Apalutamide_NCI-H2030 Gene Set

Dataset Tahoe Therapeutics Tahoe 100M Perturbation Atlas
Category transcriptomics
Type cell type
Description Apalutamide perturbation in NCI-H2030 cell line (Tahoe Therapeutics)
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Genes

200 genes differentially expressed following the Apalutamide_NCI-H2030 drug perturbation from the Tahoe Therapeutics Tahoe 100M Perturbation Atlas dataset.

increased expression

Symbol Name Standardized Value
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.158797
THSD4 thrombospondin, type I, domain containing 4 0.103638
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila) 0.0884771
VIM vimentin 0.0690504
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.0590426
LDHA lactate dehydrogenase A 0.0587625
FTH1 ferritin, heavy polypeptide 1 0.0573067
DOCK4 dedicator of cytokinesis 4 0.047293
CMIP c-Maf inducing protein 0.0451216
BICC1 BicC family RNA binding protein 1 0.0434498
RAD51B RAD51 paralog B 0.0433048
FLNB filamin B, beta 0.0418169
MAML3 mastermind-like 3 (Drosophila) 0.0381132
IGFBP3 insulin-like growth factor binding protein 3 0.0355089
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1 0.0352855
KLF6 Kruppel-like factor 6 0.0339929
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like 0.0339238
TRIO trio Rho guanine nucleotide exchange factor 0.0337004
FMNL2 formin-like 2 0.0330691
EFNA5 ephrin-A5 0.0323511
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.0298129
ERO1A endoplasmic reticulum oxidoreductase 1 alpha 0.0291114
PITPNC1 phosphatidylinositol transfer protein, cytoplasmic 1 0.028193
SUPT3H suppressor of Ty 3 homolog (S. cerevisiae) 0.0280029
UBASH3B ubiquitin associated and SH3 domain containing B 0.0276105
SHANK2 SH3 and multiple ankyrin repeat domains 2 0.027429
UTRN utrophin 0.0268975
SAMD4A sterile alpha motif domain containing 4A 0.0263164
IGF2 insulin-like growth factor 2 0.0253379
CAVIN1 caveolae associated protein 1 0.0251908
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1 0.0251384
AGAP1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 0.0251199
PYGL phosphorylase, glycogen, liver 0.0251025
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28 0.0250165
NQO1 NAD(P)H dehydrogenase, quinone 1 0.0248628
TTC28 tetratricopeptide repeat domain 28 0.0242231
EXT1 exostosin glycosyltransferase 1 0.0239544
ANXA2 annexin A2 0.0238805
PTPRM protein tyrosine phosphatase, receptor type, M 0.0235917
PTK2 protein tyrosine kinase 2 0.0231162
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 0.0229654
NEBL nebulette 0.0224779
GLIS3 GLIS family zinc finger 3 0.0216967
ZNF804A zinc finger protein 804A 0.0214
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5 0.0211555
SLC4A7 solute carrier family 4, sodium bicarbonate cotransporter, member 7 0.021113
NF1 neurofibromin 1 0.0207038
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 0.0205199
THBS1 thrombospondin 1 0.0200266
EGFR epidermal growth factor receptor 0.019495
TPM4 tropomyosin 4 0.0193625
AK1 adenylate kinase 1 0.0191643
PRR16 proline rich 16 0.0190184
VDAC1 voltage-dependent anion channel 1 0.0188517
HMGA2 high mobility group AT-hook 2 0.0188508
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.0185184
KLF7 Kruppel-like factor 7 (ubiquitous) 0.0184094
RERE arginine-glutamic acid dipeptide (RE) repeats 0.018356
ZFHX3 zinc finger homeobox 3 0.0180085
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 0.017947
SMURF2 SMAD specific E3 ubiquitin protein ligase 2 0.0178175
CXCL8 chemokine (C-X-C motif) ligand 8 0.0176077
DST dystonin 0.0175914
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A 0.017366
GPRC5A G protein-coupled receptor, class C, group 5, member A 0.0173333
SBF2 SET binding factor 2 0.0172473
NAV3 neuron navigator 3 0.0172225
PTPRJ protein tyrosine phosphatase, receptor type, J 0.0172122
OSMR oncostatin M receptor 0.0169028
AHNAK AHNAK nucleoprotein 0.0166946
EIF4G3 eukaryotic translation initiation factor 4 gamma, 3 0.0165857
SH3KBP1 SH3-domain kinase binding protein 1 0.0160092
RPS4X ribosomal protein S4, X-linked 0.0157603
DCLK2 doublecortin-like kinase 2 0.0157352
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.0156966
RAB7A RAB7A, member RAS oncogene family 0.0156162
GSK3B glycogen synthase kinase 3 beta 0.0153291
ZC3HAV1 zinc finger CCCH-type, antiviral 1 0.0150075
IMMP2L IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae) 0.014917
CITED2 Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 2 0.0148006
ARHGAP26 Rho GTPase activating protein 26 0.0147084
BABAM2 BRISC and BRCA1 A complex member 2 0.0145506
KYNU kynureninase 0.01447
SIPA1L1 signal-induced proliferation-associated 1 like 1 0.0141805
VCL vinculin 0.0141779
ITSN2 intersectin 2 0.0141289
KMT2C lysine (K)-specific methyltransferase 2C 0.0140128
CUX1 cut-like homeobox 1 0.0138602
PSD3 pleckstrin and Sec7 domain containing 3 0.0138099
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 0.0136792
RPL35A ribosomal protein L35a 0.0136552
CTBP2 C-terminal binding protein 2 0.0135149
PCED1B PC-esterase domain containing 1B 0.0135015
SLC35F3 solute carrier family 35, member F3 0.0134922
PTPN14 protein tyrosine phosphatase, non-receptor type 14 0.0134289
RAB31 RAB31, member RAS oncogene family 0.0134049
BCAR3 breast cancer anti-estrogen resistance 3 0.0134047
TNFAIP8 tumor necrosis factor, alpha-induced protein 8 0.0133963
RASSF8 Ras association (RalGDS/AF-6) domain family (N-terminal) member 8 0.013211
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 0.0131387

