Amsacrine_MIA PaCa-2 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Amsacrine perturbation in MIA PaCa-2 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Amsacrine_MIA PaCa-2 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTH1 ferritin, heavy polypeptide 1 0.152493
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.11287
CAPRIN2 caprin family member 2 0.104235
HLA-B major histocompatibility complex, class I, B 0.097377
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0743789
FTL ferritin, light polypeptide 0.0638404
KMT2E lysine (K)-specific methyltransferase 2E 0.0599937
RAB7A RAB7A, member RAS oncogene family 0.0590438
POTEF POTE ankyrin domain family, member F 0.0553514
FMNL2 formin-like 2 0.0519037
SERPINA3 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 3 0.0496505
ZDHHC14 zinc finger, DHHC-type containing 14 0.04837
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0476535
RPS12 ribosomal protein S12 0.0443466
PLEC plectin 0.0436603
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0433489
VEGFA vascular endothelial growth factor A 0.0429589
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3 0.0422485
SPAG9 sperm associated antigen 9 0.0419963
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0418645
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2 0.041385
GNPDA1 glucosamine-6-phosphate deaminase 1 0.0413307
SDK1 sidekick cell adhesion molecule 1 0.0410063
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.040767
HLA-A major histocompatibility complex, class I, A 0.0394308
SFTPA2 surfactant protein A2 0.0388981
SOD2 superoxide dismutase 2, mitochondrial 0.0386976
ENO2 enolase 2 (gamma, neuronal) 0.0378832
CADM2 cell adhesion molecule 2 0.0376746
TXNIP thioredoxin interacting protein 0.0376511
CCNL1 cyclin L1 0.036534
H1-0 H1.0 linker histone 0.0364436
OSBPL8 oxysterol binding protein-like 8 0.0361803
ZSWIM6 zinc finger, SWIM-type containing 6 0.035864
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 0.0347505
MKLN1 muskelin 1, intracellular mediator containing kelch motifs 0.0343168
LUC7L3 LUC7-like 3 (S. cerevisiae) 0.0339385
WAC WW domain containing adaptor with coiled-coil 0.0335136
TSC22D2 TSC22 domain family, member 2 0.0333177
WWTR1 WW domain containing transcription regulator 1 0.0328954
BRD2 bromodomain containing 2 0.0323283
NDRG1 N-myc downstream regulated 1 0.0317468
RPS6 ribosomal protein S6 0.0311927
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.031038
B2M beta-2-microglobulin 0.0307317
HELZ helicase with zinc finger 0.030727
PLIN2 perilipin 2 0.0304818
GYS1 glycogen synthase 1 (muscle) 0.0301911
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0301749
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 0.0292142
CFLAR CASP8 and FADD-like apoptosis regulator 0.0289833
FXR1 fragile X mental retardation, autosomal homolog 1 0.0284441
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0282905
MT2A metallothionein 2A 0.027651
KDM2A lysine (K)-specific demethylase 2A 0.0275235
HLA-C major histocompatibility complex, class I, C 0.0272567
SLK STE20-like kinase 0.0272511
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4 0.0271384
SP100 SP100 nuclear antigen 0.0270895
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0270845
KRT18 keratin 18, type I 0.0269444
TGM2 transglutaminase 2 0.0269382
HILPDA hypoxia inducible lipid droplet-associated 0.0269228
DNER delta/notch-like EGF repeat containing 0.0268449
LRCH3 leucine-rich repeats and calponin homology (CH) domain containing 3 0.0265736
PFN1 profilin 1 0.0265087
WSB1 WD repeat and SOCS box containing 1 0.0263492
GLS2 glutaminase 2 (liver, mitochondrial) 0.0259785
APLP2 amyloid beta (A4) precursor-like protein 2 0.0258559
RPS19 ribosomal protein S19 0.0258052
CLIP2 CAP-GLY domain containing linker protein 2 0.0255451
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0251998
RNF213 ring finger protein 213 0.0248739
CNOT1 CCR4-NOT transcription complex, subunit 1 0.0247471
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0247364
RPL19 ribosomal protein L19 0.0246958
PMEPA1 prostate transmembrane protein, androgen induced 1 0.0244689
PCDH1 protocadherin 1 0.0242662
HLA-E major histocompatibility complex, class I, E 0.0242219
RPL37A ribosomal protein L37a 0.0241814
INTS6 integrator complex subunit 6 0.0241058
KTN1 kinectin 1 (kinesin receptor) 0.0240785
PIAS2 protein inhibitor of activated STAT, 2 0.0240384
ECE1 endothelin converting enzyme 1 0.0239708
YAP1 Yes-associated protein 1 0.0239532
FNDC3B fibronectin type III domain containing 3B 0.023819
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0237817
SDC4 syndecan 4 0.0235098
PRKCE protein kinase C, epsilon 0.0233811
GNGT1 guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 0.0233715
SOX9 SRY (sex determining region Y)-box 9 0.0233668
DDX41 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 0.0233307
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0230173
RPL11 ribosomal protein L11 0.0224584
FOSL1 FOS-like antigen 1 0.0223758
BIRC3 baculoviral IAP repeat containing 3 0.0223014
RPL36 ribosomal protein L36 0.0220275
RPS10 ribosomal protein S10 0.0219372
RFFL ring finger and FYVE-like domain containing E3 ubiquitin protein ligase 0.0216815
