binding domain protein 5 -0.0420482
ZSWIM6 zinc finger, SWIM-type containing 6 -0.0419849
PRELID2 PRELI domain containing 2 -0.0419079
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide -0.0410927
ENO1 enolase 1, (alpha) -0.0403095
ATXN1 ataxin 1 -0.0402665
TPT1 tumor protein, translationally-controlled 1 -0.0401492
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0392677
KDM4C lysine (K)-specific demethylase 4C -0.0389645
RAD51B RAD51 paralog B -0.0386592
PDIA3 protein disulfide isomerase family A, member 3 -0.0385204
MYL6 myosin, light chain 6, alkali, smooth muscle and non-muscle -0.0384427
TRAPPC9 trafficking protein particle complex 9 -0.0382978
SFPQ splicing factor proline/glutamine-rich -0.0378106
RPS6 ribosomal protein S6 -0.0373551
TAS2R14 taste receptor, type 2, member 14 -0.0371337
DENND1A DENN/MADD domain containing 1A -0.0370309
PARD3B par-3 family cell polarity regulator beta -0.0365439
TBC1D22A TBC1 domain family, member 22A -0.0363279
DLGAP1 discs, large (Drosophila) homolog-associated protein 1 -0.036205
SBF2 SET binding factor 2 -0.0361306
PTPRB protein tyrosine phosphatase, receptor type, B -0.0357338
RPL9 ribosomal protein L9 -0.0356719
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0355232
SLCO1B3-SLCO1B7 SLCO1B3-SLCO1B7 readthrough -0.0355199
MBNL2 muscleblind-like splicing regulator 2 -0.0353281
LAMA4 laminin, alpha 4 -0.0352877
NEBL nebulette -0.0348676
TTC3 tetratricopeptide repeat domain 3 -0.034685
RPLP2 ribosomal protein, large, P2 -0.034609
TRIO trio Rho guanine nucleotide exchange factor -0.0344949
GOLGA4 golgin A4 -0.0340304
PKM pyruvate kinase, muscle -0.0336963
MYO1D myosin ID -0.0334475
ZBTB20 zinc finger and BTB domain containing 20 -0.0333633
FRMD5 FERM domain containing 5 -0.0333555
LPP LIM domain containing preferred translocation partner in lipoma -0.0327519
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 -0.0325729
KDM4B lysine (K)-specific demethylase 4B -0.0325414
RIN2 Ras and Rab interactor 2 -0.0320187
PTPRE protein tyrosine phosphatase, receptor type, E -0.0314193
CACNB2 calcium channel, voltage-dependent, beta 2 subunit -0.0312855
RPS2 ribosomal protein S2 -0.0309399
MAP4 microtubule-associated protein 4 -0.0308228
PDLIM5 PDZ and LIM domain 5 -0.030701
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 -0.0305452
ZCCHC7 zinc finger, CCHC domain containing 7 -0.0302425
PDIA6 protein disulfide isomerase family A, member 6 -0.0299919
CADPS2 Ca++-dependent secretion activator 2 -0.0299548
RPS19 ribosomal protein S19 -0.0298952