Amsacrine_NCI-H2122 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Amsacrine perturbation in NCI-H2122 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Amsacrine_NCI-H2122 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
PDE4D phosphodiesterase 4D, cAMP-specific 0.182268
NDRG1 N-myc downstream regulated 1 0.0877376
KMT2E lysine (K)-specific methyltransferase 2E 0.0855226
NAV2 neuron navigator 2 0.0837312
ELL2 elongation factor, RNA polymerase II, 2 0.0833201
RPS12 ribosomal protein S12 0.0796927
PDE10A phosphodiesterase 10A 0.0744397
EEF2 eukaryotic translation elongation factor 2 0.0674856
EGFR epidermal growth factor receptor 0.0659904
KRT17 keratin 17, type I 0.0645537
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0605351
PM20D1 peptidase M20 domain containing 1 0.0603084
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0576117
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 0.0547754
COL5A2 collagen, type V, alpha 2 0.0530674
ERRFI1 ERBB receptor feedback inhibitor 1 0.052756
NALF1 NALCN channel auxiliary factor 1 0.0523816
ANO6 anoctamin 6 0.0513519
AP3B1 adaptor-related protein complex 3, beta 1 subunit 0.0501469
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2 0.0481512
GBE1 glucan (1,4-alpha-), branching enzyme 1 0.048142
SMAD3 SMAD family member 3 0.0480764
ATP2C2 ATPase, Ca++ transporting, type 2C, member 2 0.0472797
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 0.0470928
TSC22D2 TSC22 domain family, member 2 0.046022
SMOC1 SPARC related modular calcium binding 1 0.0458329
SQSTM1 sequestosome 1 0.0455512
DCBLD2 discoidin, CUB and LCCL domain containing 2 0.0451131
SLTM SAFB-like, transcription modulator 0.0443388
FMNL2 formin-like 2 0.0431851
FNBP4 formin binding protein 4 0.0429456
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) 0.0425489
DNAJC3 DnaJ (Hsp40) homolog, subfamily C, member 3 0.0424202
NKD1 naked cuticle homolog 1 (Drosophila) 0.0423229
JAK1 Janus kinase 1 0.0418024
MTUS1 microtubule associated tumor suppressor 1 0.0412251
RPS6 ribosomal protein S6 0.0410304
PHF21A PHD finger protein 21A 0.0408666
TNFAIP8 tumor necrosis factor, alpha-induced protein 8 0.0406687
BACE2 beta-site APP-cleaving enzyme 2 0.0404869
ZFAND3 zinc finger, AN1-type domain 3 0.0392359
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0392121
ESYT2 extended synaptotagmin-like protein 2 0.0390858
LOC112694756 uncharaterized LOC112694756 0.038582
PAPOLA poly(A) polymerase alpha 0.0385676
COL8A1 collagen, type VIII, alpha 1 0.0382533
GMDS GDP-mannose 4,6-dehydratase 0.0380379
KRT18 keratin 18, type I 0.0380002
ARHGAP26 Rho GTPase activating protein 26 0.0379015
PSD3 pleckstrin and Sec7 domain containing 3 0.0375692
PEAK1 pseudopodium-enriched atypical kinase 1 0.0372026
MSI2 musashi RNA-binding protein 2 0.0359584
ATP13A3 ATPase type 13A3 0.0359322
PCCA propionyl CoA carboxylase, alpha polypeptide 0.0354664
SKP1 S-phase kinase-associated protein 1 0.0354287
DYRK1A dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A 0.0352181
RERE arginine-glutamic acid dipeptide (RE) repeats 0.0352117
SSBP2 single-stranded DNA binding protein 2 0.0350316
HOOK2 hook microtubule-tethering protein 2 0.0345851
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 0.0344669
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase 0.0343973
EGLN3 egl-9 family hypoxia-inducible factor 3 0.0343456
VGF VGF nerve growth factor inducible 0.0341276
RBM5 RNA binding motif protein 5 0.033926
PDLIM5 PDZ and LIM domain 5 0.0337718