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0214275

decreased expression

Symbol Name Standardized Value
VIM vimentin -0.279225
TXNRD1 thioredoxin reductase 1 -0.231085
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.170763
TM4SF1 transmembrane 4 L six family member 1 -0.129895
AHNAK AHNAK nucleoprotein -0.118258
RAI1 retinoic acid induced 1 -0.108796
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.103374
IL1RAPL1 interleukin 1 receptor accessory protein-like 1 -0.10083
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 -0.100479
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 -0.0902334
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0856548
CD44 CD44 molecule (Indian blood group) -0.08476
DLG1 discs, large homolog 1 (Drosophila) -0.083891
TMSB10 thymosin beta 10 -0.0838773
UBC ubiquitin C -0.0813561
TP63 tumor protein p63 -0.0792494
USP34 ubiquitin specific peptidase 34 -0.0764764
ZMYND8 zinc finger, MYND-type containing 8 -0.0759901
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0759827
SLC38A2 solute carrier family 38, member 2 -0.0754443
CANX calnexin -0.0748505
GBE1 glucan (1,4-alpha-), branching enzyme 1 -0.0695032
IGF2BP3 insulin-like growth factor 2 mRNA binding protein 3 -0.0669937
APP amyloid beta (A4) precursor protein -0.0648708
PSD3 pleckstrin and Sec7 domain containing 3 -0.0610071
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0595032
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.059074
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 -0.0577532
RPS27A ribosomal protein S27a -0.05404
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0514449
EHBP1 EH domain binding protein 1 -0.0488574
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 -0.0485462
LDHA lactate dehydrogenase A -0.0484258
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0472237
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0446661
ACTG1 actin gamma 1 -0.0423242
RGS4 regulator of G-protein signaling 4 -0.0419617
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0410982
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) -0.0401919
ZNF217 zinc finger protein 217 -0.0399635
RTN4 reticulon 4 -0.039956
JUN jun proto-oncogene -0.0395455
SLC25A36 solute carrier family 25 (pyrimidine nucleotide carrier), member 36 -0.0393983
ENO1 enolase 1, (alpha) -0.0385841
CENPF centromere protein F, 350/400kDa -0.038373
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein) -0.037187
THSD4 thrombospondin, type I, domain containing 4 -0.03673
RIGI RNA sensor RIG-I -0.0363191
PGK1 phosphoglycerate kinase 1 -0.0353517
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 -0.0342467
UACA uveal autoantigen with coiled-coil domains and ankyrin repeats -0.0341545
FLNB filamin B, beta -0.0341454
BABAM2 BRISC and BRCA1 A complex member 2 -0.0339872
BMERB1 bMERB domain containing 1 -0.0339767
ARHGAP5 Rho GTPase activating protein 5 -0.0336921
DOCK11 dedicator of cytokinesis 11 -0.0336827
GPAT3 glycerol-3-phosphate acyltransferase 3 -0.0336791
WARS1 tryptophanyl-tRNA synthetase 1 -0.0333033
UPP1 uridine phosphorylase 1 -0.03283
CFAP299 cilia and flagella associated protein 299 -0.0324867
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein -0.0317721
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0315427
TMEM41B transmembrane protein 41B -0.031508
ZEB1 zinc finger E-box binding homeobox 1 -0.0313588
AHNAK2 AHNAK nucleoprotein 2 -0.0307294
ARHGAP29 Rho GTPase activating protein 29 -0.0306329
HDLBP high density lipoprotein binding protein -0.0303892
ADARB1 adenosine deaminase, RNA-specific, B1 -0.0293938
RPL4 ribosomal protein L4 -0.0293775
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0288253
EIF3A eukaryotic translation initiation factor 3, subunit A -0.0286652
MKI67 marker of proliferation Ki-67 -0.0284208
RASAL2 RAS protein activator like 2 -0.0280159
EMP1 epithelial membrane protein 1 -0.0276179
STXBP5 syntaxin binding protein 5 (tomosyn) -0.0273699
ACACA acetyl-CoA carboxylase alpha -0.0272982
TOP2A topoisomerase (DNA) II alpha 170kDa -0.0272801
MIB1 mindbomb E3 ubiquitin protein ligase 1 -0.0271132
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa -0.0270661
EREG epiregulin -0.0270512
CAPN2 calpain 2, (m/II) large subunit -0.0270455
NAV2 neuron navigator 2 -0.0268747
EIF1 eukaryotic translation initiation factor 1 -0.0267731
ADGRG6 adhesion G protein-coupled receptor G6 -0.0265209
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0261503
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0260538
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0259165
NAMPT nicotinamide phosphoribosyltransferase -0.0259101
FERMT1 fermitin family member 1 -0.0256594
CEP170 centrosomal protein 170kDa -0.0256148
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0256003
SFPQ splicing factor proline/glutamine-rich -0.0255062
ERCC6L2 excision repair cross-complementation group 6-like 2 -0.0250924
PUS7 pseudouridylate synthase 7 (putative) -0.0248388
ANTXR2 anthrax toxin receptor 2 -0.0246744
SINHCAF SIN3-HDAC complex associated factor -0.0241388
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 -0.0241203
IPO7 importin 7 -0.0238458
RAD21 RAD21 homolog (S. pombe) -0.0237509
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9 -0.0237405