Amsacrine_SW 900 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Amsacrine perturbation in SW 900 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Amsacrine_SW 900 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
NDRG1 N-myc downstream regulated 1 0.118014
TRIO trio Rho guanine nucleotide exchange factor 0.0927194
FAM13A family with sequence similarity 13, member A 0.0630325
CXCL8 chemokine (C-X-C motif) ligand 8 0.0619836
HILPDA hypoxia inducible lipid droplet-associated 0.0609408
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.060762
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.0581266
STC2 stanniocalcin 2 0.0575346
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 0.0493964
MYOF myoferlin 0.0490606
FLNA filamin A, alpha 0.0481463
LIMCH1 LIM and calponin homology domains 1 0.0481041
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase 0.0463735
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0461413
CRIM1 cysteine rich transmembrane BMP regulator 1 (chordin-like) 0.0451806
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0447213
SLC5A3 solute carrier family 5 (sodium/myo-inositol cotransporter), member 3 0.0435514
PLIN2 perilipin 2 0.0433817
RNF145 ring finger protein 145 0.0426533
VEGFA vascular endothelial growth factor A 0.041876
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.0407819
P4HB prolyl 4-hydroxylase, beta polypeptide 0.0405692
GRB10 growth factor receptor-bound protein 10 0.0403863
SPTBN1 spectrin, beta, non-erythrocytic 1 0.0401004
FLNB filamin B, beta 0.0376306
AHNAK AHNAK nucleoprotein 0.0365823
SFTPA2 surfactant protein A2 0.0362517
PLEC plectin 0.0356558
INTS6 integrator complex subunit 6 0.0351162
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 0.0340414
HIVEP2 human immunodeficiency virus type I enhancer binding protein 2 0.0337857
PTK2 protein tyrosine kinase 2 0.0329193
ERRFI1 ERBB receptor feedback inhibitor 1 0.0327119
APLP2 amyloid beta (A4) precursor-like protein 2 0.0323411
CAPZA2 capping protein (actin filament) muscle Z-line, alpha 2 0.0320248
FOSB FBJ murine osteosarcoma viral oncogene homolog B 0.0304313
EEF2 eukaryotic translation elongation factor 2 0.0302416
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.0302033
RYBP RING1 and YY1 binding protein 0.029821
FMNL2 formin-like 2 0.0294811
SOD2 superoxide dismutase 2, mitochondrial 0.0292215
MACF1 microtubule-actin crosslinking factor 1 0.0268828
FTH1 ferritin, heavy polypeptide 1 0.0267526
LMNA lamin A/C 0.0264296
P4HA1 prolyl 4-hydroxylase, alpha polypeptide I 0.0258933
FOS FBJ murine osteosarcoma viral oncogene homolog 0.0256355
FOSL1 FOS-like antigen 1 0.0255784
RASAL2 RAS protein activator like 2 0.0253795
CTBP2 C-terminal binding protein 2 0.0252636
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 0.0250702
SPTAN1 spectrin, alpha, non-erythrocytic 1 0.0249234
DOCK5 dedicator of cytokinesis 5 0.0246633
UBA6 ubiquitin-like modifier activating enzyme 6 0.0242311
SIRT1 sirtuin 1 0.0233902
EZR ezrin 0.0231969
YAP1 Yes-associated protein 1 0.0231123
ANXA5 annexin A5 0.0230852
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.0230361
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 0.0228156
RIOK3 RIO kinase 3 0.0226099
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C 0.0222198
PDIA4 protein disulfide isomerase family A, member 4 0.0220887
LOXL2 lysyl oxidase-like 2 0.0220641
