Amsacrine_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Amsacrine perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Amsacrine_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
FTH1 ferritin, heavy polypeptide 1 0.164637
SMOC1 SPARC related modular calcium binding 1 0.0599969
EEF2 eukaryotic translation elongation factor 2 0.0543078
AKAP12 A kinase (PRKA) anchor protein 12 0.0503898
PM20D1 peptidase M20 domain containing 1 0.0486808
FLNB filamin B, beta 0.0424574
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0400972
PHLDB2 pleckstrin homology-like domain, family B, member 2 0.0380145
AHNAK AHNAK nucleoprotein 0.03706
SYNE2 spectrin repeat containing, nuclear envelope 2 0.0368355
MYH9 myosin, heavy chain 9, non-muscle 0.0359656
KYNU kynureninase 0.0353642
SAMD4A sterile alpha motif domain containing 4A 0.033841
SOD2 superoxide dismutase 2, mitochondrial 0.033347
PLEC plectin 0.0332501
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0320679
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0320441
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0315978
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0312135
DOCK5 dedicator of cytokinesis 5 0.0305072
FLNA filamin A, alpha 0.0296029
FMNL2 formin-like 2 0.0292902
CMIP c-Maf inducing protein 0.0287825
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0272008
SHANK2 SH3 and multiple ankyrin repeat domains 2 0.0264898
WAC WW domain containing adaptor with coiled-coil 0.0260354
BRD2 bromodomain containing 2 0.0256494
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive 0.0256461
USP36 ubiquitin specific peptidase 36 0.0242717
MCL1 myeloid cell leukemia 1 0.023683
SFTPA2 surfactant protein A2 0.0235611
STC1 stanniocalcin 1 0.0232044
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.0228083
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa 0.022673
COPA coatomer protein complex, subunit alpha 0.0226069
IFIT2 interferon-induced protein with tetratricopeptide repeats 2 0.0219549
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.021937
APLP2 amyloid beta (A4) precursor-like protein 2 0.0219207
EPAS1 endothelial PAS domain protein 1 0.0218643
MARK3 MAP/microtubule affinity-regulating kinase 3 0.0207925
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 0.0206673
ITCH itchy E3 ubiquitin protein ligase 0.0206206
MAP7 microtubule-associated protein 7 0.020535
MACF1 microtubule-actin crosslinking factor 1 0.0204605
NDRG1 N-myc downstream regulated 1 0.0203319
EGFR epidermal growth factor receptor 0.0202817
UTRN utrophin 0.0201779
ATXN1 ataxin 1 0.0196899
MAP4K4 mitogen-activated protein kinase kinase kinase kinase 4 0.0196719
FGA fibrinogen alpha chain 0.0195313
RRM2 ribonucleotide reductase M2 0.0193661
RIGI RNA sensor RIG-I 0.0193402
MYO1E myosin IE 0.0190109
PPP6R3 protein phosphatase 6, regulatory subunit 3 0.0189535
ZSWIM6 zinc finger, SWIM-type containing 6 0.0189087
HLA-E major histocompatibility complex, class I, E 0.018773
TBC1D22A TBC1 domain family, member 22A 0.0187081
MSN moesin 0.0186422
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0179397
ANKRD11 ankyrin repeat domain 11 0.0177276
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor) 0.01727
BCAR3 breast cancer anti-estrogen resistance 3 0.0170574
PRELID2 PRELI domain containing 2 0.0168057
EXT1 exostosin glycosyltransferase 1 0.016805
TPM3 tropomyosin 3 0.0166344
NEBL nebulette 0.0165964
DOCK4 dedicator of cytokinesis 4 0.0163323
IGFBP3 insulin-like growth factor binding protein 3 0.016264
YLPM1 YLP motif containing 1 0.0161694
HLA-A major histocompatibility complex, class I, A 0.015912
PRKCA protein kinase C, alpha 0.015888
PSEN1 presenilin 1 0.0158603
KIF1B kinesin family member 1B 0.0158418
SEPTIN9 septin 9 0.0153556
SETX senataxin 0.0153352
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.0152477
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 0.0151573
GDI2 GDP dissociation inhibitor 2 0.0150319
HMGA2 high mobility group AT-hook 2 0.0149535
YTHDC1 YTH domain containing 1 0.0148598
ZNRF1 zinc and ring finger 1, E3 ubiquitin protein ligase 0.014834
INTS6 integrator complex subunit 6 0.0148125
PTPRF protein tyrosine phosphatase, receptor type, F 0.014755
UBASH3B ubiquitin associated and SH3 domain containing B 0.0147489
TRIP11 thyroid hormone receptor interactor 11 0.0146957
NPAS2 neuronal PAS domain protein 2 0.0146885
CYTH1 cytohesin 1 0.0146389
BAZ2B bromodomain adjacent to zinc finger domain, 2B 0.0145877
GABARAPL1 GABA(A) receptor-associated protein like 1 0.014507
TMF1 TATA element modulatory factor 1 0.0143499
ANO6 anoctamin 6 0.0143115
GPATCH2L G patch domain containing 2-like 0.0142007
SNX14 sorting nexin 14 0.0140579
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.0137788
LRCH3 leucine-rich repeats and calponin homology (CH) domain containing 3 0.0135882
NUMB numb homolog (Drosophila) 0.0135427
