Amsacrine_NCI-H1573 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Amsacrine perturbation in NCI-H1573 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Amsacrine_NCI-H1573 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
GRAMD1B GRAM domain containing 1B 0.133699
CES1 carboxylesterase 1 0.112977
THSD4 thrombospondin, type I, domain containing 4 0.10138
FAM13A family with sequence similarity 13, member A 0.0885282
CEMIP cell migration inducing protein, hyaluronan binding 0.0871495
PLEC plectin 0.0842353
MYH9 myosin, heavy chain 9, non-muscle 0.0735148
MCL1 myeloid cell leukemia 1 0.0722211
PDE4D phosphodiesterase 4D, cAMP-specific 0.0709886
TSC22D2 TSC22 domain family, member 2 0.0703049
SPAG9 sperm associated antigen 9 0.0697133
KMT2E lysine (K)-specific methyltransferase 2E 0.066961
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.066926
MACF1 microtubule-actin crosslinking factor 1 0.0647326
SLTM SAFB-like, transcription modulator 0.0643901
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0641806
TOP1 topoisomerase (DNA) I 0.0616448
UBA6 ubiquitin-like modifier activating enzyme 6 0.0609122
FTH1 ferritin, heavy polypeptide 1 0.0582808
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0580264
GSK3B glycogen synthase kinase 3 beta 0.056626
ANKRD11 ankyrin repeat domain 11 0.0536658
BCAR3 breast cancer anti-estrogen resistance 3 0.0534079
LOC112694756 uncharaterized LOC112694756 0.0529466
SMAD3 SMAD family member 3 0.0522451
PHLDA1 pleckstrin homology-like domain, family A, member 1 0.0518852
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0516779
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0492267
EGFR epidermal growth factor receptor 0.0477557
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0475732
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.047346
ELL2 elongation factor, RNA polymerase II, 2 0.0471492
DTNA dystrobrevin, alpha 0.0470338
RUNX1 runt-related transcription factor 1 0.046073
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0459313
APLP2 amyloid beta (A4) precursor-like protein 2 0.0452704
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.0451728
RNF145 ring finger protein 145 0.0441883
TBC1D22A TBC1 domain family, member 22A 0.0441852
SAMD4A sterile alpha motif domain containing 4A 0.0437321
ATP13A3 ATPase type 13A3 0.0436562
TNFAIP8 tumor necrosis factor, alpha-induced protein 8 0.0429791
ATP11A ATPase, class VI, type 11A 0.0421482
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0413551
SHANK2 SH3 and multiple ankyrin repeat domains 2 0.0412764
MYOF myoferlin 0.0410266
HYOU1 hypoxia up-regulated 1 0.0407723
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0405523
EEF2 eukaryotic translation elongation factor 2 0.0400219
DOCK5 dedicator of cytokinesis 5 0.0392247
HELZ helicase with zinc finger 0.0383277
MSN moesin 0.0377821
PTPN12 protein tyrosine phosphatase, non-receptor type 12 0.0364563
BRD2 bromodomain containing 2 0.03642
CSNK1A1 casein kinase 1, alpha 1 0.0360977
INTS6 integrator complex subunit 6 0.0357246
ANKRD37 ankyrin repeat domain 37 0.0355662
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0343709
PM20D1 peptidase M20 domain containing 1 0.0343148
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.0338849
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.033437
FAT1 FAT atypical cadherin 1 0.033269
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.0331422
PCBP2 poly(rC) binding protein 2 0.0330467
FNDC3B fibronectin type III domain containing 3B 0.0328824
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.0326537
CSNK1E casein kinase 1, epsilon 0.032249
GCLC glutamate-cysteine ligase, catalytic subunit 0.0321016
SHB Src homology 2 domain containing adaptor protein B 0.0318874
FHIP1A FHF complex subunit HOOK interacting protein 1A 0.0315043
PTK2 protein tyrosine kinase 2 0.0313805
VEGFC vascular endothelial growth factor C 0.0313784
KDM6A lysine (K)-specific demethylase 6A 0.0310899
PDE8A phosphodiesterase 8A 0.0308969
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0308189
SON SON DNA binding protein 0.030814
HMGA2 high mobility group AT-hook 2 0.0306228
NEDD4L neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 0.030267
NPAS2 neuronal PAS domain protein 2 0.0299445
HILPDA hypoxia inducible lipid droplet-associated 0.0299154
TRAPPC9 trafficking protein particle complex 9 0.0299052
SCEL sciellin 0.0295807
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0295253
NPTN neuroplastin 0.0294117
JMJD1C jumonji domain containing 1C 0.0293617
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0292642
ATP1A4 ATPase, Na+/K+ transporting, alpha 4 polypeptide 0.0291962
TRIP12 thyroid hormone receptor interactor 12 0.0291354
HUWE1 HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase 0.0288645
OGT O-linked N-acetylglucosamine (GlcNAc) transferase 0.0287851
EPAS1 endothelial PAS domain protein 1 0.0287371
YAP1 Yes-associated protein 1 0.0284299
MAP3K20 mitogen-activated protein kinase kinase kinase 20 0.0284258
SVIL supervillin 0.0283
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.028276
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha 0.0281064
FLNA filamin A, alpha 0.0280751