CANX calnexin 0.0333186
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0332872
TOP1 topoisomerase (DNA) I 0.0332304
MAN1A1 mannosidase, alpha, class 1A, member 1 0.033213
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic) 0.0327757
SPPL2A signal peptide peptidase like 2A 0.0327726
MYO10 myosin X 0.0319427
PTPRM protein tyrosine phosphatase, receptor type, M 0.0317963
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0317921
CD55 CD55 molecule, decay accelerating factor for complement (Cromer blood group) 0.0315465
PITPNB phosphatidylinositol transfer protein, beta 0.0314774
LAMA4 laminin, alpha 4 0.0314737
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 0.0314727
GFPT1 glutamine--fructose-6-phosphate transaminase 1 0.0313387
PTK2 protein tyrosine kinase 2 0.0313141
MMAB methylmalonic aciduria (cobalamin deficiency) cblB type 0.0311934
WDR26 WD repeat domain 26 0.0311413
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12 0.0308744
BCL2L11 BCL2-like 11 (apoptosis facilitator) 0.0308682
LRP12 low density lipoprotein receptor-related protein 12 0.0306338
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.0303337
PACSIN2 protein kinase C and casein kinase substrate in neurons 2 0.0300309
KDM6A lysine (K)-specific demethylase 6A 0.0299546
MINDY2 MINDY lysine 48 deubiquitinase 2 0.0299125
SEPTIN9 septin 9 0.0298025
CMIP c-Maf inducing protein 0.0298006
ARB2A ARB2 cotranscriptional regulator A 0.0296097
PTPN9 protein tyrosine phosphatase, non-receptor type 9 0.029527
RND3 Rho family GTPase 3 0.0294863
TPD52 tumor protein D52 0.0293557
GPHN gephyrin 0.0292438
PDIA5 protein disulfide isomerase family A, member 5 0.0291904
PIP5K1A phosphatidylinositol-4-phosphate 5-kinase, type I, alpha 0.029185
NCKAP1 NCK-associated protein 1 0.0289712
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0281635

decreased expression

Symbol Name Standardized Value
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.119393
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.114832
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) -0.0971012
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0960669
MYO1E myosin IE -0.0880569
TM4SF1 transmembrane 4 L six family member 1 -0.0846074
PHLDB2 pleckstrin homology-like domain, family B, member 2 -0.0842175
S100A10 S100 calcium binding protein A10 -0.0769621
S100A9 S100 calcium binding protein A9 -0.0755788
TMCC3 transmembrane and coiled-coil domain family 3 -0.075361
PTPN12 protein tyrosine phosphatase, non-receptor type 12 -0.0730996
POTEF POTE ankyrin domain family, member F -0.072945
TMSB10 thymosin beta 10 -0.0725399
VCAN versican -0.0708756
ANTXR2 anthrax toxin receptor 2 -0.070819
B2M beta-2-microglobulin -0.0667202
RBM47 RNA binding motif protein 47 -0.0663874
VCL vinculin -0.0656867
LMO7 LIM domain 7 -0.064573
ERO1A endoplasmic reticulum oxidoreductase 1 alpha -0.0642303
SMYD3 SET and MYND domain containing 3 -0.06355
ZNF217 zinc finger protein 217 -0.0635032
OSMR oncostatin M receptor -0.0634942
PTMA prothymosin, alpha -0.063322
CEACAM5 carcinoembryonic antigen-related cell adhesion molecule 5 -0.0630237
MACC1 metastasis associated in colon cancer 1 -0.0629
TXNIP thioredoxin interacting protein -0.0614836
GLIS3 GLIS family zinc finger 3 -0.0606228
KATNBL1 katanin p80 subunit B-like 1 -0.0600751
CP ceruloplasmin (ferroxidase) -0.0586826
PATJ PATJ crumbs cell polarity complex component -0.0581957
ERBIN erbb2 interacting protein -0.0574745
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide -0.0561915