INSIG2 insulin induced gene 2 0.0218224
MRPS6 mitochondrial ribosomal protein S6 0.0217308
GALNT2 polypeptide N-acetylgalactosaminyltransferase 2 0.0214075
MCL1 myeloid cell leukemia 1 0.0212376
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.0211628
HELZ helicase with zinc finger 0.0210683
ESYT2 extended synaptotagmin-like protein 2 0.0209909
DSTN destrin (actin depolymerizing factor) 0.0209052
IDS iduronate 2-sulfatase 0.0205574
FERMT2 fermitin family member 2 0.0205215
PER1 period circadian clock 1 0.0204919
CD109 CD109 molecule 0.0199552
LYST lysosomal trafficking regulator 0.0197677
XPO1 exportin 1 0.0194593
HOOK2 hook microtubule-tethering protein 2 0.0190787
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2 0.0190426
SEMA4A sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A 0.0189736
SOX9 SRY (sex determining region Y)-box 9 0.018776
MBNL1 muscleblind-like splicing regulator 1 0.0187149
QSOX1 quiescin Q6 sulfhydryl oxidase 1 0.0184674
ENO1 enolase 1, (alpha) 0.0184005
TPM3 tropomyosin 3 0.0183175
CADM1 cell adhesion molecule 1 0.0183117
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 0.0182502
MYO1B myosin IB 0.0180237
IRS2 insulin receptor substrate 2 0.0179982
AEBP2 AE binding protein 2 0.0178523
ANXA2 annexin A2 0.0178292
PDIA3 protein disulfide isomerase family A, member 3 0.017746
MAP4K5 mitogen-activated protein kinase kinase kinase kinase 5 0.017733
FAM193B family with sequence similarity 193, member B 0.0175521
NFE2L1 nuclear factor, erythroid 2-like 1 0.0174303
FXR1 fragile X mental retardation, autosomal homolog 1 0.0173768
TRA2A transformer 2 alpha homolog (Drosophila) 0.0170897
SSBP2 single-stranded DNA binding protein 2 0.0169311
BIRC3 baculoviral IAP repeat containing 3 0.0168672
DDIT4 DNA-damage-inducible transcript 4 0.0168305

decreased expression

Symbol Name Standardized Value
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) -0.378812
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 -0.307831
ITGA1 integrin, alpha 1 -0.122737
FN1 fibronectin 1 -0.0980774
NRG1 neuregulin 1 -0.097652
OSMR oncostatin M receptor -0.0969741
GLIS3 GLIS family zinc finger 3 -0.0942331
TMEM156 transmembrane protein 156 -0.0814229
EXT1 exostosin glycosyltransferase 1 -0.0798445
HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) -0.075616
SQSTM1 sequestosome 1 -0.0739195
SYT1 synaptotagmin I -0.0681308
ETV1 ets variant 1 -0.0632672
ABCA1 ATP-binding cassette, sub-family A (ABC1), member 1 -0.0606949
NAMPT nicotinamide phosphoribosyltransferase -0.0603409
NRP1 neuropilin 1 -0.0588878
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) -0.0547499
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0542645
ASPH aspartate beta-hydroxylase -0.0539892
VCL vinculin -0.0527491
ETV6 ets variant 6 -0.0522031
KLHL5 kelch-like family member 5 -0.0512291
FOXP1 forkhead box P1 -0.0479014
PELO pelota homolog (Drosophila) -0.0470189
TMSB10 thymosin beta 10 -0.0460633
EFNA5 ephrin-A5 -0.0450326
IFI16 interferon, gamma-inducible protein 16 -0.0444818
SMOX spermine oxidase -0.0444169
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5 -0.0435178
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 -0.0433372
CENPF centromere protein F, 350/400kDa -0.0428179
TAS2R14 taste receptor, type 2, member 14 -0.0415696
RUNX2 runt-related transcription factor 2 -0.0404485
MKI67 marker of proliferation Ki-67 -0.0397288
ASPM asp (abnormal spindle) homolog, microcephaly associated (Drosophila) -0.0391821