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.027957
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.027279
MED13L mediator complex subunit 13-like 0.0272097

decreased expression

Symbol Name Standardized Value
TMSB10 thymosin beta 10 -0.182366
TPT1 tumor protein, translationally-controlled 1 -0.147229
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.133266
LRP1B low density lipoprotein receptor-related protein 1B -0.115704
TXNRD1 thioredoxin reductase 1 -0.0985329
LAMC2 laminin, gamma 2 -0.0943422
AKR1C1 aldo-keto reductase family 1, member C1 -0.0876255
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0812692
ASPH aspartate beta-hydroxylase -0.0756756
SLC38A1 solute carrier family 38, member 1 -0.0748992
B2M beta-2-microglobulin -0.0745717
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.0724547
PTPRM protein tyrosine phosphatase, receptor type, M -0.0721826
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0712581
RPL35A ribosomal protein L35a -0.0684698
LMO7 LIM domain 7 -0.0671989
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0662277
RPS24 ribosomal protein S24 -0.0650797
S100A10 S100 calcium binding protein A10 -0.0633574
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0631357
EFNA5 ephrin-A5 -0.0629907
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0627169
RPL34 ribosomal protein L34 -0.0592351
ACTG1 actin gamma 1 -0.0557833
ZMYND8 zinc finger, MYND-type containing 8 -0.0537247
RPS3 ribosomal protein S3 -0.0535297
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0533999
ANKRD10 ankyrin repeat domain 10 -0.0529182
TMTC2 transmembrane and tetratricopeptide repeat containing 2 -0.0526102
CAV1 caveolin 1, caveolae protein, 22kDa -0.0522524
PTMA prothymosin, alpha -0.0511726
PATJ PATJ crumbs cell polarity complex component -0.0506094
SEMA4B sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4B -0.0497094
RPS25 ribosomal protein S25 -0.0473766
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0472835
RPS8 ribosomal protein S8 -0.0472449
HLA-B major histocompatibility complex, class I, B -0.0467331
SCD stearoyl-CoA desaturase (delta-9-desaturase) -0.0465665
IFI6 interferon, alpha-inducible protein 6 -0.0464175
TRIM56 tripartite motif containing 56 -0.046163
CST3 cystatin C -0.045821
GPRC5A G protein-coupled receptor, class C, group 5, member A -0.0446317
GM2A GM2 ganglioside activator -0.0421604
LAMB3 laminin, beta 3 -0.0419731
EIF1 eukaryotic translation initiation factor 1 -0.0412659
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) -0.0410618
EGR1 early growth response 1 -0.0405473
PARP14 poly (ADP-ribose) polymerase family, member 14 -0.0393068
NCOA7 nuclear receptor coactivator 7 -0.0383757
C15ORF48 chromosome 15 open reading frame 48 -0.0377041
FTL ferritin, light polypeptide -0.0373622
RPL31 ribosomal protein L31 -0.0364738
ACSL3 acyl-CoA synthetase long-chain family member 3 -0.0338005
KRT7 keratin 7, type II -0.0327628
SPTSSA serine palmitoyltransferase, small subunit A -0.0318524
ANKLE2 ankyrin repeat and LEM domain containing 2 -0.0313427
RPS27A ribosomal protein S27a -0.030993
S100A6 S100 calcium binding protein A6 -0.0309284
RPL37 ribosomal protein L37 -0.0309057
EIF2AK2 eukaryotic translation initiation factor 2-alpha kinase 2 -0.0303856
ZBTB20 zinc finger and BTB domain containing 20 -0.030385
AGR2 anterior gradient 2 -0.0302555
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 -0.0301077
GNAS GNAS complex locus -0.0293044
S100A11 S100 calcium binding protein A11 -0.0287985
LDHA lactate dehydrogenase A -0.0282706
RPS29 ribosomal protein S29 -0.0281524
RAB27B RAB27B, member RAS oncogene family -0.028035
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0280329
RAD21 RAD21 homolog (S. pombe) -0.0279948
NSUN6 NOP2/Sun domain family, member 6 -0.0279529
AREG amphiregulin -0.0279414
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0278974
S100A9 S100 calcium binding protein A9 -0.0276301
RPLP1 ribosomal protein, large, P1 -0.0275056
ADGRF1 adhesion G protein-coupled receptor F1 -0.0270434
RPL26 ribosomal protein L26 -0.0269294
IER3 immediate early response 3 -0.0266918
RPL37A ribosomal protein L37a -0.0265875
RPL11 ribosomal protein L11 -0.0264565
RAB1A RAB1A, member RAS oncogene family -0.026305
RPL30 ribosomal protein L30 -0.0262071
BTG1 B-cell translocation gene 1, anti-proliferative -0.0261303
TKT transketolase -0.0261091
RPL19 ribosomal protein L19 -0.0252277
SMIM31 small integral membrane protein 31 -0.0251996
RSL1D1 ribosomal L1 domain containing 1 -0.0251976
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta -0.0244358
RPS27 ribosomal protein S27 -0.024271
RPL36A ribosomal protein L36a -0.0240208
RIGI RNA sensor RIG-I -0.0240095
PLSCR1 phospholipid scramblase 1 -0.0236705
KPNB1 karyopherin (importin) beta 1 -0.0235563
ELF2 E74-like factor 2 (ets domain transcription factor) -0.0230995
ARHGAP5 Rho GTPase activating protein 5 -0.022743
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0227272
PJA2 praja ring finger 2, E3 ubiquitin protein ligase -0.0226396
ANKRD12 ankyrin repeat domain 12 -0.0223271
LPP LIM domain containing preferred translocation partner in lipoma -0.0223035
PGK1 phosphoglycerate kinase 1 -0.022181