CFLAR CASP8 and FADD-like apoptosis regulator 0.0134802
CUX1 cut-like homeobox 1 0.0134357
SFPQ splicing factor proline/glutamine-rich 0.0133836
KRT18 keratin 18, type I 0.0133562

decreased expression

Symbol Name Standardized Value
MT2A metallothionein 2A -0.394325
TMSB10 thymosin beta 10 -0.21462
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.1875
FTL ferritin, light polypeptide -0.158611
GRAMD1B GRAM domain containing 1B -0.12309
VIM vimentin -0.116053
TFPI2 tissue factor pathway inhibitor 2 -0.114337
TXNRD1 thioredoxin reductase 1 -0.106312
RPL23 ribosomal protein L23 -0.0849292
EIF1 eukaryotic translation initiation factor 1 -0.0753434
PTMA prothymosin, alpha -0.0715551
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 -0.0664057
RPS21 ribosomal protein S21 -0.0663012
PDE4D phosphodiesterase 4D, cAMP-specific -0.0620884
RPLP1 ribosomal protein, large, P1 -0.0610041
ACTG1 actin gamma 1 -0.0609791
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.0559075
TM4SF1 transmembrane 4 L six family member 1 -0.0557602
RPL35A ribosomal protein L35a -0.0539194
RPS19 ribosomal protein S19 -0.0511381
S100A6 S100 calcium binding protein A6 -0.0509581
RPL19 ribosomal protein L19 -0.0490343
TPT1 tumor protein, translationally-controlled 1 -0.0434393
RPS8 ribosomal protein S8 -0.0433415
SLC38A1 solute carrier family 38, member 1 -0.0430921
C15ORF48 chromosome 15 open reading frame 48 -0.0429146
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0428045
RPL36 ribosomal protein L36 -0.0426949
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.042338
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -0.0416505
RBM39 RNA binding motif protein 39 -0.0410656
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0410114
RTN4 reticulon 4 -0.0404166
RPS29 ribosomal protein S29 -0.0402328
RPL7 ribosomal protein L7 -0.0402086
NAMPT nicotinamide phosphoribosyltransferase -0.0398244
CXCL8 chemokine (C-X-C motif) ligand 8 -0.0391854
RPS27A ribosomal protein S27a -0.037361
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0370138
RPL26 ribosomal protein L26 -0.036295
RPL4 ribosomal protein L4 -0.0347782
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0341709
ZNF292 zinc finger protein 292 -0.0340718
RAD21 RAD21 homolog (S. pombe) -0.0340059
RPS24 ribosomal protein S24 -0.0337084
RPL8 ribosomal protein L8 -0.0326392
RPS25 ribosomal protein S25 -0.032079
MYL12B myosin, light chain 12B, regulatory -0.0317859
RPL30 ribosomal protein L30 -0.0317309
ZFAND3 zinc finger, AN1-type domain 3 -0.0310949
BIRC3 baculoviral IAP repeat containing 3 -0.0310242
S100A10 S100 calcium binding protein A10 -0.0308394
RPL9 ribosomal protein L9 -0.030275
RPS5 ribosomal protein S5 -0.0301694
SERF2 small EDRK-rich factor 2 -0.0301252
RPL34 ribosomal protein L34 -0.0296718
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.0295533
RPS23 ribosomal protein S23 -0.0292506
IER3 immediate early response 3 -0.0292222
RPL5 ribosomal protein L5 -0.0291477
S100A11 S100 calcium binding protein A11 -0.0290862
RPL31 ribosomal protein L31 -0.028843
PFN1 profilin 1 -0.0286911
RACK1 receptor for activated C kinase 1 -0.0286047
PKM pyruvate kinase, muscle -0.0279231
RPS27 ribosomal protein S27 -0.0278605
YBX3 Y box binding protein 3 -0.027748
EIF3H eukaryotic translation initiation factor 3, subunit H -0.0273276
SRGN serglycin -0.0270275
MYL12A myosin, light chain 12A, regulatory, non-sarcomeric -0.0270228
RPS3 ribosomal protein S3 -0.0262463
BABAM2 BRISC and BRCA1 A complex member 2 -0.0253546
QKI QKI, KH domain containing, RNA binding -0.025301
ATP5F1E ATP synthase F1 subunit epsilon -0.0250408
NNMT nicotinamide N-methyltransferase -0.0248928
RPL36A ribosomal protein L36a -0.0243396
NQO1 NAD(P)H dehydrogenase, quinone 1 -0.0243361
RPS14 ribosomal protein S14 -0.0239
PSMC6 proteasome (prosome, macropain) 26S subunit, ATPase, 6 -0.023802
MORF4L1 mortality factor 4 like 1 -0.0236185
PTP4A1 protein tyrosine phosphatase type IVA, member 1 -0.0235974
PDLIM5 PDZ and LIM domain 5 -0.0235829
RPL38 ribosomal protein L38 -0.0234708
SLC7A11 solute carrier family 7 (anionic amino acid transporter light chain, xc- system), member 11 -0.0233743
RPS20 ribosomal protein S20 -0.0233353
FNDC3B fibronectin type III domain containing 3B -0.0227697
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0226069
RPL37 ribosomal protein L37 -0.0225479
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0222801
LMNA lamin A/C -0.0222616
RPL28 ribosomal protein L28 -0.0221116
RPS17 ribosomal protein S17 -0.0221074
RPS16 ribosomal protein S16 -0.0221017
RPLP0 ribosomal protein, large, P0 -0.0220925
RPS12 ribosomal protein S12 -0.0220694
PFDN2 prefoldin subunit 2 -0.0218511
RPL32 ribosomal protein L32 -0.0217927
PDIA3 protein disulfide isomerase family A, member 3 -0.0216744
RPLP2 ribosomal protein, large, P2 -0.0214953
LGALS1 lectin, galactoside-binding, soluble, 1 -0.0214314