MCTP2 multiple C2 domains, transmembrane 2 -0.0390416
STAT1 signal transducer and activator of transcription 1, 91kDa -0.0389881
TPT1 tumor protein, translationally-controlled 1 -0.038522
SSH1 slingshot protein phosphatase 1 -0.0385021
HLA-B major histocompatibility complex, class I, B -0.0377053
TFPI tissue factor pathway inhibitor (lipoprotein-associated coagulation inhibitor) -0.0374524
TOP1 topoisomerase (DNA) I -0.0373037
CD44 CD44 molecule (Indian blood group) -0.0371583
TPR translocated promoter region, nuclear basket protein -0.0366182
IFI27 interferon, alpha-inducible protein 27 -0.0360069
HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) -0.035363
NIPBL Nipped-B homolog (Drosophila) -0.0347977
FNBP1 formin binding protein 1 -0.0340386
FAF2 Fas associated factor family member 2 -0.033674
NTN4 netrin 4 -0.0332257
VMP1 vacuole membrane protein 1 -0.0329837
CAB39 calcium binding protein 39 -0.0324832
MAP3K5 mitogen-activated protein kinase kinase kinase 5 -0.0324374
HS2ST1 heparan sulfate 2-O-sulfotransferase 1 -0.0320958
ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa -0.0316115
SOS1 son of sevenless homolog 1 (Drosophila) -0.0314595
GCC2 GRIP and coiled-coil domain containing 2 -0.0306001
AOPEP aminopeptidase O (putative) -0.030575
RRBP1 ribosome binding protein 1 -0.0299813
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) -0.0296587
PTBP3 polypyrimidine tract binding protein 3 -0.0296064
ZMYND8 zinc finger, MYND-type containing 8 -0.0291072
WWTR1 WW domain containing transcription regulator 1 -0.0281422
ITGB5 integrin, beta 5 -0.0280612
ETNK1 ethanolamine kinase 1 -0.0279033
LRP5 low density lipoprotein receptor-related protein 5 -0.0278594
SOX4 SRY (sex determining region Y)-box 4 -0.0275391
NCOA7 nuclear receptor coactivator 7 -0.0274693
ZBTB20 zinc finger and BTB domain containing 20 -0.0274308
NPC1 Niemann-Pick disease, type C1 -0.0269968
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 -0.0267127
UBE2K ubiquitin-conjugating enzyme E2K -0.026684
EREG epiregulin -0.0266084
HPCAL1 hippocalcin-like 1 -0.0264811
ADD3 adducin 3 (gamma) -0.0263083
CCDC91 coiled-coil domain containing 91 -0.0262648
TPM4 tropomyosin 4 -0.0262311
TM9SF3 transmembrane 9 superfamily member 3 -0.0260705
RAB31 RAB31, member RAS oncogene family -0.0256863
DCBLD2 discoidin, CUB and LCCL domain containing 2 -0.0256032
PTPRE protein tyrosine phosphatase, receptor type, E -0.0253128
GPCPD1 glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae) -0.0253076
CDCP1 CUB domain containing protein 1 -0.0250227
MON2 MON2 homolog (S. cerevisiae) -0.0249229
CTNND1 catenin (cadherin-associated protein), delta 1 -0.0248038
ZC3HAV1 zinc finger CCCH-type, antiviral 1 -0.0244637
EGR1 early growth response 1 -0.0241604
SEC31A SEC31 homolog A (S. cerevisiae) -0.0241296
PRRC2C proline-rich coiled-coil 2C -0.0240831
TMEM131 transmembrane protein 131 -0.0237154
S100A6 S100 calcium binding protein A6 -0.0236986
MBD5 methyl-CpG binding domain protein 5 -0.0236915
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) -0.0232187
TMSB4X thymosin beta 4, X-linked -0.0229826
SYNJ2 synaptojanin 2 -0.0229184
FMN1 formin 1 -0.0227086
RTN4 reticulon 4 -0.0226609
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 -0.0226591
SMIM14 small integral membrane protein 14 -0.0226344
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5 -0.0223969