decreased expression

Symbol Name Standardized Value
PM20D1 peptidase M20 domain containing 1 -0.166953
GRAMD1B GRAM domain containing 1B -0.121586
TM4SF1 transmembrane 4 L six family member 1 -0.0833466
RPS2 ribosomal protein S2 -0.0719641
RPL19 ribosomal protein L19 -0.0714061
PDE4D phosphodiesterase 4D, cAMP-specific -0.0695821
RTN4 reticulon 4 -0.0621067
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) -0.0615494
LANCL1 LanC lantibiotic synthetase component C-like 1 (bacterial) -0.0612902
PTP4A1 protein tyrosine phosphatase type IVA, member 1 -0.0603575
FTL ferritin, light polypeptide -0.0600717
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1 -0.0584947
DENND4A DENN/MADD domain containing 4A -0.0578907
EIF1 eukaryotic translation initiation factor 1 -0.0566627
TPM3 tropomyosin 3 -0.0559102
KIF5B kinesin family member 5B -0.0532703
GAPDH glyceraldehyde-3-phosphate dehydrogenase -0.0502336
POTEF POTE ankyrin domain family, member F -0.0501759
NR4A2 nuclear receptor subfamily 4, group A, member 2 -0.05008
ZFAND3 zinc finger, AN1-type domain 3 -0.0498871
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta -0.0467367
HSPA8 heat shock 70kDa protein 8 -0.0466266
MAP1LC3B microtubule-associated protein 1 light chain 3 beta -0.0464173
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) -0.0461356
MT2A metallothionein 2A -0.0455222
PTMA prothymosin, alpha -0.0453901
DSCAM Down syndrome cell adhesion molecule -0.0434009
KTN1 kinectin 1 (kinesin receptor) -0.0426458
AKAP12 A kinase (PRKA) anchor protein 12 -0.0418504
RPS12 ribosomal protein S12 -0.0404296
RBM39 RNA binding motif protein 39 -0.0397697
PFDN2 prefoldin subunit 2 -0.0390784
RPL4 ribosomal protein L4 -0.0377066
RPS25 ribosomal protein S25 -0.0375858
BCLAF1 BCL2-associated transcription factor 1 -0.0371341
RPL7 ribosomal protein L7 -0.0369985
EIF3H eukaryotic translation initiation factor 3, subunit H -0.0369558
AP2B1 adaptor-related protein complex 2, beta 1 subunit -0.0366679
SLC2A3 solute carrier family 2 (facilitated glucose transporter), member 3 -0.0363125
ARIH1 ariadne RBR E3 ubiquitin protein ligase 1 -0.0347721
MATR3 matrin 3 -0.0336363
SLC38A1 solute carrier family 38, member 1 -0.0328537
MIS18BP1 MIS18 binding protein 1 -0.0325857
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 -0.0325091
CYP24A1 cytochrome P450, family 24, subfamily A, polypeptide 1 -0.0317028
UBR5 ubiquitin protein ligase E3 component n-recognin 5 -0.0309933
RPLP1 ribosomal protein, large, P1 -0.030661
YBX3 Y box binding protein 3 -0.0300956
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 -0.0297353