BRIP1 BRCA1 interacting protein C-terminal helicase 1 -0.0560831
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0555386
SLC38A1 solute carrier family 38, member 1 -0.053015
GRAMD2B GRAM domain containing 2B -0.0529851
PRSS23 protease, serine, 23 -0.0525955
CEMIP cell migration inducing protein, hyaluronan binding -0.0522724
F3 coagulation factor III (thromboplastin, tissue factor) -0.0517076
ATOSA atos homolog A -0.0513205
EXT1 exostosin glycosyltransferase 1 -0.0500788
LPP LIM domain containing preferred translocation partner in lipoma -0.0500543
FNDC3B fibronectin type III domain containing 3B -0.049775
SLC6A14 solute carrier family 6 (amino acid transporter), member 14 -0.0486811
ANXA2 annexin A2 -0.0485227
HLA-A major histocompatibility complex, class I, A -0.0479091
SEC31A SEC31 homolog A (S. cerevisiae) -0.0478045
NPEPPS aminopeptidase puromycin sensitive -0.0463787
RICTOR RPTOR independent companion of MTOR, complex 2 -0.04625
LRRFIP1 leucine rich repeat (in FLII) interacting protein 1 -0.0462184
PHLDA1 pleckstrin homology-like domain, family A, member 1 -0.0458599
RNF213 ring finger protein 213 -0.0458329
TXNRD1 thioredoxin reductase 1 -0.0452745
SMURF1 SMAD specific E3 ubiquitin protein ligase 1 -0.0448451
GCC2 GRIP and coiled-coil domain containing 2 -0.0447391
FMN1 formin 1 -0.0445363
BPTF bromodomain PHD finger transcription factor -0.0440508
TMEM87A transmembrane protein 87A -0.0439882
BAZ1A bromodomain adjacent to zinc finger domain, 1A -0.0434401
INHBA inhibin, beta A -0.0433908
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 -0.0433058
PNRC1 proline-rich nuclear receptor coactivator 1 -0.0431658
EIF1 eukaryotic translation initiation factor 1 -0.0431313
ZFAND6 zinc finger, AN1-type domain 6 -0.0430581
IFI16 interferon, gamma-inducible protein 16 -0.0429313
SERPINB1 serpin peptidase inhibitor, clade B (ovalbumin), member 1 -0.0424881
LOC102724023 ES1 protein homolog, mitochondrial -0.0422798
NT5C2 5'-nucleotidase, cytosolic II -0.0420144
MNAT1 MNAT CDK-activating kinase assembly factor 1 -0.0419179
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 -0.0418202
NFAT5 nuclear factor of activated T-cells 5, tonicity-responsive -0.041474
CLDN4 claudin 4 -0.0411726
GRAMD1B GRAM domain containing 1B -0.0410906
CD2AP CD2-associated protein -0.0410221
F11R F11 receptor -0.0407871
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 -0.0403979
NCOA2 nuclear receptor coactivator 2 -0.039912
RAB22A RAB22A, member RAS oncogene family -0.0397531
SERINC1 serine incorporator 1 -0.0394225
ANXA11 annexin A11 -0.0392082
S100A11 S100 calcium binding protein A11 -0.0386297
H3-3B H3.3 histone B -0.0386098
ANK3 ankyrin 3, node of Ranvier (ankyrin G) -0.0385524
HLA-B major histocompatibility complex, class I, B -0.0382917
NIPBL Nipped-B homolog (Drosophila) -0.0379227
VIM vimentin -0.0377626
CCNI cyclin I -0.0367706
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 -0.0366609
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 -0.0365833
ADNP activity-dependent neuroprotector homeobox -0.0365689
POU2F1 POU class 2 homeobox 1 -0.0364699
UBE2H ubiquitin-conjugating enzyme E2H -0.036027
MYO5C myosin VC -0.0358783
PARD3 par-3 family cell polarity regulator -0.0355267
ZMYND8 zinc finger, MYND-type containing 8 -0.03545
RPL35A ribosomal protein L35a -0.0353757
MAST4 microtubule associated serine/threonine kinase family member 4 -0.0351871
SOX4 SRY (sex determining region Y)-box 4 -0.0350771
ZBTB20 zinc finger and BTB domain containing 20 -0.0349196