RPL3 ribosomal protein L3 -0.0296435
PAPOLA poly(A) polymerase alpha -0.0292446
KHDC4 KH domain containing 4, pre-mRNA splicing factor -0.0291591
BTAF1 BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, 170kDa -0.0290127
PSMD14 proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 -0.0286418
RAD21 RAD21 homolog (S. pombe) -0.0282987
CLTC clathrin, heavy chain (Hc) -0.0281955
HNRNPU heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) -0.0281263
STAM signal transducing adaptor molecule (SH3 domain and ITAM motif) 1 -0.0277472
CCL5 chemokine (C-C motif) ligand 5 -0.0273701
NAMPT nicotinamide phosphoribosyltransferase -0.0271139
GOLT1B golgi transport 1B -0.0270125
HSPA5 heat shock 70kDa protein 5 (glucose-regulated protein, 78kDa) -0.026938
SPAG9 sperm associated antigen 9 -0.0268863
ACTR2 ARP2 actin-related protein 2 homolog (yeast) -0.0264983
MARK3 MAP/microtubule affinity-regulating kinase 3 -0.0263598
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa -0.0262615
ZNF207 zinc finger protein 207 -0.0262553
BRD2 bromodomain containing 2 -0.0262287
SETD5 SET domain containing 5 -0.0262256
TPD52 tumor protein D52 -0.0261643
UBE2D3 ubiquitin-conjugating enzyme E2D 3 -0.0257953
CCNL1 cyclin L1 -0.025473
ZNF292 zinc finger protein 292 -0.0254436
UPP1 uridine phosphorylase 1 -0.0252548
PABPC1 poly(A) binding protein, cytoplasmic 1 -0.0252277
GLS2 glutaminase 2 (liver, mitochondrial) -0.0251292
EIF4A1 eukaryotic translation initiation factor 4A1 -0.0248064
WWOX WW domain containing oxidoreductase -0.02469
ERRFI1 ERBB receptor feedback inhibitor 1 -0.0245921
IER3 immediate early response 3 -0.0245398
TFG TRK-fused gene -0.0243435
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha -0.0242763
SEMA3C sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C -0.0241907
UBC ubiquitin C -0.0240874
PKM pyruvate kinase, muscle -0.0239268
MSN moesin -0.0239182
ATP5F1B ATP synthase F1 subunit beta -0.0238111
RHEB Ras homolog enriched in brain -0.0235908
CAMTA1 calmodulin binding transcription activator 1 -0.0235503
QKI QKI, KH domain containing, RNA binding -0.0234061
RYBP RING1 and YY1 binding protein -0.0229632
JAK1 Janus kinase 1 -0.0229255
CFLAR CASP8 and FADD-like apoptosis regulator -0.0229145
ARID1B AT rich interactive domain 1B (SWI1-like) -0.0228958
KMT2E lysine (K)-specific methyltransferase 2E -0.0228143
SRRM1 serine/arginine repetitive matrix 1 -0.022803
RPL5 ribosomal protein L5 -0.0227118
MRTFA myocardin related transcription factor A -0.0226121
BUB3 BUB3 mitotic checkpoint protein -0.0224492
HBS1L HBS1-like translational GTPase -0.0221731